; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy0G002480 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy0G002480
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPMD domain-containing protein
Genome locationGy14Chr0:7109612..7110395
RNA-Seq ExpressionCsGy0G002480
SyntenyCsGy0G002480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]4.48e-10871.03Show/hide
Query:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE
        IE T + M + ED    L  + NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKII TPFER+SSL+PE
Subjt:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE

Query:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESA
        M KIF AIAT+ S+NL  L+ELV+GYFQGVENHNQ+ SS  LQSTKD QL E KGFVKTLR+DENRIL ET+T +RRL RLSAKEAKLEAKLK+VR ES 
Subjt:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESA

Query:  KLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE
        KLSG+I KN++ELKQKQ EISKTCEEIDKL+CA I+GD DAKMLS LRESLE
Subjt:  KLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]6.76e-10871.03Show/hide
Query:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE
        IE T + M + ED    L  + NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKIIRTPFER+SSL+PE
Subjt:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE

Query:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESA
        M KIF AIAT+ S+NL  L+ELV+GYFQGVENHNQ+ SS  LQSTKD QL E KGFVKTLR+DENRIL ET+T +RRL RLSAKEAKLEAKLK+VR ES 
Subjt:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESA

Query:  KLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE
        KLSG+I KN++ELKQKQ EISKTCEEIDKL+CA I+GD DAKML  LRESLE
Subjt:  KLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE

TYK22840.1 uncharacterized protein E5676_scaffold115G00220 [Cucumis melo var. makuwa]4.81e-9667.49Show/hide
Query:  SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPF
        SSLGDH L IE T + M + E    VLS + NSK PIGA  +S  P VIK  PQ+VEG +PIT SEISHFCAD+LISDL+R+  ITLWE+LRQKIIRT F
Subjt:  SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPF

Query:  ERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAK
        ER+S+LE EMHKIFDAI T+ S++L  LRELV GYFQGVENHNQ+HSS  LQSTKD QL + KGFV+ LR+DEN IL +T+  +R L +LSAKEAKLE K
Subjt:  ERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAK

Query:  LKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAP
        LK+V +ES KL GII +N+++LKQKQ+EISKTCEEIDKLECAP
Subjt:  LKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAP

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]2.77e-15293.25Show/hide
Query:  SSLGDHDLHIEDTLESMPNLEDCNVVL----------SYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWEN
        SSLGDHDLHIEDTLESMPNLEDCN+VL          SYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWEN
Subjt:  SSLGDHDLHIEDTLESMPNLEDCNVVL----------SYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWEN

Query:  LRQKIIRTPFERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRL
        LRQKIIRTPFERLSSLEPEMHKIFDAIAT GSDNLIVLRELVNGYFQGVENHNQIHSSF LQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKR LTRL
Subjt:  LRQKIIRTPFERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRL

Query:  SAKEAKLEAKLKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECA
        SAKEAKLEAKLKMVR ESAK SGIIFKNDLELK KQHEISKTCEEIDKLECA
Subjt:  SAKEAKLEAKLKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECA

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]3.27e-16798.85Show/hide
Query:  SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPF
        SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPF
Subjt:  SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPF

Query:  ERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAK
        ERLSSLEPEMHKIFDAIAT+GSDNLIVLRELVNGYFQGVENHNQIHSSF LQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAK
Subjt:  ERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAK

Query:  LKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE
        LKMVR ESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE
Subjt:  LKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE

TrEMBL top hitse value%identityAlignment
A0A5A7SJ85 Uncharacterized protein2.17e-10871.03Show/hide
Query:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE
        IE T + M + ED    L  + NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKII TPFER+SSL+PE
Subjt:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE

Query:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESA
        M KIF AIAT+ S+NL  L+ELV+GYFQGVENHNQ+ SS  LQSTKD QL E KGFVKTLR+DENRIL ET+T +RRL RLSAKEAKLEAKLK+VR ES 
Subjt:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESA

Query:  KLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE
        KLSG+I KN++ELKQKQ EISKTCEEIDKL+CA I+GD DAKMLS LRESLE
Subjt:  KLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE

A0A5A7SJR1 Uncharacterized protein1.50e-9466.67Show/hide
Query:  SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPF
        S LGDH L IE T + M + E    VLS + N K PIGA  +S  P VIK  PQ+VEG +PIT SEISHFCAD+LISDL+R+  ITLWE+LRQKIIRT F
Subjt:  SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPF

Query:  ERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAK
        ER+S+LE EMHKIFDAI T+ S++L  LRELV GYFQGVENHNQ+HSS  LQSTKD QL + KGFV+ LR+DEN IL +T+  +R L +LSAKEAKLE K
Subjt:  ERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAK

Query:  LKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAP
        LK+V +ES KL GII +N+++LKQKQ+EISKTCEEIDKLECAP
Subjt:  LKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAP

A0A5A7U4C3 Uncharacterized protein3.11e-8775.63Show/hide
Query:  LSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHKIFDAIATNGSDNLI
        LS + NSK PIGA I+S CP V K  PQ+V GTEPIT SEISHFCAD+LISDLR++ AITLWE+LRQKIIRTPFER+SSLEPEM KIF AIAT+GS+NL 
Subjt:  LSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHKIFDAIATNGSDNLI

Query:  VLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESAKLSGIIFKNDLELK
         L+E+V+GYFQGVENHNQ+ SS  LQSTKD QL EAKGFVKTLRVD+NRIL ET+  +RRL RLSAKEAKLEAKLK VR ES KLSGII KN++ELK
Subjt:  VLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESAKLSGIIFKNDLELK

A0A5D3C453 Uncharacterized protein3.27e-10871.03Show/hide
Query:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE
        IE T + M + ED    L  + NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKIIRTPFER+SSL+PE
Subjt:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE

Query:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESA
        M KIF AIAT+ S+NL  L+ELV+GYFQGVENHNQ+ SS  LQSTKD QL E KGFVKTLR+DENRIL ET+T +RRL RLSAKEAKLEAKLK+VR ES 
Subjt:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESA

Query:  KLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE
        KLSG+I KN++ELKQKQ EISKTCEEIDKL+CA I+GD DAKML  LRESLE
Subjt:  KLSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLE

A0A5D3DHK0 Uncharacterized protein2.33e-9667.49Show/hide
Query:  SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPF
        SSLGDH L IE T + M + E    VLS + NSK PIGA  +S  P VIK  PQ+VEG +PIT SEISHFCAD+LISDL+R+  ITLWE+LRQKIIRT F
Subjt:  SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPF

Query:  ERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAK
        ER+S+LE EMHKIFDAI T+ S++L  LRELV GYFQGVENHNQ+HSS  LQSTKD QL + KGFV+ LR+DEN IL +T+  +R L +LSAKEAKLE K
Subjt:  ERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAK

Query:  LKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAP
        LK+V +ES KL GII +N+++LKQKQ+EISKTCEEIDKLECAP
Subjt:  LKMVRVESAKLSGIIFKNDLELKQKQHEISKTCEEIDKLECAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTTCTTTAGGTGATCACGACCTACACATCGAAGATACCCTAGAGTCGATGCCGAATCTAGAAGACTGTAACGTTGTACTTTCTTATAATGGGAACTCTAAGGAA
CCTATAGGCGCAAATATTGTGTCTGCTTGTCCTCCTGTGATCAAGGGACCTCCTCAAAAAGTGGAAGGCACAGAGCCTATTACAGTTTCTGAGATTTCTCATTTT
TGTGCTGACAGCTTAATTTCTGACCTCCGACGACAGGCTGCCATAACCTTATGGGAAAACCTACGACAGAAGATCATTCGTACCCCTTTTGAACGACTGAGTAGT
CTTGAACCAGAAATGCATAAGATCTTTGATGCGATTGCGACTAACGGCAGCGACAACCTTATTGTTTTGAGGGAGCTTGTGAATGGTTACTTCCAAGGTGTCGAG
AACCATAATCAAATACATTCCTCATTTCCACTCCAATCAACTAAGGATGTTCAGCTAACGGAGGCAAAAGGTTTTGTGAAGACTCTTCGAGTTGATGAGAATCGT
ATATTAGCAGAGACCAACACTGCTAAACGTCGTCTTACACGACTGTCCGCTAAGGAGGCTAAACTAGAGGCAAAACTAAAGATGGTGCGGGTTGAGTCTGCTAAA
CTTTCTGGAATAATTTTTAAGAACGACCTGGAGCTGAAGCAGAAGCAACATGAGATTTCAAAGACTTGTGAGGAAATTGACAAACTCGAATGTGCCCCGATCGTT
GGAGATATTGATGCTAAAATGCTATCAACACTTCGTGAATCTTTAGAAA
mRNA sequenceShow/hide mRNA sequence
TCTTCTTTAGGTGATCACGACCTACACATCGAAGATACCCTAGAGTCGATGCCGAATCTAGAAGACTGTAACGTTGTACTTTCTTATAATGGGAACTCTAAGGAA
CCTATAGGCGCAAATATTGTGTCTGCTTGTCCTCCTGTGATCAAGGGACCTCCTCAAAAAGTGGAAGGCACAGAGCCTATTACAGTTTCTGAGATTTCTCATTTT
TGTGCTGACAGCTTAATTTCTGACCTCCGACGACAGGCTGCCATAACCTTATGGGAAAACCTACGACAGAAGATCATTCGTACCCCTTTTGAACGACTGAGTAGT
CTTGAACCAGAAATGCATAAGATCTTTGATGCGATTGCGACTAACGGCAGCGACAACCTTATTGTTTTGAGGGAGCTTGTGAATGGTTACTTCCAAGGTGTCGAG
AACCATAATCAAATACATTCCTCATTTCCACTCCAATCAACTAAGGATGTTCAGCTAACGGAGGCAAAAGGTTTTGTGAAGACTCTTCGAGTTGATGAGAATCGT
ATATTAGCAGAGACCAACACTGCTAAACGTCGTCTTACACGACTGTCCGCTAAGGAGGCTAAACTAGAGGCAAAACTAAAGATGGTGCGGGTTGAGTCTGCTAAA
CTTTCTGGAATAATTTTTAAGAACGACCTGGAGCTGAAGCAGAAGCAACATGAGATTTCAAAGACTTGTGAGGAAATTGACAAACTCGAATGTGCCCCGATCGTT
GGAGATATTGATGCTAAAATGCTATCAACACTTCGTGAATCTTTAGAAA
Protein sequenceShow/hide protein sequence
SSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSS
LEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRVESAK
LSGIIFKNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLEX