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CsGy0G006130 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy0G006130
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description30S ribosomal protein S3, chloroplastic
Genome locationGy14Chr0:19244897..19245124
RNA-Seq ExpressionCsGy0G006130
SyntenyCsGy0G006130
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM88764.1 ribosomal protein S3 [Lagenaria siceraria]3.07e-1993.33Show/hide
Query:  GSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        GSRKIEELQ+NVQKE NSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  GSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

KAE8648140.1 hypothetical protein Csa_021516 [Cucumis sativus]6.36e-47100Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFISKYMSYFSIIHICSNEILFFPGFHTKAQSN
        DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFISKYMSYFSIIHICSNEILFFPGFHTKAQSN
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFISKYMSYFSIIHICSNEILFFPGFHTKAQSN

YP_009004081.1 ribosomal protein S3 [Cucumis hystrix]1.78e-2197.83Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

YP_009326028.1 ribosomal protein S3 [Citrullus lanatus]3.07e-1993.33Show/hide
Query:  GSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        GSRKIEELQ+NVQKE NSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  GSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

YP_009346519.1 ribosomal protein S3 [Cucumis x hytivus]1.78e-2197.83Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

TrEMBL top hitse value%identityAlignment
A0A1P8C7T5 30S ribosomal protein S3, chloroplastic8.63e-2297.83Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

A0A1X9Q171 30S ribosomal protein S3, chloroplastic8.63e-2297.83Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

A0A218KG80 30S ribosomal protein S3, chloroplastic8.63e-2297.83Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

A0A4Y5RCY7 30S ribosomal protein S3, chloroplastic8.63e-2297.83Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

W8E3G6 30S ribosomal protein S3, chloroplastic8.63e-2297.83Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

SwissProt top hitse value%identityAlignment
A0ZZ73 30S ribosomal protein S3, chloroplastic2.7e-1482.61Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        D  RK+EELQ+NVQKE N  NRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

A4QL57 30S ribosomal protein S3, chloroplastic7.7e-1482.61Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        D  R+IEELQINVQKE N  NRKLNIAITRI NPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

Q09WX9 30S ribosomal protein S3, chloroplastic2.9e-1381.4Show/hide
Query:  RKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        +KIEELQ+N+QKE NS NRKLN+AITRI NPYGHPNILAEFI+
Subjt:  RKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

Q2L946 30S ribosomal protein S3, chloroplastic2.7e-1482.61Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        D  RK+EELQ+NVQKE N  NRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

Q4VZN0 30S ribosomal protein S3, chloroplastic1.0e-1897.83Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS

Arabidopsis top hitse value%identityAlignment
ATCG00800.1 structural constituent of ribosome1.8e-1376.09Show/hide
Query:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        D  R++EELQ+NVQKE N  NRKLNIAITRI NPYG PNILAEFI+
Subjt:  DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGGGTCTCGAAAAATCGAAGAATTACAGATTAATGTACAAAAAGAATTCAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACA
CCCTAATATTCTCGCAGAATTTATATCCAAATACATGTCTTATTTTTCAATAATCCATATTTGCAGCAATGAAATACTCTTCTTCCCCGGTTTCCATACCAAGGCTCAAT
CTAATTAA
mRNA sequenceShow/hide mRNA sequence
GATGGGTCTCGAAAAATCGAAGAATTACAGATTAATGTACAAAAAGAATTCAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACA
CCCTAATATTCTCGCAGAATTTATATCCAAATACATGTCTTATTTTTCAATAATCCATATTTGCAGCAATGAAATACTCTTCTTCCCCGGTTTCCATACCAAGGCTCAAT
CTAATTAA
Protein sequenceShow/hide protein sequence
DGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFISKYMSYFSIIHICSNEILFFPGFHTKAQSN