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CsGy1G014370 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G014370
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRAB6-interacting golgin
Genome locationGy14Chr1:10137356..10139556
RNA-Seq ExpressionCsGy1G014370
SyntenyCsGy1G014370
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]2.18e-107100Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]2.74e-10398.29Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGI GSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]4.55e-9189.39Show/hide
Query:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDP
        MTTQKQSWEAQ    QMQRV+NSGMIS +VN   IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DP
Subjt:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDP

Query:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

XP_022970344.1 uncharacterized protein LOC111469338 [Cucurbita maxima]1.69e-8484.83Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEAQQ    QRVK +           IGSP +EDQEEE+SRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPM
Subjt:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        RKEVS IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKNKEKSQLV+KLMELVNESEKLRMKKLEELS NIDIL
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]8.92e-9693.85Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSG-MISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDP
        MTT KQSWEAQQ   MQRVKNSG MISSNVN   IGSP+KEDQEEEISRSALA+FRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDP
Subjt:  MTTQKQSWEAQQ---MQRVKNSG-MISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDP

Query:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin1.05e-107100Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR

A0A1S3CFV6 RAB6-interacting golgin1.33e-10398.29Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGI GSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

A0A5D3CH78 RAB6-interacting golgin1.33e-10398.29Show/hide
Query:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
        MTTQKQSWEAQQMQRVKNSGMISSNVNNGI GSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE
Subjt:  MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

A0A6J1CNF1 RAB6-interacting golgin2.21e-9189.39Show/hide
Query:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDP
        MTTQKQSWEAQ    QMQRV+NSGMIS +VN   IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DP
Subjt:  MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDP

Query:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

A0A6J1I589 RAB6-interacting golgin8.17e-8584.83Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
        MTTQKQSWEAQQ    QRVK +           IGSP +EDQEEE+SRSALALFRAKEEEIERKKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPM
Subjt:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL
        RKEVS IRKKIDLVNKELKPLG+TCQKKEREYKEVL+L NEKNKEKSQLV+KLMELVNESEKLRMKKLEELS NIDIL
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)2.5e-5062.71Show/hide
Query:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM
        M T +Q  E  Q   +QR+K+SG IS N      GSP+ +++EEE+S+SA ALF+AKE+EIER+KME++++V+ +LG AEEAT+RLAEIREELE +TDPM
Subjt:  MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDI
        RKE+S IRK++D +N+ELKPLG +CQ+KERE+KE L+ +NEKNKEK+  VSKL+ELV ESEKLRM KLEELSK+I+I
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDI

AT2G36410.2 Family of unknown function (DUF662)4.1e-4561.76Show/hide
Query:  QKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSF
        Q QS    Q Q+  N  ++ +     +  S     ++EE++RSAL+ FRAKE+EIE+++ME+RE+++A+LGR E+ TKRL+ IREELE M DPMRKEVS 
Subjt:  QKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSF

Query:  IRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID
        +RKKID VNKELKPLG T QKKEREYKE LD FNEKN+EK QL++KLMELV ESEKLRM KLEELSK+I+
Subjt:  IRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID

AT3G09980.1 Family of unknown function (DUF662)2.3e-4867.31Show/hide
Query:  NSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP
        +S  + + ++  +  S     ++EE+SR+AL+ FRAKEEEIE+KKME+RE+V+A+LGR EE TKRLA IREELEG+ DPMRKEV+ +RKKID VNKELKP
Subjt:  NSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP

Query:  LGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID
        LG T QKKEREYKE L+ FNEKN+EK QL+++LMELV ESEK+RMKKLEELSKNID
Subjt:  LGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID

AT3G52920.1 Family of unknown function (DUF662)5.3e-4571.74Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE++RSAL+ FRAKE+EIE++KME+RE+V+A+LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPLG T QKKEREYKE LD FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNKEKSQLVSKLME---LVNESEKLRMKKLEELSKNID
        KN+EK QL++KLME   LV ESEKLR+KKL+ELS++ID
Subjt:  KNKEKSQLVSKLME---LVNESEKLRMKKLEELSKNID

AT3G52920.2 Family of unknown function (DUF662)1.3e-4673.33Show/hide
Query:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE
        ++EE++RSAL+ FRAKE+EIE++KME+RE+V+A+LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPLG T QKKEREYKE LD FNE
Subjt:  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNE

Query:  KNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID
        KN+EK QL++KLMELV ESEKLR+KKL+ELS++ID
Subjt:  KNKEKSQLVSKLMELVNESEKLRMKKLEELSKNID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATAATTGGGAGTCCGTTG
AAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTGGAA
GCTCGCCTTGGACGAGCTGAAGAAGCAACGAAGCGATTGGCGGAGATTCGGGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGG
AAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTGGATTTATTTAACGAGAAGAAC
AAAGAGAAATCTCAATTGGTATCCAAACTCATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTT
CGTTAA
mRNA sequenceShow/hide mRNA sequence
TAAGTGAATTTTGGTTCCAAAATTTCAGAGCAAAAGGCAGAGCAGAGTACAGAGGGGAAATCAAGGACAACGATGTGTGTCTGTTGAGAAGTAATAGAGAAAAAA
AAAAGTAAAGAAAGGGAGGGAGTTGGGTAGGGTTACATACATAGATACCTTTAAAGCCATTGCGGCGGGTTAAGGTTTGGCCACCTAACAGAGAAAGAAAATCAT
CATCATCATTTGCGAGAGAGAGATTGAGGATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATG
TGAATAATGGGATAATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGA
AGAAGATGGAGATGAGGGAGAAGGTGGAAGCTCGCCTTGGACGAGCTGAAGAAGCAACGAAGCGATTGGCGGAGATTCGGGAAGAACTTGAAGGAATGACGGATC
CGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAG
AAGTGTTGGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATTGGTATCCAAACTCATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGG
AAGAGCTGAGCAAGAACATTGACATCCTTCGTTAAGAAAAAGTGTTCTTCTAAGTTCTAACCCAAATTAATCACCAACAACCACTTT
Protein sequenceShow/hide protein sequence
MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIR
KKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDILR