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CsGy1G008100 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G008100
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNADH-ubiquinone reductase complex 1 MLRQ subunit
Genome locationGy14Chr1:5122090..5123423
RNA-Seq ExpressionCsGy1G008100
SyntenyCsGy1G008100
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64280.1 hypothetical protein Csa_013651 [Cucumis sativus]1.00e-62100Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

XP_004152455.2 uncharacterized protein LOC101218501 isoform X2 [Cucumis sativus]1.50e-96100Show/hide
Query:  MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVL
        MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVL
Subjt:  MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVL

Query:  DNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        DNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Subjt:  DNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

XP_008437938.1 PREDICTED: uncharacterized protein LOC103483212 [Cucumis melo]1.94e-6096.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

XP_031736912.1 uncharacterized protein LOC101218501 isoform X1 [Cucumis sativus]1.54e-9498.58Show/hide
Query:  MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVR--VTKENRAAG
        MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVR  VTKENRAAG
Subjt:  MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVR--VTKENRAAG

Query:  VLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        VLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Subjt:  VLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

XP_038893556.1 uncharacterized protein LOC120082448 [Benincasa hispida]9.63e-6195.74Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

TrEMBL top hitse value%identityAlignment
A0A0A0LQT3 Uncharacterized protein4.86e-63100Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

A0A1S3AVT0 uncharacterized protein LOC1034832129.40e-6196.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

A0A5A7UIX5 Uncharacterized protein9.40e-6196.81Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPSS LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRV+KENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

A0A6J1C941 uncharacterized protein LOC1110090928.37e-5791.49Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPS+ +SRWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRV+KENR+AGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

A0A6J1E888 uncharacterized protein LOC1114317082.06e-5792.55Show/hide
Query:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN
        MAPS+ ++RWLRPEVYPLFAAVGVAVGICGFQL+RNICINPEVRVTKENRAAGVLDNFAEGEKY+EHFLRKFVRNKSPEIMPSINNFFTDP+RN
Subjt:  MAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDPNRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein6.5e-2249.4Show/hide
Query:  LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFT
        + RW+RPEVYPL  A+G    +  FQL RN  +NP+ R+ KE+R  G+L+N  EGEKY++H  RK++R + P++MPS+N FF+
Subjt:  LSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFT

AT3G48140.1 B12D protein2.1e-3683.33Show/hide
Query:  SRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP
        SRWLRPEVYPLFAA GVAVGIC F LIRNI  NPEVR TKENRAAG+LDN AEGEKY E+FLRKFVRNK PEIMP +N FFTDP
Subjt:  SRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYSEHFLRKFVRNKSPEIMPSINNFFTDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTTTTTATTGGGCAAATAAAAAATATATATATATATAATCCCGAAATTCTCATCTTCTTCCCCCCACAAACTCTCCGATTCAGCCGCGTCTCAGCCTCTTCGAT
CCGCTTCCTCCGCCGATATTCATCAATGGCTCCGTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCTCTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCT
GTGGATTTCAGTTAATCCGTAACATCTGCATCAATCCTGAAGTCAGAGTTACCAAGGAGAATAGGGCTGCTGGAGTGTTGGATAACTTTGCTGAGGGAGAGAAGTATTCT
GAACATTTCCTGAGGAAATTCGTACGCAACAAGTCCCCAGAAATTATGCCATCAATCAACAACTTTTTCACTGACCCAAATCGAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTTTTTATTGGGCAAATAAAAAATATATATATATATAATCCCGAAATTCTCATCTTCTTCCCCCCACAAACTCTCCGATTCAGCCGCGTCTCAGCCTCTTCGAT
CCGCTTCCTCCGCCGATATTCATCAATGGCTCCGTCCTCCAACCTTAGTCGATGGCTGAGGCCTGAGGTTTACCCTCTTTTCGCGGCGGTAGGAGTGGCCGTCGGAATCT
GTGGATTTCAGTTAATCCGTAACATCTGCATCAATCCTGAAGTCAGAGTTACCAAGGAGAATAGGGCTGCTGGAGTGTTGGATAACTTTGCTGAGGGAGAGAAGTATTCT
GAACATTTCCTGAGGAAATTCGTACGCAACAAGTCCCCAGAAATTATGCCATCAATCAACAACTTTTTCACTGACCCAAATCGAAACTAA
Protein sequenceShow/hide protein sequence
MHFFIGQIKNIYIYNPEILIFFPPQTLRFSRVSASSIRFLRRYSSMAPSSNLSRWLRPEVYPLFAAVGVAVGICGFQLIRNICINPEVRVTKENRAAGVLDNFAEGEKYS
EHFLRKFVRNKSPEIMPSINNFFTDPNRN