; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy1G014850 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G014850
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPoly(A)-specific ribonuclease
Genome locationGy14Chr1:10758738..10759571
RNA-Seq ExpressionCsGy1G014850
SyntenyCsGy1G014850
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139505.1 LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus]1.15e-20297.83Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGN
        MLIHDLN NHKSIQIREVWASNL+SEFRLIRDLIDQFPCVSMDTEFPGVIFPQQ  PKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG+
Subjt:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGN

Query:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFF
        TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLP DLEQFLGVVRLFF
Subjt:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFF

Query:  GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
Subjt:  GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

XP_008463638.1 PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis melo]5.14e-19191.46Show/hide
Query:  MLIHDLNINHKSI----QIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL
        MLIHDLNINH+SI    QIREVWASNLDSEFRLI DLID+FPCVSMDTEFPGVIFPQQ KPK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHKSI----QIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL

Query:  GTGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV
        GTG+TRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLP  LE+FLGVV
Subjt:  GTGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV

Query:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        R+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Subjt:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]6.43e-16681.59Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG
        M++ DL  N K IQIREVWASNL+SEF LIRDLIDQFPCVSMDTEFPGV+F   AKP    N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGTG
Subjt:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG

Query:  NTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF
         +RFIWEFNF DFDVARD+HAP+SIELLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT + LP+ LE+FLGV+R+F
Subjt:  NTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF

Query:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDRIAK +NV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  + KHAGVLYGLEV
Subjt:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]1.81e-16178.93Show/hide
Query:  MLIHDLNINH-KSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSP--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLG
        M+ HDLN NH KSI+IREVWASNL+SEF+LIRDLID FPCVSMDTEFPG++F     P +      S HY+ LKSNVD L+LIQIGITLSDSDGNLPDLG
Subjt:  MLIHDLNINH-KSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSP--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLG

Query:  TGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVR
        T ++RFIWEFNF DFD+ARD++AP+SI+LLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILT + LPN L++FLGV+R
Subjt:  TGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVR

Query:  LFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        + FGDNVYD+KY+MRFC+SLYGGLDRIAK++NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLE F
Subjt:  LFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]1.55e-17384.17Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKS-PNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG
        M+IHDLNIN+KSI+IREVWASNL+SEF+LIRDLIDQFPCVSMDTEFPG++F   A+P +  + PS HY+ LKSNVD LHLIQIGITLSDSDGNLPDLGT 
Subjt:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKS-PNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG

Query:  NTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF
        +TRFIWEFNF DFDVARDLHAP+SIELLRRQGIDF+RNR EGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT ++LP+ +++FLGV+R+F
Subjt:  NTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF

Query:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        FGDNVYDMKYLMRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ EM KHAGVLYGLEVF
Subjt:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease5.56e-20397.83Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGN
        MLIHDLN NHKSIQIREVWASNL+SEFRLIRDLIDQFPCVSMDTEFPGVIFPQQ  PKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG+
Subjt:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGN

Query:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFF
        TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLP DLEQFLGVVRLFF
Subjt:  TRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFF

Query:  GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
Subjt:  GDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

A0A1S3CJQ2 Poly(A)-specific ribonuclease2.49e-19191.46Show/hide
Query:  MLIHDLNINHKSI----QIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL
        MLIHDLNINH+SI    QIREVWASNLDSEFRLI DLID+FPCVSMDTEFPGVIFPQQ KPK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHKSI----QIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL

Query:  GTGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV
        GTG+TRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLP  LE+FLGVV
Subjt:  GTGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV

Query:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        R+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Subjt:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

A0A5A7T1W0 Poly(A)-specific ribonuclease2.49e-19191.46Show/hide
Query:  MLIHDLNINHKSI----QIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL
        MLIHDLNINH+SI    QIREVWASNLDSEFRLI DLID+FPCVSMDTEFPGVIFPQQ KPK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDL
Subjt:  MLIHDLNINHKSI----QIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL

Query:  GTGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV
        GTG+TRFIWEFNFKDFDVARD HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILT QKLP  LE+FLGVV
Subjt:  GTGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVV

Query:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        R+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Subjt:  RLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

A0A6J1CN71 Poly(A)-specific ribonuclease3.11e-16681.59Show/hide
Query:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG
        M++ DL  N K IQIREVWASNL+SEF LIRDLIDQFPCVSMDTEFPGV+F   AKP    N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGTG
Subjt:  MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKP-KSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTG

Query:  NTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF
         +RFIWEFNF DFDVARD+HAP+SIELLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT + LP+ LE+FLGV+R+F
Subjt:  NTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLF

