; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy0G002500 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy0G002500
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPMD domain-containing protein
Genome locationGy14Chr0:7124320..7124887
RNA-Seq ExpressionCsGy0G002500
SyntenyCsGy0G002500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]6.81e-6566.1Show/hide
Query:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE
        IE T + M + ED    L  + NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKII TPFER+SSL+PE
Subjt:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE

Query:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR
        M KIF AIAT+ S+NL  L+ELV+GYFQGVENHNQ+ SS  LQSTKD QL E KGFVKTLR+DENRIL ET+T + R
Subjt:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]1.46e-6873.75Show/hide
Query:  LSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHKIFDAIATNGSDNLI
        LS + NSK PIGA I+S CP V K  PQ+V GTEPIT SEISHFCAD+LISDLR++ AITLWE+LRQKIIRTPFER+SSLEPEM KIF AIAT+GS+NL 
Subjt:  LSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHKIFDAIATNGSDNLI

Query:  VLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR
         L+E+V+GYFQGVENHNQ+ SS  LQSTKD QL EAKGFVKTLRVD+NRIL ET+  + R
Subjt:  VLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]1.07e-6566.67Show/hide
Query:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE
        IE T + M + ED    L  + NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKIIRTPFER+SSL+PE
Subjt:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE

Query:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR
        M KIF AIAT+ S+NL  L+ELV+GYFQGVENHNQ+ SS  LQSTKD QL E KGFVKTLR+DENRIL ET+T + R
Subjt:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]3.70e-11393.16Show/hide
Query:  DHDLHIEDTLESMPNLEDCNVVL----------SYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQK
        DHDLHIEDTLESMPNLEDCN+VL          SYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQK
Subjt:  DHDLHIEDTLESMPNLEDCNVVL----------SYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQK

Query:  IIRTPFERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAK
        IIRTPFERLSSLEPEMHKIFDAIAT GSDNLIVLRELVNGYFQGVENHNQIHSSF LQSTKDVQLTEAKGFVKTLRVDENRILAETNTAK
Subjt:  IIRTPFERLSSLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAK

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]8.93e-11398.35Show/hide
Query:  DHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLS
        DHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLS
Subjt:  DHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLS

Query:  SLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR
        SLEPEMHKIFDAIAT+GSDNLIVLRELVNGYFQGVENHNQIHSSF LQSTKDVQLTEAKGFVKTLRVDENRILAETNTAK R
Subjt:  SLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR

TrEMBL top hitse value%identityAlignment
A0A5A7SJ85 Uncharacterized protein3.30e-6566.1Show/hide
Query:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE
        IE T + M + ED    L  + NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKII TPFER+SSL+PE
Subjt:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE

Query:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR
        M KIF AIAT+ S+NL  L+ELV+GYFQGVENHNQ+ SS  LQSTKD QL E KGFVKTLR+DENRIL ET+T + R
Subjt:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR

A0A5A7SJR1 Uncharacterized protein1.46e-6364.97Show/hide
Query:  DHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLS
        DH L IE T + M + E    VLS + N K PIGA  +S  P VIK  PQ+VEG +PIT SEISHFCAD+LISDL+R+  ITLWE+LRQKIIRT FER+S
Subjt:  DHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLS

Query:  SLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETN
        +LE EMHKIFDAI T+ S++L  LRELV GYFQGVENHNQ+HSS  LQSTKD QL + KGFV+ LR+DEN IL +T+
Subjt:  SLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETN

A0A5A7U4C3 Uncharacterized protein7.06e-6973.75Show/hide
Query:  LSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHKIFDAIATNGSDNLI
        LS + NSK PIGA I+S CP V K  PQ+V GTEPIT SEISHFCAD+LISDLR++ AITLWE+LRQKIIRTPFER+SSLEPEM KIF AIAT+GS+NL 
Subjt:  LSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHKIFDAIATNGSDNLI

