; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy1G005680 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G005680
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionLYR motif-containing protein 4
Genome locationGy14Chr1:3702646..3703703
RNA-Seq ExpressionCsGy1G005680
SyntenyCsGy1G005680
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5807263.1 putative complex 1 LYR protein [Helianthus annuus]8.02e-4175Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
        MATPS SEIL+LFRSLLR+ARQFPDYNIREY KRRTID+FR N+TLS+ SSI++ ++ G++QL+VAKRQA+VYSLYAPK+KSIMD+ H
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
KAG6607477.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.28e-4689.66Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
        MA PS SEIL+LFRSLLRTARQFPDYNIREY KRRTID+FRENQ+LSD SSISSVYAGG+AQLEVAKRQA+VYSLYAPKVKSIMDVN
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
KGN64034.1 hypothetical protein Csa_014098 [Cucumis sativus]2.48e-53100Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
        MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
XP_022137452.1 LYR motif-containing protein 4 [Momordica charantia]1.01e-4386.21Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
        MATPS SEILSLFRSLLRTARQF DYNIREY KRR ID+FREN++LSD SSISS YAGG+AQLEVAKRQA+VYSLYAPKVKSIMDV 
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
XP_038894896.1 LYR motif-containing protein 4 [Benincasa hispida]7.71e-4890.8Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
        MATPS SE+LSLFRSLLRTARQFPDYNIREY KRRTID+FRENQ+LSDASSISS YAGG+AQLEVAKRQA+VYSLYAPKVKSIMDVN
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
TrEMBL top hitse value%identityAlignment
A0A0A0LST7 Uncharacterized protein1.20e-53100Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
        MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
A0A1S3XFP4 LYR motif-containing protein 43.62e-3972.41Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
        MA+PS  E+L+LFRSLL+TARQFPDYNIREY KRRTID FR+N+ LSD S +++ ++ GRAQLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
A0A251UU63 Putative complex 1 LYR protein3.88e-4175Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
        MATPS SEIL+LFRSLLR+ARQFPDYNIREY KRRTID+FR N+TLS+ SSI++ ++ G++QL+VAKRQA+VYSLYAPK+KSIMD+ H
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
A0A2J6KBZ0 Uncharacterized protein2.96e-3972.09Show/hide
Query:  TPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
        TPS +EI++LFRSLLR+ARQFPDYNIREY KRRTID+FR+N+TLS+ SSI++ +  G++QL+VAKRQA+VYSLYAPK+KSIMD+ H
Subjt:  TPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
A0A6J1C8A4 LYR motif-containing protein 44.91e-4486.21Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
        MATPS SEILSLFRSLLRTARQF DYNIREY KRR ID+FREN++LSD SSISS YAGG+AQLEVAKRQA+VYSLYAPKVKSIMDV 
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVN
SwissProt top hitse value%identityAlignment
B5X5U9 LYR motif-containing protein 4A4.8e-0735.53Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLY
        MA  S ++++SL+R L++ +++FP YN R Y  RR  DSFREN  + +  ++  +    R  L V +RQ  +  +Y
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLY
B5XD90 LYR motif-containing protein 4B1.9e-0835Show/hide
Query:  TSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMD
        T+++LSL+R L++ + +FP YN R Y  RR  D+FR N+++ D   +  +   GR  L++ +RQ  +  +Y P  K+I++
Subjt:  TSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMD
B8JLQ0 LYR motif-containing protein 44.8e-0736.36Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYA
        MA+ S ++++SL+R L++ +++FP YN R Y  RR  D FREN  + +  ++  +    R  L V KRQ  +  LY+
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYA
Q6DCS1 LYR motif-containing protein 48.2e-0732.95Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
        M+  S S++LSL++ +LR +++F  YN R Y  RR  D+FRE + + D   I ++    +  L V +RQ  +  +YA     I    H
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH
Q9HD34 LYR motif-containing protein 41.6e-0737.66Show/hide
Query:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYA
        MA  S +++LSL+R++LR +++F  YN R Y  RR  D+FREN+ + D   I ++    +  L V +RQ  +  LY+
Subjt:  MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYA
Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein5.1e-2058.54Show/hide
Query:  STSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDV
        S+SE+LSL R+LLR  RQFPDYNIREY KRRT+D FR N+ L+D S ++  YA  + QL VA+R   VY  Y PK K+IM+V
Subjt:  STSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCGTCCACCTCTGAGATCCTCTCGCTCTTTCGTTCTCTCCTGCGAACCGCCCGTCAATTTCCTGATTACAACATCAGAGAATACATCAAACGCCGT
ACCATTGATTCTTTCCGAGAAAATCAGACCCTCTCCGACGCTTCATCCATCTCCTCCGTCTACGCTGGCGGCAGAGCTCAGCTCGAGGTTGCCAAGCGCCAGGCC
ATTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCAACCATTGA
mRNA sequenceShow/hide mRNA sequence
CCCTAAGCTCTTCCTCCACACATGGCAACTCCGTCCACCTCTGAGATCCTCTCGCTCTTTCGTTCTCTCCTGCGAACCGCCCGTCAATTTCCTGATTACAACATC
AGAGAATACATCAAACGCCGTACCATTGATTCTTTCCGAGAAAATCAGACCCTCTCCGACGCTTCATCCATCTCCTCCGTCTACGCTGGCGGCAGAGCTCAGCTC
GAGGTTGCCAAGCGCCAGGCCATTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCAACCATTGATTTCCATTTCTTTTTTTTCTTTTTCTT
TTTTTATGGTTCGATGAATTTGTAGTGTTTGACAATTTTTGTGAGGATTGAACTGTAAACTTACGTTCTGTTGTTATTAATTATGAGCAAAGTATTTTCCATCCC
ATCCTGAAATTCTCTTGCGAGTTTAATTCCGAAAGGGAAATTAGGGATTTTTTTTTCCCTTTTCGCCAATTTATCCAGTCGTAGGTATGCATTCCTGGGTTTCTC
TTCTGGGTTTTAATGAAATAATGTCCGATCATCCAATTGAAATTCAGAATGTTAATGAATCATGTTTGGGATATGAACGTTATTACTTTGGAGAAATACTTTGTC
CATTTCAATATTTAACTCAATAAAAAAAATTGGTTGCTTTGAGGTTGAATCTTGCAACTGATCTTTTGCAGGACTCTTATGATTTAGCTGATACCATAATGTTTT
CATACGTATCCTGGAATAGAATTGATTTGCCAGGAACTTATTTCACCTCGTTTGAGCTCATTTCAGCTTGAAAGTATGAAGAATACTTGTTTGCTTAAATTTAAG
TTCTTTATAAAGAAGGCATTGTTGCATCTTTGTTCGTATCACTTTAGACCGATCAGAACTTGGATCATTAAAAATTCCCGTGTTCGAAAATGCACGATTCTAGTT
GATTAACAGTTGGTATACATGGCTCAAGGTGAATTATGCTTGGAACTATTGAATCAGTGCAGTTACTTTCTAGTACTAATGAAGTATTTATTGATCTCAAGTAAA
GGAAAATG
Protein sequenceShow/hide protein sequence
MATPSTSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQTLSDASSISSVYAGGRAQLEVAKRQAIVYSLYAPKVKSIMDVNH