CuGenDBv2

Gene ID	CsGy1G013930
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Pheophorbide a oxygenase family protein with Rieske domain
Genome location	Gy14Chr1:9573343..9575879
RNA-Seq Expression	CsGy1G013930
Synteny	CsGy1G013930
Gene Ontology terms	GO:0005737 - cytoplasm (cellular component) GO:0010277 - chlorophyllide a oxygenase [overall] activity (molecular function) GO:0032441 - pheophorbide a oxygenase activity (molecular function)
InterPro domains	IPR013626 - Pheophorbide a oxygenase

Homology

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GenBank top hits

e value

%identity

Alignment

BAH84856.1 putative pheide a oxygenase, partial [Cucumis sativus]

1.14e-38

48.26

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFLY-------LAINGFAPSMC--QWVL--
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R++  F+        + I+   P +   +WV+  
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFLY-------LAINGFAPSMC--QWVL--

Query:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFI--DGSTE
                  +   ++ SARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E IF+  +GST+
Subjt:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFI--DGSTE

KAE8037559.1 hypothetical protein FH972_010140 [Carpinus fangiana]

1.23e-36

47.9

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ---------------EW----------RLTQSF-----LYLAINGFAPSMCQ-----WVLEKLV-
        PEFSSV I+ DLFYG DTL+ENVSDPSHID AHH+                W          R+T  F     + + I+G  P +       W+    V 
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ---------------EW----------RLTQSF-----LYLAINGFAPSMCQ-----WVLEKLV-

Query:  --------LLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKAN
                ++ SARNFFQ +MPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E IF+  + E ++
Subjt:  --------LLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKAN

KAG7019292.1 Pheophorbide a oxygenase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.44e-36

52.32

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-----EW----------RLTQSFLY-------LAINGFAPSMC--QWVL------------EKLV
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+      W          R++  F+        + I+   P +   +WV+            +   
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-----EW----------RLTQSFLY-------LAINGFAPSMC--QWVL------------EKLV

Query:  LLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFI
        ++ SARNFFQFSMPGPAWWQ+VPRWHEHWTSNKVYDGDMIVLQG  E IF+
Subjt:  LLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFI

KGN64853.1 hypothetical protein Csa_022799 [Cucumis sativus]

7.91e-123

100

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Query:  MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVY
        MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVY
Subjt:  MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVY

Query:  DGDMIVLQGSGEDIFIDGSTEKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF
        DGDMIVLQGSGEDIFIDGSTEKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF
Subjt:  DGDMIVLQGSGEDIFIDGSTEKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF

TQE11054.1 hypothetical protein C1H46_003314 [Malus baccata]

7.81e-37

46.29

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL----YL---AINGFAPSMC--QWVL--
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R+T  F+    YL    I+   P +   +WV+  
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL----YL---AINGFAPSMC--QWVL--

Query:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKANLN
                  +   ++ SARNFFQFSMPGPAWWQVVPRW EHWTSNKVYDGDMIVLQG  +        E  ++N
Subjt:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKANLN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LST3 PaO domain-containing protein

3.83e-123

100

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Query:  MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVY
        MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVY
Subjt:  MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVY

Query:  DGDMIVLQGSGEDIFIDGSTEKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF
        DGDMIVLQGSGEDIFIDGSTEKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF
Subjt:  DGDMIVLQGSGEDIFIDGSTEKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF

A0A540NJ48 PaO domain-containing protein

3.78e-37

46.29

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL----YL---AINGFAPSMC--QWVL--
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R+T  F+    YL    I+   P +   +WV+  
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL----YL---AINGFAPSMC--QWVL--

Query:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKANLN
                  +   ++ SARNFFQFSMPGPAWWQVVPRW EHWTSNKVYDGDMIVLQG  +        E  ++N
Subjt:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKANLN

A0A660KTH6 PaO domain-containing protein

5.96e-37

47.9

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ---------------EW----------RLTQSF-----LYLAINGFAPSMCQ-----WVLEKLV-
        PEFSSV I+ DLFYG DTL+ENVSDPSHID AHH+                W          R+T  F     + + I+G  P +       W+    V 
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ---------------EW----------RLTQSF-----LYLAINGFAPSMCQ-----WVLEKLV-

