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CsGy0G006400 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy0G006400
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptiontRNA (Guanine(10)-N2)-methyltransferase homolog
Genome locationGy14Chr0:20773518..20783452
RNA-Seq ExpressionCsGy0G006400
SyntenyCsGy0G006400
Gene Ontology termsGO:0001510 - RNA methylation (biological process)
GO:0006099 - tricarboxylic acid cycle (biological process)
GO:0033512 - L-lysine catabolic process to acetyl-CoA via saccharopine (biological process)
GO:0034470 - ncRNA processing (biological process)
GO:0045252 - oxoglutarate dehydrogenase complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637124.1 hypothetical protein CSA_021500 [Cucumis sativus]3.03e-6393Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
        MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDG GPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKE+   Y +
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
KAE8637127.1 hypothetical protein CSA_021503 [Cucumis sativus]1.81e-6293Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
        MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDG GPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKE+   Y +
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
KAE8645945.1 hypothetical protein Csa_018208 [Cucumis sativus]1.14e-6493Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
        MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKE  + + +
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
KGN44172.2 hypothetical protein Csa_018210 [Cucumis sativus]2.94e-6393Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
        MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDG GPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKE+   Y +
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
KGN44174.2 hypothetical protein Csa_018198 [Cucumis sativus]4.48e-6694Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
        MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKE+   Y +
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN
TrEMBL top hitse value%identityAlignment
A0A1S3BG98 tRNA (Guanine(10)-N2)-methyltransferase homolog2.14e-5998.94Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
        MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDG GPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
A0A5A7TF32 tRNA (Guanine(10)-N2)-methyltransferase-like protein1.51e-5898.94Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
        MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDG GPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
A0A5D3D1Y2 tRNA (Guanine(10)-N2)-methyltransferase-like protein6.29e-6198.94Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
        MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDG GPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
A0A6J1F3J0 tRNA (Guanine(10)-N2)-methyltransferase homolog9.22e-5895.74Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
        MDAEMAFLMANQALAT GKLV+DPFVGTGSILVGAAHFGAMTMGADIDIRVVRDG GPDCNVWSNFKQYGLPPPI+LLRADNNLPPWRPGLKEI
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
A0A6J1ICG5 tRNA (Guanine(10)-N2)-methyltransferase homolog3.30e-5896.81Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
        MDAEMAFLMANQALAT GKLV+DPFVGTGSILVGAAHFGAMTMGADIDIRVVRDG GPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
SwissProt top hitse value%identityAlignment
Q05B63 tRNA (guanine(10)-N2)-methyltransferase homolog2.1e-1441.58Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVV----------RDGCGPDCNVWSNFKQYGLPP-PIALLRADNNLPPWRP
        MDA ++F+MAN        +VFDPFVGTG +L+ +AHFGA   G DID   V          +   GPD N+ +N +QYGL    + +L +D + P WR 
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVV----------RDGCGPDCNVWSNFKQYGLPP-PIALLRADNNLPPWRP

Query:  G
        G
Subjt:  G
Q54QA6 tRNA (guanine(10)-N2)-methyltransferase homolog4.4e-1747.19Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPP-IALLRADNNLPPWR
        MD E++ + AN  L   G  V DPFVGTGS ++ A+HFGA T+G DIDI+ +R     DCN+ +NFK +GL    +  +  DN+ PPWR
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPP-IALLRADNNLPPWR
Q7TNK6 tRNA (guanine(10)-N2)-methyltransferase homolog4.2e-1543.56Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVV----------RDGCGPDCNVWSNFKQYGLPP-PIALLRADNNLPPWRP
        MDA ++F+MAN A      LVFDPFVGTG +L+ +AHFGA   G DID   V          +   GPD N+ +N +QYGL    + +L +D + P WR 
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVV----------RDGCGPDCNVWSNFKQYGLPP-PIALLRADNNLPPWRP

Query:  G
        G
Subjt:  G
Q7Z4G4 tRNA (guanine(10)-N2)-methyltransferase homolog2.7e-1441.58Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVV----------RDGCGPDCNVWSNFKQYGLPP-PIALLRADNNLPPWRP
        MDA ++F+MAN        +VFDPFVGTG +L+  AHFGA   G DID   V          +   GPD N+ +N +QYGL    + +L +D + P WR 
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVV----------RDGCGPDCNVWSNFKQYGLPP-PIALLRADNNLPPWRP

Query:  G
        G
Subjt:  G
Q9CWH5 tRNA (guanine(10)-N2)-methyltransferase homolog1.2e-1442.57Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVV----------RDGCGPDCNVWSNFKQYGLPP-PIALLRADNNLPPWRP
        MDA ++F+M N A      LVFDPFVGTG +L+ +AHFGA   G DID   V          +   GPD N+ +N +QYGL    + +L +D + P WR 
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVV----------RDGCGPDCNVWSNFKQYGLPP-PIALLRADNNLPPWRP