Query:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        FGD VYD+KY+MRFC+SLYGGLDRIAK +NV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  + KHAGVLYGLEV
Subjt:  FGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

A0A6J1G223 Poly(A)-specific ribonuclease8.75e-16278.93Show/hide
Query:  MLIHDLNINH-KSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSP--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLG
        M+ HDLN NH KSI+IREVWASNL+SEF+LIRDLID FPCVSMDTEFPG++F     P +      S HY+ LKSNVD L+LIQIGITLSDSDGNLPDLG
Subjt:  MLIHDLNINH-KSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSP--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLG

Query:  TGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVR
        T ++RFIWEFNF DFD+ARD++AP+SI+LLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILT + LPN L++FLGV+R
Subjt:  TGNTRFIWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVR

Query:  LFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        + FGDNVYD+KY+MRFC+SLYGGLDRIAK++NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLE F
Subjt:  LFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 118.8e-10869.29Show/hide
Query:  IQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL-GTGNTRFIWEFNFKD
        I IR+VWA NL+SEF LIR +++ +P +SMDTEFPGVI+          +P++ Y  LKSNVD L LIQ+G+TLSD+DGNLPDL G  N R+IWEFNF+D
Subjt:  IQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL-GTGNTRFIWEFNFKD

Query:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLM
        FDV RD HAP+SIELLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT ++LP  L +FLG++R FFGD VYD+K++M
Subjt:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLM

Query:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        RFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV+    KHAGVLYGLEVF
Subjt:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

Q9LEU4 Probable CCR4-associated factor 1 homolog 101.3e-7453.53Show/hide
Query:  INHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIWEF
        +   SI IREVW  NL  EF LIR+++D+F  ++MDTEFPGV+    A  K  N    +Y+ LK NVDLL LIQ+G+T SD +GNLP  GT +   IW+F
Subjt:  INHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIWEF

Query:  NFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDM
        NF++F++  D++A  SIELLR+ GIDF +N E+GID  RF ELMMSSG+V ND++SWVTFH  YDFGYLVK+LT ++LP     F  ++ ++F   VYD+
Subjt:  NFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDM

Query:  KYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        K+LM FC  L+GGL+R+A+ M V R VG CHQAGSDSLLT  +F+K+++ +F      K+ GVLYGL V
Subjt:  KYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.7e-10366.18Show/hide
Query:  DLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTR-F
        DL  +  ++  REVWA NL+SEF LI ++ID +P +SMDTEFPGVIF    +     +P   Y  LK+NVD L LIQ+G+TLSD +GNLPDLG    R F
Subjt:  DLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTR-F

Query:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDN
        IWEFNF+DFDVARD HAP+SIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT ++LP  L +F  V+R+ FG+ 
Subjt:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDN

Query:  VYDMKYLMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        VYD+K++M+FC+  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ    KHAGVLYGLEVF
Subjt:  VYDMKYLMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

Q9SAI2 Probable CCR4-associated factor 1 homolog 63.6e-7753.14Show/hide
Query:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW
        L +   SIQIREVW  NL  E  LIRD++D FP V+MDTEFPG++       KS  +  +HY+ LK+NV++L +IQ+G+T S+  GNLP  GT +   IW
Subjt:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D+ A +SIELL++ GID  +N  +GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+    F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.0e-8054.24Show/hide
Query:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW
        L +   SIQIREVW  NL+SE  LIR+++D FP V+MDTEFPG++       K+  +  +HY+ LK+NV++L +IQ+G+T SD  GNLP  GT N   IW
Subjt:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D++A +SIELLR+ GIDF +N E GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ ++V R VG CHQAGSDSLLT   F+K+++ FF+ + M K++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-7853.14Show/hide
Query:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW
        L +   SIQIREVW  NL  E  LIRD++D FP V+MDTEFPG++       KS  +  +HY+ LK+NV++L +IQ+G+T S+  GNLP  GT +   IW
Subjt:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D+ A +SIELL++ GID  +N  +GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+    F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-7853.14Show/hide
Query:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW
        L +   SIQIREVW  NL  E  LIRD++D FP V+MDTEFPG++       KS  +  +HY+ LK+NV++L +IQ+G+T S+  GNLP  GT +   IW
Subjt:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D+ A +SIELL++ GID  +N  +GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP+    F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F+K+++ FFV   +HK++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-8154.24Show/hide
Query:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW
        L +   SIQIREVW  NL+SE  LIR+++D FP V+MDTEFPG++       K+  +  +HY+ LK+NV++L +IQ+G+T SD  GNLP  GT N   IW
Subjt:  LNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIW

