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CsGy1G009170 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G009170
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationGy14Chr1:5729774..5732895
RNA-Seq ExpressionCsGy1G009170
SyntenyCsGy1G009170
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652616.1 hypothetical protein Csa_013594 [Cucumis sativus]1.64e-4597.26Show/hide
Query:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        +DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPK RWFCCG
Subjt:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_004152507.2 protein NOI4 [Cucumis sativus]1.11e-91100Show/hide
Query:  MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG
        MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG
Subjt:  MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG

Query:  TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]1.19e-4793.42Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQD+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTG AANMVP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_008439265.1 PREDICTED: RPM1-interacting protein 4 isoform X2 [Cucumis melo]4.49e-4592.11Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MAS D+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTG AANMVP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_038894676.1 protein NOI4 isoform X1 [Benincasa hispida]3.97e-4692.11Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTGTAAN VPQ+ +EPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

TrEMBL top hitse value%identityAlignment
A0A0A0LRE5 AvrRpt-cleavage domain-containing protein5.38e-92100Show/hide
Query:  MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG
        MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG
Subjt:  MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG

Query:  TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A1S3AYE6 RPM1-interacting protein 4 isoform X22.18e-4592.11Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MAS D+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTG AANMVP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A1S3AZ04 RPM1-interacting protein 4 isoform X15.75e-4893.42Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQD+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTG AANMVP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A6J1GRZ4 RPM1-interacting protein 4-like1.18e-4081.58Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MA QDKGR LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A6J1K4F5 RPM1-interacting protein 4-like1.95e-3980.26Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MA QDKG  LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

SwissProt top hitse value%identityAlignment
O22633 Protein NOI47.3e-1561.11Show/hide
Query:  DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKRWFCC
        DKGR LPKFG+WDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P PKK W CC
Subjt:  DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKRWFCC

Q8GYN5 RPM1-interacting protein 42.5e-0741.33Show/hide
Query:  SDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKT----TGTAANMVPQERNEPVFNNES
        S P+P       S +K   +PKFGDWD NNP+SA+G+T IFNK R E+ +    +G++     Q    P  NN S
Subjt:  SDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKT----TGTAANMVPQERNEPVFNNES

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein2.3e-1657.75Show/hide
Query:  DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCC
        DKGR LPKFG+WDVN+P+SAEGFTVIFNKARNEKK  G + +     ++EP +N         P K+WFCC
Subjt:  DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCC

AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein1.3e-1447.13Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTA-----ANMVPQERNEPVFNNES--------YPQYPPPKKRWFC
        MA+ ++ R LPKFG+WD  NP SAEGFTVIFNKAR++KKT  TA     + + P    EP  NN +        + Q P  KK+W C
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTA-----ANMVPQERNEPVFNNES--------YPQYPPPKKRWFC

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.8e-1357.97Show/hide
Query:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKR
        +DKGR LPKFG+WDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P P K+
Subjt:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKR

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein4.0e-1660.27Show/hide
Query:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKRWFCC
        +DKGR LPKFG+WDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P PKK W CC
Subjt:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKRWFCC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein5.2e-1653.25Show/hide
Query:  SQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKT---TGTAANMV--PQERNEPVFNNESYPQYPPPKKRWFC
        +++KG+ LPKFG+WDVNNPASAEGFTVIF+KA +EKKT   +G   N +  PQ       NN    Q P  K +WFC
Subjt:  SQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKT---TGTAANMV--PQERNEPVFNNESYPQYPPPKKRWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGACGTGCAACCGTCGTTAACAATCTCAACTGTCGCTCTCGTAACAAACTATTGTGTGTTACTGTTGACAAATTTGTCCTTTTCCATCCTGTATTGCTCGCACTC
TCTTTTTTCCCTTTCCGTTTTTGGTCTTCTCCTCTCCGATCCACGGCCCTTTCGTCCTGCAATCATGGCATCGCAGGACAAGGGTCGTGCATTGCCAAAGTTCGGTGATT
GGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAGACCACTGGAACTGCTGCCAATATGGTTCCTCAAGAAAGA
AATGAACCTGTCTTCAACAATGAGAGTTACCCTCAGTATCCTCCACCCAAGAAGAGGTGGTTTTGCTGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
GGGAAGAATTTATATTTATATGGAGGGTTCATAGAGATAATGAGCGACGTGCAACCGTCGTTAACAATCTCAACTGTCGCTCTCGTAACAAACTATTGTGTGTTACTGTT
GACAAATTTGTCCTTTTCCATCCTGTATTGCTCGCACTCTCTTTTTTCCCTTTCCGTTTTTGGTCTTCTCCTCTCCGATCCACGGCCCTTTCGTCCTGCAATCATGGCAT
CGCAGGACAAGGGTCGTGCATTGCCAAAGTTCGGTGATTGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAG
ACCACTGGAACTGCTGCCAATATGGTTCCTCAAGAAAGAAATGAACCTGTCTTCAACAATGAGAGTTACCCTCAGTATCCTCCACCCAAGAAGAGGTGGTTTTGCTGTGG
TTGAAGCCACAGTGGTTTCGGGATCTTGAATTTGTCTCATCTATTGTGAAAGACCGTAAAATTTTGAAGTCTCAACATATTGACTCATACCTTTCTTTCTTCCCTTTTCA
CTTTCATGCTATCATAATTTATAGCACATGGTACTCAGCTTATTTATCATGTAATACAGGATGGAAAAAGGCAAATTACATTGTCAAAATCTCGTTTCAATTTCATGGCA
TTCCTTTATCTCTATCATTCGTCAAAATGAATTGACCCTGTTAAAGTAAAATCGAATCGACCCTGTCCAAGTAAGGCTGCAAATGTAAAGAAAGAAAAGAGATGCTTTGG
TTGAAATAGTCTAAAGCAAAAGCATCATTACATCTGTGCAGTGTATAGTCAGGTGACATGACACTCACAAGTTGATCAAGAAATCCCCAGATAAGATTGTATCTTAAAAG
CTACAAGATTCTAGCCACTGTGTGTATTAGTCAATACATGAGAGAAATTCAAGTATAATTTACATTTTTCCTTTGTTCAACGTAAATTATAGAAAATAAGTGCCATCTTT
TGAAAAGCTTATGGCAGCTCAACCCGAAGAAAACGAGTTGAATATATCCTCATCCCAAACAAATGCTCCATGAAAAACCCTATATCTAGGAGTCCTCTCTGCATAAACTT
CTTATGCAGACTGCTCGACTGTGGCACTGTTTCCGCTCGCTCCTCCGGCCATTTCAGCCCCTTCTGCAGTGCTAAAGTTGCCGTAGTGAGGTTGCTGTTCAAGCTCGCCC
ACAGTTGAAGAAGAAGGAAGAAAAGGATGGTCAAACTTGCAAGATGGCCCAAATTTGCAGATGCCATAGCGTCTATAATACGTGCATACGTTCTGATCCTGAATACCACA
CAAAAATTGAGAAAATGTAAAGCAAATCAAGGGAAGAGAAGCAAAATGAGGGATGCACAAAGCATGCAAATAAATAGACTACAAAATTCACAGATGCAATGTAAAATAAT
TTACAATTTCTTCTAAAGAAATTTATTAAATTTGAGTAAATTAATTTTTCTAGTATAAACATGTTTTATTTAGGTCCCTTGGACGAAGTTCTCTCTACATAAAAGTCTTT
CACAAACAACCAGGAAGTTAGGACAAGCTTACAGGTCTCAAGGGCAGGCCTTTATCATTGAGAGTGCAAGTCGGTAACTTAGGGTTCCGATTCTTCGGATGGTGATATTT
GCAAAGAGATTTAAATTTACAATCCCCCGTCTTTAGAAAGTAACTGCATTCAGGTTGACCAGGTCGTTCAGGATATTCATCTACCTGTTGATGAGAAGAATAGAGATCCG
TCTCAGGTGCTATATTGTTCACGACATATGCTGGAGGTGGAAGCACGCTGATTTCTGATGGATATATGGGAGCCT
Protein sequenceShow/hide protein sequence
MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQER
NEPVFNNESYPQYPPPKKRWFCCG