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CsGy1G001025 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G001025
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionMyelin transcription factor 1-like protein
Genome locationGy14Chr1:583720..584446
RNA-Seq ExpressionCsGy1G001025
SyntenyCsGy1G001025
Gene Ontology termsGO:0070125 - mitochondrial translational elongation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057816.1 hypothetical protein E6C27_scaffold274G001000 [Cucumis melo var. makuwa]1.71e-6492.97Show/hide
Query:  MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
        MLTP TATATSAIFVLLSGLC++VFNSDNLMGRWLPILGLLAVA VALMAARATMVAWITVLVLLAFAGNRRRVLVK GRKITADVAMYLASV+VKERGL
Subjt:  MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL

Query:  LAVAFAALFSFLAVLRSTEIYLLSSFSA
        LAVAFAALFSF+AV RSTEI LLSSFSA
Subjt:  LAVAFAALFSFLAVLRSTEIYLLSSFSA

KAG7021425.1 hypothetical protein SDJN02_15150, partial [Cucurbita argyrosperma subsp. argyrosperma]3.31e-4273.6Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N D LMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIYLLS
        L+AVAFAA+ SF AV+RS EI  LS
Subjt:  LLAVAFAALFSFLAVLRSTEIYLLS

KGN63537.2 hypothetical protein Csa_013462 [Cucumis sativus]4.11e-6697.66Show/hide
Query:  MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
        MLTPT ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVV LMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
Subjt:  MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL

Query:  LAVAFAALFSFLAVLRSTEIYLLSSFSA
        LAVAFAALFSFLAVLRSTEI LLSSFSA
Subjt:  LAVAFAALFSFLAVLRSTEIYLLSSFSA

XP_023004957.1 uncharacterized protein LOC111498104 [Cucurbita maxima]1.64e-4273.6Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N D LMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL++V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIYLLS
        L+AVAFAA+ SF+AV+RS EI  LS
Subjt:  LLAVAFAALFSFLAVLRSTEIYLLS

XP_023530771.1 uncharacterized protein LOC111793221 [Cucurbita pepo subsp. pepo]2.33e-4273.6Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N D LMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIYLLS
        L+AVAFAA+ SF+AV+RS EI  LS
Subjt:  LLAVAFAALFSFLAVLRSTEIYLLS

TrEMBL top hitse value%identityAlignment
A0A0A0LNT4 Uncharacterized protein1.42e-6598.36Show/hide
Query:  ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFA
        ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVV LMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFA
Subjt:  ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFA

Query:  ALFSFLAVLRSTEIYLLSSFSA
        ALFSFLAVLRSTEI LLSSFSA
Subjt:  ALFSFLAVLRSTEIYLLSSFSA

A0A0A0LRZ2 Uncharacterized protein6.63e-72100Show/hide
Query:  MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
        MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
Subjt:  MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL

Query:  LAVAFAALFSFLAVLRSTEIYLLSSFSA
        LAVAFAALFSFLAVLRSTEIYLLSSFSA
Subjt:  LAVAFAALFSFLAVLRSTEIYLLSSFSA

A0A5D3BFC5 Uncharacterized protein8.29e-6592.97Show/hide
Query:  MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL
        MLTP TATATSAIFVLLSGLC++VFNSDNLMGRWLPILGLLAVA VALMAARATMVAWITVLVLLAFAGNRRRVLVK GRKITADVAMYLASV+VKERGL
Subjt:  MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGL

Query:  LAVAFAALFSFLAVLRSTEIYLLSSFSA
        LAVAFAALFSF+AV RSTEI LLSSFSA
Subjt:  LAVAFAALFSFLAVLRSTEIYLLSSFSA

A0A6J1F5J3 uncharacterized protein LOC1114410293.75e-4172Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N D LMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL +V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIYLLS
        L+AV FAA+ S +AV+RS EI  LS
Subjt:  LLAVAFAALFSFLAVLRSTEIYLLS