Query:  G
        G
Subjt:  G
Arabidopsis top hitse value%identityAlignment
AT3G26410.1 methyltransferases;nucleic acid binding5.2e-4589.36Show/hide
Query:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI
        MDAEMAFLMANQA ATSGKLV+DPFVGTGSILV AA FGAMTMGADIDIRVVRDG GPDCNVWSNFKQYGLP P+ALLR DNN+PPWR GLKEI
Subjt:  MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTGAAATGGCTTTCTTAATGGCCAACCAAGCATTAGCGACATCTGGAAAACTTGTCTTTGATCCTTTTGTTGGCACTGGGAGCATTCTTGTTGGCGCAGCTCA
TTTTGGAGCAATGACAATGGGGGCAGACATTGACATTAGGGTGGTACGTGATGGTTGTGGCCCTGATTGTAATGTTTGGAGCAACTTCAAGCAGTATGGATTACCACCTC
CAATTGCACTGTTAAGAGCAGATAATAATCTTCCTCCCTGGCGTCCAGGATTGAAGGAGATTTCCTATTTATATTTCAACTAA
mRNA sequenceShow/hide mRNA sequence
AACCCATTTGTTTGTGTGCAACATTCAAATTCCTTTTCTAATTAATTCTACCGTCTTTTTGGCTACATATATTTGGAGTTCATTTTTTGCAACTTCTATAAGTAATCCTT
CTCACCCTACCACTTAAAAATGTTTTACTTGTATTATTTGGTCGACTTTTCTAAATCTTAATGTTTGCAATTTAATAGAATTTTACTTTCATGAGTTGTCTGAAAGTTCT
CACCAGGCACACAAGGGGAGATATGGCGAAAGCAACATCTGTCCGCAGTAGAATGTTTTAATTATTTATTGATGGGATGCTTGTTACAAGCTATAGCATTATATTTGCTA
TATGAGAAATTTCTATATTACTGAGTAAATCATAATAATTCAAAGTACATAACGATGTTTTACATAGGAAATAAATAGACCTCAAAGTAACCTCCACAGGAAAATTCATA
TATGGAAAATACCAAAAAGGAAAATACTAATAATTCATAAACCCTAATTTTCCTTTAACAACTTCCCTCAAACTCAAGGTTCTAGAATCTTGAACTTGAGTTTGCTAAGA
AAACATCTAAATCAAATCAGTAGATCTAGGATAGAACAAAAAACTTATGATGAACCAAACACACAAGAAACTTCTTGGCTAAAGACAAACCCACAAAGAACGAAACGAAG
AACTTCTGAGATAGAAGCATAGATCCTTGTATAGAGATCTATAACAACAAAATCTAGGAAGAACGGAAGAACTTATGGGCAATAACAAAGATCCTCATGGAGAGAGATGT
AATAAATGACAGATGTTGCTGATCACACACAAAATTGAACTAGATTAATCTAAATCGCACTTATCTTGGGCCAACTGCCATGGATGCTGAAATGGCTTTCTTAATGGCCA
ACCAAGCATTAGCGACATCTGGAAAACTTGTCTTTGATCCTTTTGTTGGCACTGGGAGCATTCTTGTTGGCGCAGCTCATTTTGGAGCAATGACAATGGGGGCAGACATT
GACATTAGGGTGGTACGTGATGGTTGTGGCCCTGATTGTAATGTTTGGAGCAACTTCAAGCAGTATGGATTACCACCTCCAATTGCACTGTTAAGAGCAGATAATAATCT
TCCTCCCTGGCGTCCAGGATTGAAGGAGATTTCCTATTTATATTTCAACTAACCGACCTACTGCCTGACTCATTGACCCCTGGCCTTCTCACTAAGTAACTGCCCCTCTC
AATGTCCTGAGTTTAATGTGGAGGAGCAAGCCATTTGTTCCGTTGGGCTAACCAAATCCAAGCCTGGTGTTTTTGTTGAGGCAATACAACATCTTTTAATTCTAGCTACA
CCAGCAGAGGTAATAATTTCCCAACACTGCTTTTTTCCTTTATGTGTTACTTTTGTCTTTTAGACTGGTATACATTGTCTGATCATGCAAAACTCAACAATAATCAAGAC
TTTAAACTGGTCTAAATCGATTGATCATGTAAAGTGACAAAGTCAAAACTAGCACATAGTACCTAGAGCTACTCTGTTGATTTGGCTGGTTTTCTGCACTATATCATTAA
GTTAGGCCACTTGGATGTTGGGACCTCTTGGTTAGAAAATTCTTTCTAACAAGCAGGCTCAACCTCTTCATAAGTCATTCCACCCCTGATTAGC
Protein sequenceShow/hide protein sequence
MDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTMGADIDIRVVRDGCGPDCNVWSNFKQYGLPPPIALLRADNNLPPWRPGLKEISYLYFN