; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy1G012110 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G012110
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein LOL2
Genome locationGy14Chr1:7609757..7613495
RNA-Seq ExpressionCsGy1G012110
SyntenyCsGy1G012110
Gene Ontology termsGO:0009617 - response to bacterium (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR005735 - Zinc finger, LSD1-type
IPR040319 - LSD1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146601.1 protein LOL2 isoform X2 [Cucumis sativus]1.60e-9299.24Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSS DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

XP_008442535.1 PREDICTED: protein LOL2 isoform X3 [Cucumis melo]4.56e-9096.97Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS ADMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

XP_008442544.1 PREDICTED: protein LOL2 isoform X4 [Cucumis melo]1.22e-8796.21Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS  DMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

XP_011653178.1 protein LOL2 isoform X1 [Cucumis sativus]5.99e-95100Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

XP_022927005.1 protein LOL2 [Cucurbita moschata]2.76e-8491.67Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        M++HEIEKDEDDGPPPGWEPITP LP PPP  LSS DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVN+VLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCT VTEIGVHNRRPPWSV QGQAAPPTN VQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXE3 Uncharacterized protein7.73e-9399.24Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSS DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

A0A1S3B6K2 protein LOL2 isoform X32.21e-9096.97Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS ADMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

A0A1S3B6Q2 protein LOL2 isoform X45.89e-8896.21Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS  DMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

A0A5A7UQS3 Protein LOL2 isoform X45.89e-8896.21Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS  DMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

A0A5D3DST5 Protein LOL2 isoform X32.21e-9096.97Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS ADMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCS

Query:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

SwissProt top hitse value%identityAlignment
O65426 Protein LOL24.8e-3555.56Show/hide
Query:  EIEKDEDDGPPPGWEPITPSLPL--------PPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASS
        E E++E++GPPPGWE      P+        P P  +   + AQMVCG+CRRLL YL+G+++V+CS C TVN VLEA++VGQV C +C +LLMYPYGA +
Subjt:  EIEKDEDDGPPPGWEPITPSLPL--------PPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVHQG
        VRCSSC SVT+I  +N+RPPWS  QG
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVHQG

P94077 Protein LSD15.7e-2043.48Show/hide
Query:  LPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRRP
        +P PPPP     DMA ++CG CR +L Y +GA  V+CSCC T N V           + +V Q+ CG C   LMYPYGASSV+C+ C  VT + + N R 
Subjt:  LPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRRP

Query:  PWSVHQ--GQAAPPT
        P   ++  G A PP+
Subjt:  PWSVHQ--GQAAPPT

Q0J7V9 Protein LSD15.7e-2057.53Show/hide
Query:  DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        +MAQ+VCG C  LL Y++GA  VQCSCC TVN  +EA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

Q704V3 Protein LOL56.2e-2755.66Show/hide
Query:  PGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRRP
        P  +   P +P PP P L+  ++ QMVCG+CR LL Y +GA YV C+CC T+N+VLEAHEVG+V CG CA LLMYP+GA +V+CS C  VTEIG  N R 
Subjt:  PGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRRP

Query:  PWSVHQ
          S+ Q
Subjt:  PWSVHQ

Q93ZB1 Protein LOL11.5e-2056.79Show/hide
Query:  PPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        PPP     +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

Arabidopsis top hitse value%identityAlignment
AT1G32540.1 lsd one like 11.1e-2156.79Show/hide
Query:  PPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        PPP     +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

AT1G32540.2 lsd one like 11.1e-2156.79Show/hide
Query:  PPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        PPP     +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

AT1G32540.3 lsd one like 11.1e-2156.79Show/hide
Query:  PPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        PPP     +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

AT4G20380.2 LSD1 zinc finger family protein4.0e-2143.48Show/hide
Query:  LPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRRP
        +P PPPP     DMA ++CG CR +L Y +GA  V+CSCC T N V           + +V Q+ CG C   LMYPYGASSV+C+ C  VT + + N R 
Subjt:  LPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRRP

