; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy1G013660 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G013660
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionSister chromatid cohesion protein PDS5-like protein A
Genome locationGy14Chr1:9198673..9199829
RNA-Seq ExpressionCsGy1G013660
SyntenyCsGy1G013660
Gene Ontology termsGO:0007064 - mitotic sister chromatid cohesion (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039776 - Sister chromatid cohesion protein Pds5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652769.1 hypothetical protein Csa_022895 [Cucumis sativus]8.08e-7496.09Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKKLMLHLLVALRLTQLV
        MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKKLMLHLLVALRLTQLV
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKKLMLHLLVALRLTQLV

Query:  FQQRIVVYYLMMKLDIDSALTKSLAKPY
        FQQRIVVYYLMMKLDIDSALTK  A  +
Subjt:  FQQRIVVYYLMMKLDIDSALTKSLAKPY

XP_016903052.1 PREDICTED: LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A [Cucumis melo]1.39e-1987.5Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETN  TAYPEYILPYLVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY

XP_038893525.1 sister chromatid cohesion protein PDS5 homolog B isoform X1 [Benincasa hispida]7.48e-2087.5Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETNS TAYPEYI+PYLVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY

XP_038893526.1 sister chromatid cohesion protein PDS5 homolog B isoform X2 [Benincasa hispida]7.48e-2087.5Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETNS TAYPEYI+PYLVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY

XP_038893527.1 sister chromatid cohesion protein PDS5 homolog B isoform X3 [Benincasa hispida]7.48e-2087.5Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETNS TAYPEYI+PYLVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ4 Uncharacterized protein8.24e-65100Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKKLMLHLLVALRLTQLV
        MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKKLMLHLLVALRLTQLV
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKKLMLHLLVALRLTQLV

Query:  FQ
        FQ
Subjt:  FQ

A0A0A0LW18 Uncharacterized protein7.90e-1983.33Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETNS TAYPEYILPYLVHALAH+SCPDVDECKD++AYELVY +++
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY

A0A1S4E4A6 LOW QUALITY PROTEIN: sister chromatid cohesion protein PDS5 homolog A6.73e-2087.5Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETN  TAYPEYILPYLVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY

A0A5D3E6K9 Sister chromatid cohesion protein PDS5-like protein A6.74e-2087.5Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSETN  TAYPEYILPYLVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY

A0A6J1HQY6 sister chromatid cohesion protein PDS5 homolog A-like isoform X27.99e-1983.33Show/hide
Query:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY
        MQSE N  TAYPEYI+PYLVHALAHHSCPDVDECKDV+AYELVYR+++
Subjt:  MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIY

SwissProt top hitse value%identityAlignment
P22180 Plasma membrane ATPase 12.4e-0650.94Show/hide
Query:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK
        E  D    E V  +  P++  +ENLRC++EGLT+ AA+ERL IF  +KLEEKK
Subjt:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK

Q08435 Plasma membrane ATPase 11.4e-0652.83Show/hide
Query:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK
        E  D    E V  +  P++  +ENLRC+KEGLT+ AA+ERL IF  +KLEEKK
Subjt:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK

Q08436 Plasma membrane ATPase 31.1e-0652.83Show/hide
Query:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK
        E  D    E V  +  P++  +ENLRC+KEGLT+ AA+ERL IF  +KLEEKK
Subjt:  ECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK

Q9LV11 ATPase 11, plasma membrane-type6.4e-0748.21Show/hide
Query:  DVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK
        D +E  +    E V  +  P++  +E+LRCS+EGLT+EAA+ERL +F  +KLEEKK
Subjt:  DVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK

Q9SU58 ATPase 4, plasma membrane-type8.3e-0764.86Show/hide
Query:  PLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK
        P++  +ENLRCSKEGLT++AA+ERL +F  +KLEEKK
Subjt:  PLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK

Arabidopsis top hitse value%identityAlignment
AT3G47950.1 H(+)-ATPase 45.9e-0864.86Show/hide
Query:  PLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK
        P++  +ENLRCSKEGLT++AA+ERL +F  +KLEEKK
Subjt:  PLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK

AT5G47690.1 binding2.0e-1652.11Show/hide
Query:  QSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEER
        Q++ NS T YP +ILPYLVHALAHHSCPDV++CKDV+ YE++YR++Y +      L   ++G T +  +ER
Subjt:  QSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEER

AT5G47690.2 binding2.0e-1652.11Show/hide
Query:  QSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEER
        Q++ NS T YP +ILPYLVHALAHHSCPDV++CKDV+ YE++YR++Y +      L   ++G T +  +ER
Subjt:  QSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEER

AT5G47690.3 binding2.0e-1652.11Show/hide
Query:  QSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEER
        Q++ NS T YP +ILPYLVHALAHHSCPDV++CKDV+ YE++YR++Y +      L   ++G T +  +ER
Subjt:  QSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEER

AT5G62670.1 H(+)-ATPase 114.5e-0848.21Show/hide
Query:  DVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK
        D +E  +    E V  +  P++  +E+LRCS+EGLT+EAA+ERL +F  +KLEEKK
Subjt:  DVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATACTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGT
CCAGGCATATGAACTAGTATATAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTGAGGCTGCCGAGGAAAGGCTGA
AGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGCGATTAACTCAGTTAGTTTTTCAGCAAAGAATAGTGGTTTATTACTTG
ATGATGAAGTTGGATATTGATTCTGCCCTTACGAAGTCTCTCGCTAAACCTTATGATTTTGGAGGCTATTTTAATGAAGGGGGAAGTGAAGCTTTACTGCTTACAGTTTC
ATTGGCTGCACTATTATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGGAAACCAATTCAGCTACAGCTTATCCGGAATACATATTACCATACTTGGTTCATGCTCTTGCTCATCATTCATGTCCAGATGTTGATGAATGCAAGGATGT
CCAGGCATATGAACTAGTATATAGGAAAATATACCCATTAAAGAGGTTTTATGAAAATCTGAGATGTAGCAAAGAGGGTCTTACCAGTGAGGCTGCCGAGGAAAGGCTGA
AGATTTTTAGTGACGATAAGCTTGAGGAAAAGAAGTTAATGCTTCACTTACTAGTAGCATTGCGATTAACTCAGTTAGTTTTTCAGCAAAGAATAGTGGTTTATTACTTG
ATGATGAAGTTGGATATTGATTCTGCCCTTACGAAGTCTCTCGCTAAACCTTATGATTTTGGAGGCTATTTTAATGAAGGGGGAAGTGAAGCTTTACTGCTTACAGTTTC
ATTGGCTGCACTATTATGTTGA
Protein sequenceShow/hide protein sequence
MQSETNSATAYPEYILPYLVHALAHHSCPDVDECKDVQAYELVYRKIYPLKRFYENLRCSKEGLTSEAAEERLKIFSDDKLEEKKLMLHLLVALRLTQLVFQQRIVVYYL
MMKLDIDSALTKSLAKPYDFGGYFNEGGSEALLLTVSLAALLC