CuGenDBv2

Gene ID	CsGy1G005140
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	UPF0426 protein At1g28150, chloroplastic
Genome location	Gy14Chr1:3452746..3455281
RNA-Seq Expression	CsGy1G005140
Synteny	CsGy1G005140
Gene Ontology terms	GO:0043086 - negative regulation of catalytic activity (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0030599 - pectinesterase activity (molecular function) GO:0046910 - pectinesterase inhibitor activity (molecular function)
InterPro domains	IPR040278 - UPF0426 protein

Homology

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GenBank top hits

e value

%identity

Alignment

KGN63981.2 hypothetical protein Csa_013804 [Cucumis sativus]

5.53e-64

100

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Query:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
        FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
Subjt:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG

Query:  SV
        SV
Subjt:  SV

XP_004137400.1 UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]

5.53e-74

100

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Query:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
        FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
Subjt:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG

Query:  SVQEDGPTEIEIE
        SVQEDGPTEIEIE
Subjt:  SVQEDGPTEIEIE

XP_008439829.1 PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo]

4.85e-68

93.81

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Query:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
        FGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNPV DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQG
Subjt:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG

Query:  SVQEDGPTEIEIE
        SVQEDGPTEIEIE
Subjt:  SVQEDGPTEIEIE

XP_022924196.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]

4.28e-55

79.46

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Query:  GEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGS
        G MGK +  N +SI S KKP+R++  RLG +NSTNGI AF FNP+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+ EEVDTQGS
Subjt:  GEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGS

Query:  VQEDGPTEIEIE
        VQEDGPTEIEIE
Subjt:  VQEDGPTEIEIE

XP_038893812.1 UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]

2.68e-65

90.27

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Query:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
        FGEMGKLKGRNH+SILSS KPVR +F RL  NN TNGISAFFFNPV DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EE+DTQG
Subjt:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG

Query:  SVQEDGPTEIEIE
        SVQEDGPTEIEIE
Subjt:  SVQEDGPTEIEIE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LT92 Uncharacterized protein

2.68e-74

100

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Query:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
        FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
Subjt:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG

Query:  SVQEDGPTEIEIE
        SVQEDGPTEIEIE
Subjt:  SVQEDGPTEIEIE

A0A1S3AZP7 UPF0426 protein At1g28150, chloroplastic

2.35e-68

93.81

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Query:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
        FGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNPV DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQG
Subjt:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG

Query:  SVQEDGPTEIEIE
        SVQEDGPTEIEIE
Subjt:  SVQEDGPTEIEIE

A0A5D3BGH6 UPF0426 protein

2.35e-68

93.81

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Query:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG
        FGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNPV DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQG
Subjt:  FGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQG

Query:  SVQEDGPTEIEIE
        SVQEDGPTEIEIE
Subjt:  SVQEDGPTEIEIE

A0A6J1E8W6 UPF0426 protein At1g28150, chloroplastic

2.07e-55

79.46

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Query:  GEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGS
        G MGK +  N +SI S KKP+R++  RLG +NSTNGI AF FNP+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+ EEVDTQGS
Subjt:  GEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGS

Query:  VQEDGPTEIEIE
        VQEDGPTEIEIE
Subjt:  VQEDGPTEIEIE

A0A6J1KGM3 UPF0426 protein At1g28150, chloroplastic

1.70e-54

78.57

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Query:  GEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGS
        G MGK +  N +SI S KKP+R++  RLG NNSTN I AF F P+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+ EEVDTQGS
Subjt:  GEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGS

Query:  VQEDGPTEIEIE
        VQEDGPTEIEIE
Subjt:  VQEDGPTEIEIE

SwissProt top hits

e value

%identity

Alignment

P74786 UPF0426 protein ssl0294

1.8e-06

38.81

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Query:  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK--TVESAGLREEVDTQGSVQEDGPTEIEIE
        PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K    + +G     D   + Q++ P  I+I+
Subjt:  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK--TVESAGLREEVDTQGSVQEDGPTEIEIE

Q8YQ06 UPF0426 protein asl4034

8.3e-04

32.31

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Query:  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQEDGPTEIEIE
        P+ K+ ++ P +F GG  +G+LRL+L +DP+K W+ K          V    + +  GP  I I+
Subjt:  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQEDGPTEIEIE

Q9FZ89 UPF0426 protein At1g28150, chloroplastic

2.0e-18

63.51

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Query:  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGSV--QEDGPTEIEIE
        FN   +P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+  EEVD  G V   ED P +IEIE
Subjt:  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGSV--QEDGPTEIEIE

Arabidopsis top hits

e value

%identity

Alignment

AT1G28150.1 unknown protein

1.4e-19

63.51

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Query:  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGSV--QEDGPTEIEIE
        FN   +P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+  EEVD  G V   ED P +IEIE
Subjt:  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGSV--QEDGPTEIEIE

Sequences

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CDS sequence

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ATGCCCATTTCTACACTCTTCAATTGCTTTCGCTCTTTTCTATTATATTTGCTTCTTATGTCTCTTCTCCGATGTTTTCGATTTTCTTCTTTGATTCTATTGAAGTTTGG
AGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCT
CCGCTTTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAAC
GAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATTGAGAT
TGAATGA

mRNA sequence

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ATCGTATATATTTTCATCGGTGGATGTGTGGAATTAAATCTAATGTAGAAAGAACACTACGGGCATGTGGTTGTTTCTCGAAATGTTTGGTCAATTGTAAGAAGAAATGA
TGACGAATTGAAGCCATTACCTTAATTCCAACGCAAATATCTTCTTCTTCTTCTTCTTCTTCTTCCATCCTTCAATCAATCACAAGCAGCTCTGTTCCATTAGCATCATC
AGAGATTAACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGGTATGCCCATTTCTACACTCTTCAATTGCTTTCGCTCTTTTCTATTATATTTG
CTTCTTATGTCTCTTCTCCGATGTTTTCGATTTTCTTCTTTGATTCTATTGAAGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAA
GAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCTTTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTA
AGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTG
AGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATTGAGATTGAATGATCCCATCATCAATGGATCTAACCTGCTATAGACAATCTTATTTG
TTCCAATAATATAAACTGGAAAAGTGGGAATGAAATGATATTTGATTACTATTACCACACCTCCCTTGATTTCCCTTCGACCTCTTTTTTTCTAGTTTATATTTAGTTTT
TAGTACTTTTTCGACTTCTAAATTTGTGGATTCCGATTAAATTATTTACAAAATAGTGTATTGCTAGAAATTGTGGTTAATTATATAAATTGAAGTTCCTA

Protein sequence

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MPISTLFNCFRSFLLYLLLMSLLRCFRFSSLILLKFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLN
EDPLKEWVKKTVESAGLREEVDTQGSVQEDGPTEIEIE

CsGy1G005140 (gene) of Cucumber (Gy14) v2.1 genome