Query:  VLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR
         L+E+V+GYFQGVENHNQ+ SS  LQSTKD QL EAKGFVKTLRVD+NRIL ET+  + R
Subjt:  VLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR

A0A5D3C453 Uncharacterized protein5.19e-6666.67Show/hide
Query:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE
        IE T + M + ED    L  + NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKIIRTPFER+SSL+PE
Subjt:  IEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPE

Query:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR
        M KIF AIAT+ S+NL  L+ELV+GYFQGVENHNQ+ SS  LQSTKD QL E KGFVKTLR+DENRIL ET+T + R
Subjt:  MHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLR

A0A5D3DHK0 Uncharacterized protein1.85e-6465.54Show/hide
Query:  DHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLS
        DH L IE T + M + E    VLS + NSK PIGA  +S  P VIK  PQ+VEG +PIT SEISHFCAD+LISDL+R+  ITLWE+LRQKIIRT FER+S
Subjt:  DHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLS

Query:  SLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETN
        +LE EMHKIFDAI T+ S++L  LRELV GYFQGVENHNQ+HSS  LQSTKD QL + KGFV+ LR+DEN IL +T+
Subjt:  SLEPEMHKIFDAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATCACGACCTACACATCGAAGATACCCTAGAGTCGATGCCGAATCTAGAAGACTGTAACGTTGTACTTTCTTATAATGGGAACTCTAAGGAACCTATAGGCGCAAATAT
TGTGTCTGCTTGTCCTCCTGTGATCAAGGGACCTCCTCAAAAAGTGGAAGGCACAGAGCCTATTACAGTTTCTGAGATTTCTCATTTTTGTGCTGACAGCTTAATTTCTG
ACCTCCGACGACAGGCTGCCATAACCTTATGGGAAAACCTACGACAGAAGATCATTCGTACCCCTTTTGAACGACTGAGTAGTCTTGAACCAGAAATGCATAAGATCTTT
GATGCGATTGCGACTAACGGCAGCGACAACCTTATTGTTTTGAGGGAGCTTGTGAATGGTTACTTCCAAGGTGTCGAGAACCATAATCAAATACATTCCTCATTTCCACT
CCAATCAACTAAGGATGTTCAGCTAACGGAGGCAAAAGGTTTTGTGAAGACTCTGCGAGTTGATGAGAATCGTATATTAGCAGAGACCAACACTGCTAAACTAAGAGGCA
AAACTAAAGATGGTGCGG
mRNA sequenceShow/hide mRNA sequence
GATCACGACCTACACATCGAAGATACCCTAGAGTCGATGCCGAATCTAGAAGACTGTAACGTTGTACTTTCTTATAATGGGAACTCTAAGGAACCTATAGGCGCAAATAT
TGTGTCTGCTTGTCCTCCTGTGATCAAGGGACCTCCTCAAAAAGTGGAAGGCACAGAGCCTATTACAGTTTCTGAGATTTCTCATTTTTGTGCTGACAGCTTAATTTCTG
ACCTCCGACGACAGGCTGCCATAACCTTATGGGAAAACCTACGACAGAAGATCATTCGTACCCCTTTTGAACGACTGAGTAGTCTTGAACCAGAAATGCATAAGATCTTT
GATGCGATTGCGACTAACGGCAGCGACAACCTTATTGTTTTGAGGGAGCTTGTGAATGGTTACTTCCAAGGTGTCGAGAACCATAATCAAATACATTCCTCATTTCCACT
CCAATCAACTAAGGATGTTCAGCTAACGGAGGCAAAAGGTTTTGTGAAGACTCTGCGAGTTGATGAGAATCGTATATTAGCAGAGACCAACACTGCTAAACTAAGAGGCA
AAACTAAAGATGGTGCGG
Protein sequenceShow/hide protein sequence
DHDLHIEDTLESMPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHKIF
DAIATNGSDNLIVLRELVNGYFQGVENHNQIHSSFPLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKLRGKTKDGAX