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CsGy1G011260 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G011260
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionE3 ubiquitin-protein ligase RGLG3-like
Genome locationGy14Chr1:7028195..7031421
RNA-Seq ExpressionCsGy1G011260
SyntenyCsGy1G011260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648278.1 hypothetical protein Csa_017790 [Cucumis sativus]1.06e-55100Show/hide
Query:  MAITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTAASTISQALHAILF
        MAITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTAASTISQALHAILF
Subjt:  MAITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTAASTISQALHAILF

KGN47249.2 hypothetical protein Csa_017032 [Cucumis sativus]6.51e-4890.8Show/hide
Query:  ITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTAASTISQALHAILF
        +  Q     RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTAASTISQALHAILF
Subjt:  ITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTAASTISQALHAILF

XP_031736594.1 uncharacterized protein LOC116402038 [Cucumis sativus]2.18e-3886.84Show/hide
Query:  ITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTAAS
        +  Q     RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT +S
Subjt:  ITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTAAS

XP_031737977.1 E3 ubiquitin-protein ligase RGLG4-like isoform X2 [Cucumis sativus]6.77e-4288.61Show/hide
Query:  AHGKMAITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT
        +H  ++I  +LMATVRRESVYGKSAGPLPPPPEVINYDNAV NQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT
Subjt:  AHGKMAITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT

XP_031738448.1 E3 ubiquitin-protein ligase RGLG3-like [Cucumis sativus]1.88e-3889.04Show/hide
Query:  ITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT
        +  Q     RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT
Subjt:  ITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT

TrEMBL top hitse value%identityAlignment
A0A1S3CHE4 E3 ubiquitin-protein ligase RGLG1 isoform X27.72e-3278.75Show/hide
Query:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT
        M I  Q  AT+     +RES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHT
Subjt:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT

A0A1S3CHF5 E3 ubiquitin-protein ligase RGLG1 isoform X11.06e-3178.75Show/hide
Query:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT
        M I  Q  AT+     +RES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHT
Subjt:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT

A0A5A7SGD8 E3 ubiquitin-protein ligase RGLG1 isoform X16.69e-3378.75Show/hide
Query:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT
        M I  Q  AT+     +RES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHT
Subjt:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT

A0A5D3CAU1 E3 ubiquitin-protein ligase RGLG1 isoform X16.52e-3378.75Show/hide
Query:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT
        M I  Q  AT+     +RES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSESVCPICLTNPKDMAFACGHT
Subjt:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT

A0A6J1KVY2 E3 ubiquitin-protein ligase RGLG3-like isoform X21.38e-2772.5Show/hide
Query:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT
        M I  Q  AT+     +RESVY KSAGP+PPPPEVIN+DNAVANQ L  A AE+ SSSSESVCPIC TNPKDMAFACGHT
Subjt:  MAITLQLMATV-----RRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHT

SwissProt top hitse value%identityAlignment
Q8RX26 E3 ubiquitin-protein ligase RGLG33.9e-1264.91Show/hide
Query:  PLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVCPICLTNPKDMAFACGHT
        PLPPPPEVI  DNA   V NQ+ E A K+++ + S+  VCPICLTNPKDMAF+CGHT
Subjt:  PLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVCPICLTNPKDMAFACGHT

Arabidopsis top hitse value%identityAlignment
AT5G14420.1 RING domain ligase28.0e-0570.83Show/hide
Query:  SSSSESVCPICLTNPKDMAFACGH
        S+S   +CPICL+NPKDMAF CGH
Subjt:  SSSSESVCPICLTNPKDMAFACGH

AT5G14420.3 RING domain ligase28.0e-0570.83Show/hide
Query:  SSSSESVCPICLTNPKDMAFACGH
        S+S   +CPICL+NPKDMAF CGH
Subjt:  SSSSESVCPICLTNPKDMAFACGH

AT5G14420.4 RING domain ligase28.0e-0570.83Show/hide
Query:  SSSSESVCPICLTNPKDMAFACGH
        S+S   +CPICL+NPKDMAF CGH
Subjt:  SSSSESVCPICLTNPKDMAFACGH

AT5G63970.1 Copine (Calcium-dependent phospholipid-binding protein) family2.7e-1364.91Show/hide
Query:  PLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVCPICLTNPKDMAFACGHT
        PLPPPPEVI  DNA   V NQ+ E A K+++ + S+  VCPICLTNPKDMAF+CGHT
Subjt:  PLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVCPICLTNPKDMAFACGHT

AT5G63970.2 Copine (Calcium-dependent phospholipid-binding protein) family2.7e-1364.91Show/hide
Query:  PLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVCPICLTNPKDMAFACGHT
        PLPPPPEVI  DNA   V NQ+ E A K+++ + S+  VCPICLTNPKDMAF+CGHT
Subjt:  PLPPPPEVINYDNA---VANQILENA-KAEKHSSSSESVCPICLTNPKDMAFACGHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTAACTTCCATTCTACTTCAATATCCATAATCAAACAAACCTATCAAAATGGCCATTACTCTACAGCTCATGGCAAAATGGCCATTACTCTACAGCTC
ATGGCCACTGTGAGGAGAGAATCTGTATATGGAAAAAGTGCAGGGCCACTTCCTCCTCCTCCTGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTG
GAGAATGCAAAAGCTGAAAAACATAGTTCCTCATCTGAATCGGTCTGTCCCATATGCCTCACAAACCCAAAGGACATGGCTTTTGCATGTGGTCATACAGCTGCT
TCAACTATTTCACAAGCATTGCATGCTATTTTATTTTAG
mRNA sequenceShow/hide mRNA sequence
TGTCGCTCCTTCCAAATCCGTCCATCGGATTTCTTCGACCTCTCGAACTCGGCTGGCGTCAAGGCATTGGAGCTTCGCATTGGCTAGGGTGAAACCCCCCTTGAT
GGAGATCGGGGTGGAGTCATCTTTCAGTATCCATTAAACGAAAGGTATTTTGTTTACTATATTGATATATTTTTGTTTATGATGTTGGGTTGATGAAATTTAACT
TCCATTCTACTTCAATATCCATAATCAAACAAACCTATCAAAATGGCCATTACTCTACAGCTCATGGCAAAATGGCCATTACTCTACAGCTCATGGCCACTGTGA
GGAGAGAATCTGTATATGGAAAAAGTGCAGGGCCACTTCCTCCTCCTCCTGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTGGAGAATGCAAAAG
CTGAAAAACATAGTTCCTCATCTGAATCGGTCTGTCCCATATGCCTCACAAACCCAAAGGACATGGCTTTTGCATGTGGTCATACAGCTGCTTCAACTATTTCAC
AAGCATTGCATGCTATTTTATTTTAG
Protein sequenceShow/hide protein sequence
MKFNFHSTSISIIKQTYQNGHYSTAHGKMAITLQLMATVRRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESVCPICLTNPKDMAFACGHTAA
STISQALHAILF