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CsGy1G008955 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G008955
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationGy14Chr1:5596351..5596699
RNA-Seq ExpressionCsGy1G008955
SyntenyCsGy1G008955
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050250.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.05e-5088.76Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQQGPTLL+CDNRS IQIAHNDVFHERTKHIENDCHF+RHHLLSNTLLL+ VST EQPADIFTKALPS RF HL TKLKL ATLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

XP_031737953.1 uncharacterized protein LOC116402584 [Cucumis sativus]7.53e-5396.63Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF RHHLLSNTLLL SVSTIEQPADIFTKALPSN+FCHLLTKLKLIATLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

XP_031741718.1 uncharacterized protein LOC116403914 [Cucumis sativus]1.62e-5497.75Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFC LLTKLKL+ATLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

XP_031742303.1 uncharacterized protein LOC116404150 [Cucumis sativus]4.88e-5598.88Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFC LLTKLKLIATLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

XP_031743962.1 uncharacterized protein LOC116404739 [Cucumis sativus]1.12e-5396.63Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQ GPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFC LLTKLKLI TLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

TrEMBL top hitse value%identityAlignment
A0A5A7TDQ6 Putative mitochondrial protein2.60e-4986.52Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST +QPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5A7TIK6 Putative mitochondrial protein2.41e-4986.52Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQQGPTL HCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLSNT+LL+ VST EQPADIFTKALP  RF  L TKLKL ATLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5A7U4U5 Putative mitochondrial protein5.06e-5188.76Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQQGPTLL+CDNRS IQIAHNDVFHERTKHIENDCHF+RHHLLSNTLLL+ VST EQPADIFTKALPS RF HL TKLKL ATLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5D3B8B7 Putative mitochondrial protein2.93e-5086.52Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLS+TLLL+S+ST +QPADIFTKALPS RF  + TKLKL ATLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

A0A5D3CKF4 Putative mitochondrial protein3.18e-4986.52Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        MGVPQQGPTL HCDNRSAIQIAHNDVFHERTKHIENDCHF+RHHLLSNT+LL+ VST EQPADIFTKALP  RF  L TKLKL ATLPP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.6e-1039.29Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLI
        + +  + P  ++ DN+  I IA+N   H+R KHI+   HF R  + +N + L  + T  Q ADIFTK LP+ RF  L  KL L+
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLI

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-0940Show/hide
Query:  LLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRF
        +++CD++SAI ++ N ++H RTKHI+   H++R  +   +L +  +ST E PAD+ TK +P N+F
Subjt:  LLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRF

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.3e-0937.08Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP
        +G+    P +++CDN  A  +  N VFH R KHI  D HF+R+ + S  L +  VST +Q AD  TK L    F +  +K+  +  +PP
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.0e-0937.5Show/hide
Query:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLP
        +G+    P +++CDN  A  +  N VFH R KHI  D HF+R+ + S  L +  VST +Q AD  TK L    F +   K+ +I   P
Subjt:  MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLP

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.3e-1050.75Show/hide
Query:  VPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKAL
        +P   PTLL CDN +AI IA N VFHERTKHIE+DCH VR   +    L  S    ++  D FT+ L
Subjt:  VPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTCCCTCAACAGGGTCCTACCCTCCTCCATTGTGACAATCGTAGTGCCATTCAGATTGCTCACAATGATGTGTTTCATGAACGTACAAAACACATTGAAAATGA
CTGTCACTTTGTTCGTCACCACCTCTTAAGCAACACCCTCCTCTTACGTTCTGTTTCTACTATTGAACAACCTGCGGATATCTTCACCAAAGCCTTGCCATCTAATCGAT
TTTGTCACTTACTTACCAAACTCAAGTTGATCGCTACTCTACCACCTTGA
mRNA sequenceShow/hide mRNA sequence
CTTATATGGCTTCGGTGGCTCCTTGCCGATATGGGTGTCCCTCAACAGGGTCCTACCCTCCTCCATTGTGACAATCGTAGTGCCATTCAGATTGCTCACAATGATGTGTT
TCATGAACGTACAAAACACATTGAAAATGACTGTCACTTTGTTCGTCACCACCTCTTAAGCAACACCCTCCTCTTACGTTCTGTTTCTACTATTGAACAACCTGCGGATA
TCTTCACCAAAGCCTTGCCATCTAATCGATTTTGTCACTTACTTACCAAACTCAAGTTGATCGCTACTCTACCACCTTGAGTTTGAGGGAGGGTATTAATGTAAATAAAG
TAGGCTTAGTTAATTTGGG
Protein sequenceShow/hide protein sequence
MGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCHLLTKLKLIATLPP