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CsGy1G014695 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G014695
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationGy14Chr1:10609142..10610209
RNA-Seq ExpressionCsGy1G014695
SyntenyCsGy1G014695
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009610 - response to symbiotic fungus (biological process)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036711.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]4.98e-4243.78Show/hide
Query:  PINDPNLSQPNPEDLVQASKPNVKSSKGLPVVTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA-----
        P + PN+  P  E  ++ SK   K+S    V+TTKT R+K+PLNI SV +DGISFH E++ QRWKYVVQ+RI  E NVSDKH SC+S+M+ + +      
Subjt:  PINDPNLSQPNPEDLVQASKPNVKSSKGLPVVTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA-----

Query:  -------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPSLLR--------------HI--------------------GTFGVKNPLALPRFF
                     EFIVNLP  F+DPSS +YQTIH++G+ F ISP+++               HI                    GTFGVK P+ LP FF
Subjt:  -------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPSLLR--------------HI--------------------GTFGVKNPLALPRFF

Query:  SSFLLHLQPNILTNLDA
        SS L+HL  +ILT  DA
Subjt:  SSFLLHLQPNILTNLDA

KAA0036856.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.18e-4539.49Show/hide
Query:  SDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV-VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQ
        S+    +++D  E VA GD+N  +   P +   DP   Q  P  +    KP  K  + +   +TTK GR+K+PLNIPSVPIDGISFH E+N  RWK+VVQ
Subjt:  SDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV-VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQ

Query:  QRIAYEGNVSDKHQSCVSVMDHISQA------------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPS-----------------------
        +RIA E N+SDKH SCVS+M+ I +A                  EFIVNLP+N +DPSS +Y T+H+RG +F ISP+                       
Subjt:  QRIAYEGNVSDKHQSCVSVMDHISQA------------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPS-----------------------

Query:  ------------------------------------LLRHIGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP
                                            LLRH+G+FGVK P+ALPRFFS  LLHL   +LT LDA  P
Subjt:  ------------------------------------LLRHIGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP

KAE8652851.1 hypothetical protein Csa_022694 [Cucumis sativus]5.85e-8194.24Show/hide
Query:  SLPHHNSDDFVFNPSDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPVVTTKTGRQKLPLNIPSVPIDGISFH
        SLPHHNSDD VFNPSDHLL ESEDIPETVASGDHNVSIRAP SSPINDPNLSQPNPEDLVQASK NVKSSKGLPVVTTKTG QKLPLNIPSVPIDGISFH
Subjt:  SLPHHNSDDFVFNPSDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPVVTTKTGRQKLPLNIPSVPIDGISFH

Query:  HEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA
        HEKN QRWKYVVQQRIAYEGNVS+K+QSCVSVMDHISQA
Subjt:  HEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA

KGN64982.2 hypothetical protein Csa_022750 [Cucumis sativus]6.33e-16095.02Show/hide
Query:  MSKEKGHAPMNTRSSSFESSSIGSLPHHNSDDFVFNPSDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPVVT
        MSKEKGHAPMNTRSSSFESSSIGSLPHHNSDD VFNPSDHLL ESEDIPETVASGDHNVSIRAP SSPINDPNLSQPNPEDLVQASK NVKSSKGLPVVT
Subjt:  MSKEKGHAPMNTRSSSFESSSIGSLPHHNSDDFVFNPSDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPVVT

Query:  TKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQAEFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPSLLRHI
        TKTG QKLPLNIPSVPIDGISFHHEKN QRWKYVVQQRIAYEGNVS+K+QSCVSVMDHISQAEFI NLPSNFDDPSSSNYQTIHVRGTQFNISPSLLRHI
Subjt:  TKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQAEFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPSLLRHI

Query:  GTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSPIHAPYY
        GTFGVK PLALPRFFSSFLLHLQP+ILTNLDA SPIHAPYY
Subjt:  GTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSPIHAPYY

TYK05279.1 uncharacterized protein E5676_scaffold108G00960 [Cucumis melo var. makuwa]9.11e-4237.98Show/hide
Query:  SSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV-VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA--
        S  +N+  L+Q     +    KP+ K  + L   +TTK GR+K+PLNIPSVPIDGISFH E+N QRWK+V+Q+RIA E N+SDKH SCVS+M  I +   
Subjt:  SSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV-VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA--