A0A6J1KRU7 uncharacterized protein LOC1114981047.96e-4373.6Show/hide
Query:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG
        M TP T A   S IF+LLSG C +V N D LMGRW+PI+GLL VA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GR+ITADVAMYL++V+VKERG
Subjt:  MLTPTT-ATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERG

Query:  LLAVAFAALFSFLAVLRSTEIYLLS
        L+AVAFAA+ SF+AV+RS EI  LS
Subjt:  LLAVAFAALFSFLAVLRSTEIYLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03730.1 unknown protein1.6e-0641.03Show/hide
Query:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFLAV
        + G +++   A +A  A MV WI+V+VLLAF G  RRVLV + RKIT +V  ++  V++KE   +A   A L  F+ +
Subjt:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFLAV

AT4G03600.1 unknown protein6.5e-0841.18Show/hide
Query:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFLAVLRSTEIY
        + G +++     +A  A MV WI+V+VLLAF G  RRVLV +GRKIT +V  ++  V++KE  ++A   A L  FL + R  + Y
Subjt:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFLAVLRSTEIY

AT4G28330.1 unknown protein1.3e-0536.84Show/hide
Query:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL
        + G+L++A    +A  A +V WI+V+V +AFAG  R+ +V +GRK+T ++A ++  V++KE   +A+  A L  F+
Subjt:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL

AT4G28340.1 unknown protein1.5e-0434.21Show/hide
Query:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL
        + G+L++A    +A  A +V WI+V+V +AF    R+ +V +GRK+T ++A Y+  V++KE   +A+  A +  F+
Subjt:  ILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL

AT5G50175.1 unknown protein2.4e-1047.96Show/hide
Query:  TTATATSAIFVLLSGLCFLVFNS-DNLMGRWLPILGLLAVAVVALM----AARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKE
        TT T +  IF + S        S  N + + L  +G    A ++L+    AARATMVAWITVLVLLAF+G RRRVL + G+ ITADVAM L  V+++E
Subjt:  TTATATSAIFVLLSGLCFLVFNS-DNLMGRWLPILGLLAVAVVALM----AARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGACACCCACGACGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAATTCCGATAATTTAATGGGGCGGTGGCTACCAAT
TCTGGGGTTGTTGGCGGTGGCCGTAGTGGCGTTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCATTCGCTGGAAACCGACGGCGAG
TTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGTCTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGC
TTCCTCGCTGTCCTTCGTTCCACGGAGATCTATCTTCTTTCTTCTTTCTCCGCTTAA
mRNA sequenceShow/hide mRNA sequence
CTTTAAATCAATCAATCAAAATTGAAGATTTAACCTCCAATTTCCTTATATATATATATATATAAACAATATATATAATTGGGAAAGTTTCTCAACACTCTGTACTCTGT
TCACATTCTTCTCTAATCAACACTACAACAATCATGTTGACACCCACGACGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAA
TTCCGATAATTTAATGGGGCGGTGGCTACCAATTCTGGGGTTGTTGGCGGTGGCCGTAGTGGCGTTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGG
TGCTATTGGCATTCGCTGGAAACCGACGGCGAGTTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGT
CTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGCTTCCTCGCTGTCCTTCGTTCCACGGAGATCTATCTTCTTTCTTCTTTCTCCGCTTAACTTCTTCTTTTCTTTCCTTT
TCCTTTTCCGGAGAGATGAAATTTGGGTGAATTTTACCGGTTTTGTAACGGTAAAAATTTATAATTAGGTTTTGGTTTCAAAACACTTACTTTAAAGTTTTAACATCAAC
ACTCAATCCATTTTCTATATGTAGTCTAAAAAGTTAAACCTCTAACTCTTACATTAATTATAATGTA
Protein sequenceShow/hide protein sequence
MLTPTTATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVALMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFS
FLAVLRSTEIYLLSSFSA