Query:  --------LLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKAN
                ++ SARNFFQ +MPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E IF+  + E ++
Subjt:  --------LLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKAN

C6L809 Putative pheide a oxygenase (Fragment)

5.50e-39

48.26

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFLY-------LAINGFAPSMC--QWVL--
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R++  F+        + I+   P +   +WV+  
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFLY-------LAINGFAPSMC--QWVL--

Query:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFI--DGSTE
                  +   ++ SARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E IF+  +GST+
Subjt:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFI--DGSTE

M5WRF3 Rieske domain-containing protein (Fragment)

5.81e-37

48.26

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL----YL---AINGFAPSMC--QWVL--
        PEFSSV I+ DLFYG DTLMENVSDPSHID AHH+                    W          R+T  F+    YL    I+   P +   +W++  
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL----YL---AINGFAPSMC--QWVL--

Query:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKA
                  +   ++ SARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQG  E +F+  S E++
Subjt:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKA

SwissProt top hits

e value

%identity

Alignment

Q0DV66 Pheophorbide a oxygenase, chloroplastic

3.1e-28

41.86

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------EWRLTQSFLYLAINGFAPSMC-------------------------QWVL--
        P FS+V I+ DL+YG DTLMENVSDPSHI+ AHH+             +   + ++ Y   N   P +                          +WV+  
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------EWRLTQSFLYLAINGFAPSMC-------------------------QWVL--

Query:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKA
                  +   ++ SARNFFQFSMPG AWWQ+VPRW+EHWTSN VYDGDMIVLQG  E IF+  S E +
Subjt:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTEKA

Q9FYC2 Pheophorbide a oxygenase, chloroplastic

5.6e-30

45.29

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-------YLAINGFAPSM--CQWVL--
        PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W          R+T  F+        + ++   P +   +WV+  
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-------YLAINGFAPSM--CQWVL--

Query:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTE
                  +   ++ SARNFFQFS+PGPAWWQVVPRW+EHWTSN VYDGDMIVLQG  E +F+  S E
Subjt:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain

4.0e-31

45.29

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Query:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-------YLAINGFAPSM--CQWVL--
        PEFS+V I+ DLFYG DTLMENVSDPSHID AHH+                    W          R+T  F+        + ++   P +   +WV+  
Subjt:  PEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQ-------------------EW----------RLTQSFL-------YLAINGFAPSM--CQWVL--

Query:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTE
                  +   ++ SARNFFQFS+PGPAWWQVVPRW+EHWTSN VYDGDMIVLQG  E +F+  S E
Subjt:  ----------EKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGSGEDIFIDGSTE

Sequences

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CDS sequence

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ATGCCTGAGTTCTCATCAGTTATGATTCGGTGGGATCTATTTTATGGTAATGATACACTAATGGAGAATGTATCAGATCCTTCCCACATAGATCTTGCTCATCACCAAGA
GTGGAGATTGACACAAAGCTTCCTTTACTTGGCGATAAATGGATTTGCTCCCTCAATGTGCCAATGGGTCCTGGAAAAACTCGTTCTATTGTATAGTGCTCGAAACTTCT
TCCAGTTTTCAATGCCCGGTCCTGCTTGGTGGCAAGTGGTTCCTCGATGGCACGAGCATTGGACATCGAATAAGGTATATGATGGAGACATGATTGTTCTTCAGGGGTCA
GGAGAAGATATTTTTATCGATGGAAGCACGGAAAAGGCCAACCTAAATGGTTTAGGGCTTGCAGCCAACAGCCTCTGCCATCAACAGTTCTATCCTACCATCGTCTGGAT
TGTTTCTATAAAACTAAATGCTAAAGGCACGAACACTTTATTTTGA

mRNA sequence

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Protein sequence

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MPEFSSVMIRWDLFYGNDTLMENVSDPSHIDLAHHQEWRLTQSFLYLAINGFAPSMCQWVLEKLVLLYSARNFFQFSMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGS
GEDIFIDGSTEKANLNGLGLAANSLCHQQFYPTIVWIVSIKLNAKGTNTLF

CsGy1G013930 (gene) of Cucumber (Gy14) v2.1 genome