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CsGy1G012087 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G012087
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionpentatricopeptide repeat-containing protein At2g20710, mitochondrial-like
Genome locationGy14Chr1:7597441..7597710
RNA-Seq ExpressionCsGy1G012087
SyntenyCsGy1G012087
Gene Ontology termsGO:0009058 - biosynthetic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR019734 - Tetratricopeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056984.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.76e-4288.76Show/hide
Query:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER
        +V VRGKFSV+SWCYLASGYLQKDQLPQAVETLKKAASLCPSELNY KEILAAF DGKQD EE EKVVNLLREKD+ +PARAHDILVER
Subjt:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER

KAE8652714.1 hypothetical protein Csa_014150 [Cucumis sativus]1.37e-55100Show/hide
Query:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER
        MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER
Subjt:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER

XP_008442434.1 PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo]2.26e-4388.76Show/hide
Query:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER
        +V VRGKFSV+SWCYLASGYLQKDQLPQAVETLKKAASLCPSELNY KEILAAF DGKQD EE EKVVNLLREKD+ +PARAHDILVER
Subjt:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER

XP_011653157.2 pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X1 [Cucumis sativus]3.74e-4288.51Show/hide
Query:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILV
        MV VR KFSV+SWCYLASGYLQKDQLPQAVETLK AAS+CPS LNY KEILAAFLDGKQD EETEKVVNLLREKDDSHPARAHD +V
Subjt:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILV

XP_031744923.1 pentatricopeptide repeat-containing protein At2g20710, mitochondrial isoform X2 [Cucumis sativus]7.27e-4388.51Show/hide
Query:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILV
        MV VR KFSV+SWCYLASGYLQKDQLPQAVETLK AAS+CPS LNY KEILAAFLDGKQD EETEKVVNLLREKDDSHPARAHD +V
Subjt:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILV

TrEMBL top hitse value%identityAlignment
A0A0A0LSC2 TPR_REGION domain-containing protein1.44e-4193.75Show/hide
Query:  VKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER
        V ++C  ASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER
Subjt:  VKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER

A0A0A0LV44 Uncharacterized protein1.81e-4288.51Show/hide
Query:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILV
        MV VR KFSV+SWCYLASGYLQKDQLPQAVETLK AAS+CPS LNY KEILAAFLDGKQD EETEKVVNLLREKDDSHPARAHD +V
Subjt:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILV

A0A1S3B572 pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like1.09e-4388.76Show/hide
Query:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER
        +V VRGKFSV+SWCYLASGYLQKDQLPQAVETLKKAASLCPSELNY KEILAAF DGKQD EE EKVVNLLREKD+ +PARAHDILVER
Subjt:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER

A0A5A7UP59 Pentatricopeptide repeat-containing protein3.75e-4288.76Show/hide
Query:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER
        +V VRGKFSV+SWCYLASGYLQKDQLPQAVETLKKAASLCPSELNY KEILAAF DGKQD EE EKVVNLLREKD+ +PARAHDILVER
Subjt:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER

A0A5D3DSH1 Pentatricopeptide repeat-containing protein1.09e-4388.76Show/hide
Query:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER
        +V VRGKFSV+SWCYLASGYLQKDQLPQAVETLKKAASLCPSELNY KEILAAF DGKQD EE EKVVNLLREKD+ +PARAHDILVER
Subjt:  MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACTGTAAGAGGCAAGTTTTCGGTCAAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCAGAAGGATCAACTACCTCAGGCAGTTGAGACACTGAAGAAAGCAGC
CAGTTTGTGTCCATCAGAACTGAACTACGCCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGAGGAAGAAACTGAGAAAGTGGTTAATTTGTTGAGGGAAA
AAGATGACTCTCATCCTGCTCGTGCTCATGATATATTGGTAGAGCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGACTGTAAGAGGCAAGTTTTCGGTCAAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCAGAAGGATCAACTACCTCAGGCAGTTGAGACACTGAAGAAAGCAGC
CAGTTTGTGTCCATCAGAACTGAACTACGCCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGAGGAAGAAACTGAGAAAGTGGTTAATTTGTTGAGGGAAA
AAGATGACTCTCATCCTGCTCGTGCTCATGATATATTGGTAGAGCGATGA
Protein sequenceShow/hide protein sequence
MVTVRGKFSVKSWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPARAHDILVER