CuGenDBv2

Gene ID	CsGy1G000110
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Rubredoxin-like domain-containing protein
Genome location	Gy14Chr1:96650..97808
RNA-Seq Expression	CsGy1G000110
Synteny	CsGy1G000110
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function)
InterPro domains	IPR024934 - Rubredoxin-like domain IPR024935 - Rubredoxin domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138023.1 uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus]

8.38e-119

100

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

XP_008464376.1 PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo]

1.14e-116

97.09

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

XP_022921625.1 uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]

2.43e-98

86.71

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SASNR SLKSSFISPLR+IPS RKQ   VAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAA-LGIVALVGLYLYLNSAF
        PD YFCPVCGAPKRRFRPYEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA +GIVALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAA-LGIVALVGLYLYLNSAF

XP_022987160.1 uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima]

1.08e-98

85.47

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SASNR SLKSSFISPL +IPS RKQ   VAAA PKFS+RVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
        PD YFCPVCGAPKRRFRPYEQ+V+KNDNEFD RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

XP_023516579.1 uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]

3.23e-100

86.63

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS SASSLSFHLPP PH K+NQEDGG DR SM   SASNR SLKSSFISPLR+IPS RKQ   VAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
        PD YFCPVCGAPKRRFRPYEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA+GI+ALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNF5 Rubredoxin-like domain-containing protein

4.06e-119

100

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

A0A1S3CLS9 uncharacterized protein LOC103502280 isoform X1

5.54e-117

97.09

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

A0A5A7UPF0 Rubredoxin family protein

5.54e-117

97.09

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

A0A6J1JG21 uncharacterized protein LOC111484793 isoform X1

5.23e-99

85.47

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SASNR SLKSSFISPL +IPS RKQ   VAAA PKFS+RVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
        PD YFCPVCGAPKRRFRPYEQ+V+KNDNEFD RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

E5GBM0 Electron transporter

5.54e-117

97.09

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Query:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

SwissProt top hits

e value

%identity

Alignment

O26258 Probable rubredoxin

3.0e-05

39.29

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Query:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPYE
        V++ + Y CR CGYIY+             TPF+ LP+ + CP CGA K+ F+P +
Subjt:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPYE

P04170 Rubredoxin-1

2.7e-06

51.16

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Query:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRFRP
        Q Y+C  CGY Y    +D  PFD+LPD + CPVCG  K +F P
Subjt:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRFRP

P24297 Rubredoxin

5.1e-05

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Query:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRPYE
        ++C+ CGYIY++            T F++LPD + CP+CGAPK  F   E
Subjt:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRPYE

P58992 Rubredoxin-1

1.1e-04

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Query:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPY
        +++C +CGYIY+              PFDKLPD + CPVC  PK +F  +
Subjt:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPY

Q9AL94 Rubredoxin

5.7e-04

39.22

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Query:  YICRDCGYIY-----------NDRTPFDKLPDKYFCPVCGAPKRRFRPYEQ
        Y+C  CGYIY           N  T F+ +PD + CP+CG  K +F P E+
Subjt:  YICRDCGYIY-----------NDRTPFDKLPDKYFCPVCGAPKRRFRPYEQ

Arabidopsis top hits

e value

%identity

Alignment

AT5G17170.1 rubredoxin family protein

1.0e-08

41.94

Show/hide

Query:  ASPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSK
        A P+F  ++   Q     +IC DCG+IY     FD+ PD Y CP C APK+RF  Y+    K
Subjt:  ASPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSK

AT5G51010.1 Rubredoxin-like superfamily protein

2.8e-43

55.56

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Query:  LSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPV
        ++  LPP   Y          R+S+ L   +  L  +SSF+ P   +  L  + S+  +++P+FSMRV+SKQAYICRDCGYIYNDRTPFDKLPD YFCPV
Subjt:  LSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPV

Query:  CGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS
        C APKRRFR Y   VSKN N+ DVRKARKA++Q+DEA+GK LPI  A+G++AL  LY Y+NS
Subjt:  CGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS

Sequences

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CDS sequence

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ATGGCTTCCATTTCAGCTTCTTCTCTCAGTTTCCACCTTCCACCGAAGCCACATTACAAGCTTAACCAGGAAGACGGCGGCACTGATAGGAACTCCATGTTTTTG
GACTCTGCCTCCAACCGCTTATCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGAAGCAAAACTCTGTTGTTGCTGCTGCTTCTCCC
AAGTTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTC
TGTCCTGTCTGTGGTGCTCCTAAGCGACGTTTTAGACCTTACGAGCAAACTGTGAGTAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATC
CAAAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGCTGCTGCACTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGCCTTCTAG

mRNA sequence

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Protein sequence

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MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYF
CPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF

CsGy1G000110 (gene) of Cucumber (Gy14) v2.1 genome