Query:  PWSVHQ--GQAAPPT
        P   ++  G A PP+
Subjt:  PWSVHQ--GQAAPPT

AT4G21610.1 lsd one like 23.4e-3655.56Show/hide
Query:  EIEKDEDDGPPPGWEPITPSLPL--------PPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASS
        E E++E++GPPPGWE      P+        P P  +   + AQMVCG+CRRLL YL+G+++V+CS C TVN VLEA++VGQV C +C +LLMYPYGA +
Subjt:  EIEKDEDDGPPPGWEPITPSLPL--------PPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVHQG
        VRCSSC SVT+I  +N+RPPWS  QG
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVHQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTCATGAAATCGAGAAAGACGAAGATGACGGCCCTCCTCCTGGATGGGAACCCATCACTCCCTCGCTGCCTCTACCACCGCCACCGCAACTTTCTTCAGCTGA
CATGGCACAAATGGTCTGTGGTACATGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCAATGCTCTTGCTGTTCAACAGTTAACTTTGTGTTAGAAGCTC
ACGAGGTTGGACAAGTTAAATGCGGTTCTTGTGCAGTGTTGCTTATGTACCCATATGGAGCATCATCAGTTAGGTGTTCCTCGTGTACCAGTGTGACAGAAATTGGGGTT
CATAATAGACGGCCACCGTGGTCTGTTCACCAGGGACAAGCAGCCCCTCCTACCAACTTTGTCCAATAG
mRNA sequenceShow/hide mRNA sequence
GGGGAGAATTTGAGAAATTAGGGAGCCAATGCGCGGGACGCCGTTGTCCATGAAAACAGCAACACGATCGATTCTTAAGACCACAAATCCAGAGAATGGATGTTCATGAA
ATCGAGAAAGACGAAGATGACGGCCCTCCTCCTGGATGGGAACCCATCACTCCCTCGCTGCCTCTACCACCGCCACCGCAACTTTCTTCAGCTGACATGGCACAAATGGT
CTGTGGTACATGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCAATGCTCTTGCTGTTCAACAGTTAACTTTGTGTTAGAAGCTCACGAGGTTGGACAAG
TTAAATGCGGTTCTTGTGCAGTGTTGCTTATGTACCCATATGGAGCATCATCAGTTAGGTGTTCCTCGTGTACCAGTGTGACAGAAATTGGGGTTCATAATAGACGGCCA
CCGTGGTCTGTTCACCAGGGACAAGCAGCCCCTCCTACCAACTTTGTCCAATAGAATTTGTTTTTCTGAGTTTCTTTTAGGAAAAGAGGTTTCATTTTCTGAGTTTTTCT
TTTCCGTTGCAGCCTTAATCAGCAGGCAGAGAGAAGGAAAAGAGAACACTATCAATCATTACTACCTCTTTTGTTTCTTTATTATTAGCTATTGAGTTTATGTAAAGAAA
CTTAGGAACTCACCTTCCCAACTTCTAACGTTTTTTTTCTTTTTATCTTAAGTTTTTTTGACTTGTGACTTGACTTCTTGCTTTATGTTCATTTTTTTTAATGCTGCTGA
TTGGAGCCTTATTAGTTGCTGCCAATCTCTGAGGTGTACTTAATTGTAATTTGTAAATGATGAATCTTTTTTGTTGTCAAATTGTTGAGGTGTAATTTATTGAGATGAAC
CGTCTATATTTTATTATCTATGATAGTTAAGTTTGATGATCCTTTAAGATATTAGGCGTATGTTTTTCTCATTAGCATTTTCACTTTTCGTTCCAATCTTAAATTTAAAT
GTTTAATAATTTAACTTTGGTAAACGAGGACTCTGCTTTCGAAAGAGGCAGTGAATGTTGGGTCCATAGTGTAGATATAAGGTCTAATAGCATATTGAATTTATATAAAG
AAACAAGATTGTCAAATATGCCTTGACAGGGACAATGCAATTGCCCTTCTAGCATCCATCCATATCTTACTGAAAAGTTGAAATTTCGGCCTCTCAAAACTAATATTGGA
ATAGAAATTGTTTAAAATTCGGATTTGAAATGGTGTGGGGTGATTTAGAATTAAAATTTTCTGCTCTGTTTCAAGTTCAAACTTTCGTTTTGGAGTTCTTAAAGATTTTT
CTCAAAGCAATCGTAACATTACAACTTGCAGAAGAAGGTAACTATTTTTTAAAGAGGCAGAGCGGCTACA
Protein sequenceShow/hide protein sequence
MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSSADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGV
HNRRPPWSVHQGQAAPPTNFVQ