Query:  ----------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPS---------------------------------------------------
                        EF+VNLP++F+DP+S NYQT+H+RG +F+I+P+                                                   
Subjt:  ----------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPS---------------------------------------------------

Query:  ------------------LLRHIGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP
                          LLRH+G+F VK P+ALPRFFS  LLHL   ILT  DA  P
Subjt:  ------------------LLRHIGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP

TrEMBL top hitse value%identityAlignment
A0A1S3AV82 uncharacterized protein LOC1034830261.04e-4036.96Show/hide
Query:  SDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV---VTTKTGRQKLPLNIPSVPI-DGISFHHEKNAQRWKY
        S+   L++ D  E VA GDHN  +   P +   DP+  Q   E L   ++P     KG  +   +TTK GR+K+PLNIPSVPI DGISFH E+N QRWK+
Subjt:  SDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV---VTTKTGRQKLPLNIPSVPI-DGISFHHEKNAQRWKY

Query:  VVQQRIAYEGNVSDKHQSCVSVMDHISQA------------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPSLLRH----------------
        +VQ+RIA + N+SDK+ SCVS+M+ I +                   EFIVNLP++F+DPSS +YQ +H++G +F IS +++                  
Subjt:  VVQQRIAYEGNVSDKHQSCVSVMDHISQA------------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPSLLRH----------------

Query:  ----------------------------------------IGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP
                                                +G+FGVK P+ALPRFFS  LLHL   +LT  DA  P
Subjt:  ----------------------------------------IGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP

A0A5A7TLL0 Uncharacterized protein4.31e-4140.18Show/hide
Query:  VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA------------------EFIVNLPSNFDDPSSSNY
        +TTK GR+K+PLNIPSVPIDGISFH E+N QRWK+V+Q+RIA E N+SDKH SCVS+M  I +                   EF+VNLP++F+DP+S NY
Subjt:  VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA------------------EFIVNLPSNFDDPSSSNY

Query:  QTIHVRGTQFNISPS---------------------------------------------------------------------LLRHIGTFGVKNPLAL
        QT+H+RG +F+I+P+                                                                     LLRH+G+F VK P+AL
Subjt:  QTIHVRGTQFNISPS---------------------------------------------------------------------LLRHIGTFGVKNPLAL

Query:  PRFFSSFLLHLQPNILTNLDASSP
        PRFFS  LLHL   ILT  DA  P
Subjt:  PRFFSSFLLHLQPNILTNLDASSP

A0A5D3B7L1 Gag-pol polyprotein3.96e-4539.49Show/hide
Query:  SDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV-VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQ
        S+    +++D  E VA GD+N  +   P +   DP   Q  P  +    KP  K  + +   +TTK GR+K+PLNIPSVPIDGISFH E+N  RWK+VVQ
Subjt:  SDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV-VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQ

Query:  QRIAYEGNVSDKHQSCVSVMDHISQA------------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPS-----------------------
        +RIA E N+SDKH SCVS+M+ I +A                  EFIVNLP+N +DPSS +Y T+H+RG +F ISP+                       
Subjt:  QRIAYEGNVSDKHQSCVSVMDHISQA------------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPS-----------------------

Query:  ------------------------------------LLRHIGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP
                                            LLRH+G+FGVK P+ALPRFFS  LLHL   +LT LDA  P
Subjt:  ------------------------------------LLRHIGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP

A0A5D3BZR7 Cell wall protein RBR3-like2.41e-4243.78Show/hide
Query:  PINDPNLSQPNPEDLVQASKPNVKSSKGLPVVTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA-----
        P + PN+  P  E  ++ SK   K+S    V+TTKT R+K+PLNI SV +DGISFH E++ QRWKYVVQ+RI  E NVSDKH SC+S+M+ + +      
Subjt:  PINDPNLSQPNPEDLVQASKPNVKSSKGLPVVTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA-----

Query:  -------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPSLLR--------------HI--------------------GTFGVKNPLALPRFF
                     EFIVNLP  F+DPSS +YQTIH++G+ F ISP+++               HI                    GTFGVK P+ LP FF
Subjt:  -------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPSLLR--------------HI--------------------GTFGVKNPLALPRFF

Query:  SSFLLHLQPNILTNLDA
        SS L+HL  +ILT  DA
Subjt:  SSFLLHLQPNILTNLDA

A0A5D3C4H7 Uncharacterized protein4.41e-4237.98Show/hide
Query:  SSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV-VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA--
        S  +N+  L+Q     +    KP+ K  + L   +TTK GR+K+PLNIPSVPIDGISFH E+N QRWK+V+Q+RIA E N+SDKH SCVS+M  I +   
Subjt:  SSPINDPNLSQPNPEDLVQASKPNVKSSKGLPV-VTTKTGRQKLPLNIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQA--

Query:  ----------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPS---------------------------------------------------
                        EF+VNLP++F+DP+S NYQT+H+RG +F+I+P+                                                   
Subjt:  ----------------EFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPS---------------------------------------------------

Query:  ------------------LLRHIGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP
                          LLRH+G+F VK P+ALPRFFS  LLHL   ILT  DA  P
Subjt:  ------------------LLRHIGTFGVKNPLALPRFFSSFLLHLQPNILTNLDASSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACCACATCACAATTCTGATGACTTTGTATTTAATCC
ATCTGACCATTTGCTCCTTGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTCCTATAAATGACCCAAACC
TATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACCTAATGTCAAGTCTTCCAAGGGCCTTCCTGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCCCCTC
AACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGA
CAAACATCAATCATGTGTTAGTGTTATGGATCATATCAGCCAAGCTGAGTTTATTGTCAATCTTCCATCTAACTTTGATGACCCTAGCAGCTCAAATTATCAAACCATTC
ATGTTCGAGGGACTCAGTTCAACATTTCTCCTTCGTTGTTAAGGCATATTGGTACGTTTGGGGTAAAAAATCCACTCGCTCTTCCTCGGTTCTTCTCCAGTTTCTTGCTT
CACTTACAACCTAATATTTTAACTAATCTTGATGCTTCGAGCCCAATCCATGCACCTTATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAAGAAAAAGGTCATGCTCCTATGAATACACGATCATCTAGTTTTGAAAGTAGCTCTATTGGGTCCCTACCACATCACAATTCTGATGACTTTGTATTTAATCC
ATCTGACCATTTGCTCCTTGAATCTGAGGACATTCCTGAGACTGTTGCTTCTGGTGATCATAATGTGTCTATTCGGGCTCCTCCCTCATCTCCTATAAATGACCCAAACC
TATCTCAACCTAACCCTGAAGATCTCGTCCAAGCATCAAAACCTAATGTCAAGTCTTCCAAGGGCCTTCCTGTTGTTACCACTAAGACAGGACGCCAAAAGCTTCCCCTC
AACATTCCCTCAGTACCTATTGATGGGATTTCTTTCCATCATGAAAAAAATGCTCAAAGGTGGAAGTATGTTGTGCAGCAAAGGATAGCATATGAGGGAAATGTTTCTGA
CAAACATCAATCATGTGTTAGTGTTATGGATCATATCAGCCAAGCTGAGTTTATTGTCAATCTTCCATCTAACTTTGATGACCCTAGCAGCTCAAATTATCAAACCATTC
ATGTTCGAGGGACTCAGTTCAACATTTCTCCTTCGTTGTTAAGGCATATTGGTACGTTTGGGGTAAAAAATCCACTCGCTCTTCCTCGGTTCTTCTCCAGTTTCTTGCTT
CACTTACAACCTAATATTTTAACTAATCTTGATGCTTCGAGCCCAATCCATGCACCTTATTATTGA
Protein sequenceShow/hide protein sequence
MSKEKGHAPMNTRSSSFESSSIGSLPHHNSDDFVFNPSDHLLLESEDIPETVASGDHNVSIRAPPSSPINDPNLSQPNPEDLVQASKPNVKSSKGLPVVTTKTGRQKLPL
NIPSVPIDGISFHHEKNAQRWKYVVQQRIAYEGNVSDKHQSCVSVMDHISQAEFIVNLPSNFDDPSSSNYQTIHVRGTQFNISPSLLRHIGTFGVKNPLALPRFFSSFLL
HLQPNILTNLDASSPIHAPYY