; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy1G008730 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G008730
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTranscription termination factor 4
Genome locationGy14Chr1:5470567..5472756
RNA-Seq ExpressionCsGy1G008730
SyntenyCsGy1G008730
Gene Ontology termsGO:0090266 - regulation of mitotic cell cycle spindle assembly checkpoint (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
InterPro domainsIPR026182 - Anaphase-promoting complex subunit 15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152491.1 uncharacterized protein LOC101206898 [Cucumis sativus]3.75e-59100Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
XP_008438807.1 PREDICTED: uncharacterized protein LOC103483797 [Cucumis melo]3.61e-5796.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
XP_018813880.1 uncharacterized protein LOC108985877 [Juglans regia]6.62e-4986.73Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIE--AEDDDADNADESEAEEFEQET
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQP +EELLLAMEE+DFEEKCNEIRKTNSNLVVIGK T DNDKED +  A+DDDADNA+ESE EEFEQET
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIE--AEDDDADNADESEAEEFEQET
XP_022137094.1 uncharacterized protein LOC111008654 [Momordica charantia]4.93e-5594.79Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQET
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKM+ADNDKEDIEAEDDDADN +ESEAEEFEQET
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQET
XP_038894516.1 uncharacterized protein LOC120083062 [Benincasa hispida]2.44e-5594.85Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSN VVIGKM ADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
TrEMBL top hitse value%identityAlignment
A0A0A0LWF0 Uncharacterized protein1.81e-59100Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
A0A1S3AXA5 uncharacterized protein LOC1034837971.75e-5796.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
A0A5A7UJS1 Transcription termination factor 41.75e-5796.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
A0A6J1GSM6 uncharacterized protein LOC1114567621.75e-5796.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
A0A6J1JWJ6 uncharacterized protein LOC1114903241.75e-5796.91Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
        MLQFPAFMTQYPWSTR IPTSFLLPSQWPQPQNEELLLAMEE+DFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNA+ESEAEEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63135.1 unknown protein3.2e-3171.72Show/hide
Query:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKE--DIEAEDDDADNADESEAEEFEQETG
        MLQFP  MTQ+P ST+ IP S+LLP QWPQPQNEE+LLAMEEA+FEEKCNEIRK +  L VIGK   +N++E  D EAEDDDADNA+ES+ EEFEQETG
Subjt:  MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKE--DIEAEDDDADNADESEAEEFEQETG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCAGTTCCCGGCTTTCATGACACAGTATCCTTGGTCTACCAGGAAAATTCCGACGTCGTTTTTACTGCCGTCTCAGTGGCCTCAACCCCAGAACGAAGAGCTACT
GCTCGCCATGGAAGAAGCTGATTTTGAAGAAAAGTGCAATGAAATTAGGAAAACAAACAGCAACCTTGTGGTCATCGGAAAAATGACTGCTGACAATGATAAGGAAGACA
TTGAGGCAGAAGATGATGATGCTGACAATGCTGATGAATCTGAGGCTGAAGAATTTGAGCAGGAAACTGGCTAA
mRNA sequenceShow/hide mRNA sequence
GATTCTGTCTATAATATATATTATTAGTATTTTGTAGAGGTGTTTAGACAATTTTAGGAATACAGTATTCGATTTGATCATCATTAAAATTAAGGATAGGAGATTGAAAA
TACTCAAAAGTTACTTGATTTAGTAGATTGAAGAGAAATAGAGAGCACAGTCAACAGTGGTGGGAAGATTGACGGTGGCCGGAATGGAACGAAATCTTATATATAACAAA
ATTTCATATTTTATCGATTCTTAGTATAGGCGATGATAAGCTGAAACCAGAATAGGGACAGAAATAAACCAGTTGCCAAACACTAGAGATTTTCGAGTTTACAACAGAGC
GAGCCCATTCGGAGTGTCTCCAGTTTCCAGCTCCGGTGAGAAAAATGCTGCAGTTCCCGGCTTTCATGACACAGTATCCTTGGTCTACCAGGAAAATTCCGACGTCGTTT
TTACTGCCGTCTCAGTGGCCTCAACCCCAGAACGAAGAGCTACTGCTCGCCATGGAAGAAGCTGATTTTGAAGAAAAGTGCAATGAAATTAGGAAAACAAACAGCAACCT
TGTGGTCATCGGAAAAATGACTGCTGACAATGATAAGGAAGACATTGAGGCAGAAGATGATGATGCTGACAATGCTGATGAATCTGAGGCTGAAGAATTTGAGCAGGAAA
CTGGCTAAAACTACTTGCATCTTTGTGCCCTTTCTTGCCTTTACTCTTTAAAATCCTCAAATTGCTAGTTTTTTTTAACGATTGTTCTTTGTAAATCTGTCACTTTGAAA
AGCCAGAGTTTTTGTAATCGTTCAATTTGCTACTGTTATACTGTTTCCAATTTTACTTTCAATATGATGTTACAATTATGACATTGAAAGTTGAATGGTGTTACTAATGC
TTGATCAGAAGAATTGTACTCCGTAACTTGTGTGGAC
Protein sequenceShow/hide protein sequence
MLQFPAFMTQYPWSTRKIPTSFLLPSQWPQPQNEELLLAMEEADFEEKCNEIRKTNSNLVVIGKMTADNDKEDIEAEDDDADNADESEAEEFEQETG