Query:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY
        +FNF++FD+  D++A +SIELLR+ GIDF +N E GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q LP     F  ++ ++F   VY
Subjt:  EFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVY

Query:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV
        D+K+LM+FC SL+GGL+++A+ ++V R VG CHQAGSDSLLT   F+K+++ FF+ + M K++GVLYGL V
Subjt:  DMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-10466.18Show/hide
Query:  DLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTR-F
        DL  +  ++  REVWA NL+SEF LI ++ID +P +SMDTEFPGVIF    +     +P   Y  LK+NVD L LIQ+G+TLSD +GNLPDLG    R F
Subjt:  DLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTR-F

Query:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDN
        IWEFNF+DFDVARD HAP+SIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT ++LP  L +F  V+R+ FG+ 
Subjt:  IWEFNFKDFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDN

Query:  VYDMKYLMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        VYD+K++M+FC+  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ    KHAGVLYGLEVF
Subjt:  VYDMKYLMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.3e-10969.29Show/hide
Query:  IQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL-GTGNTRFIWEFNFKD
        I IR+VWA NL+SEF LIR +++ +P +SMDTEFPGVI+          +P++ Y  LKSNVD L LIQ+G+TLSD+DGNLPDL G  N R+IWEFNF+D
Subjt:  IQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDL-GTGNTRFIWEFNFKD

Query:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLM
        FDV RD HAP+SIELLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT ++LP  L +FLG++R FFGD VYD+K++M
Subjt:  FDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLM

Query:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF
        RFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV+    KHAGVLYGLEVF
Subjt:  RFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTATCCACGATCTCAACATCAACCACAAATCCATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGATTCCGAATTTCGTTTGATCCGCGATCTCATCGACCAATT
CCCTTGCGTTTCAATGGACACGGAGTTCCCCGGAGTCATTTTCCCCCAACAAGCCAAACCCAAATCTCCAAATCACCCCTCCCATCACTACCAATTCCTCAAATCCAACG
TCGACCTCCTCCATCTCATCCAGATCGGAATCACTCTCTCCGATTCTGACGGAAACTTGCCAGATCTCGGCACCGGCAACACCCGATTTATCTGGGAGTTCAACTTTAAG
GACTTTGACGTGGCGCGTGACCTCCACGCTCCGAACTCCATCGAGCTTCTACGCCGTCAGGGCATCGACTTCGACCGGAATCGAGAAGAAGGGATCGATTCCTCCCGCTT
CGCCGAGTTGATGATGTCATCGGGACTCGTCTGTAACGACTCGGTCAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCACCAAA
AACTTCCAAATGATTTAGAACAGTTCCTCGGCGTTGTTAGGCTCTTCTTCGGCGATAACGTGTACGACATGAAGTACTTGATGCGCTTCTGCCAGAGTCTATACGGCGGT
TTGGACCGGATTGCGAAAACTATGAATGTGAACCGGGCGGTTGGAAAGTGCCATCAAGCCGGCTCAGATAGCTTGCTAACGTGGCATGCCTTTCAAAAGATGAGAGATAC
CTTTTTTGTACAGACTGAAATGCACAAACATGCTGGGGTTTTGTACGGATTAGAGGTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTATCCACGATCTCAACATCAACCACAAATCCATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGATTCCGAATTTCGTTTGATCCGCGATCTCATCGACCAATT
CCCTTGCGTTTCAATGGACACGGAGTTCCCCGGAGTCATTTTCCCCCAACAAGCCAAACCCAAATCTCCAAATCACCCCTCCCATCACTACCAATTCCTCAAATCCAACG
TCGACCTCCTCCATCTCATCCAGATCGGAATCACTCTCTCCGATTCTGACGGAAACTTGCCAGATCTCGGCACCGGCAACACCCGATTTATCTGGGAGTTCAACTTTAAG
GACTTTGACGTGGCGCGTGACCTCCACGCTCCGAACTCCATCGAGCTTCTACGCCGTCAGGGCATCGACTTCGACCGGAATCGAGAAGAAGGGATCGATTCCTCCCGCTT
CGCCGAGTTGATGATGTCATCGGGACTCGTCTGTAACGACTCGGTCAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCACCAAA
AACTTCCAAATGATTTAGAACAGTTCCTCGGCGTTGTTAGGCTCTTCTTCGGCGATAACGTGTACGACATGAAGTACTTGATGCGCTTCTGCCAGAGTCTATACGGCGGT
TTGGACCGGATTGCGAAAACTATGAATGTGAACCGGGCGGTTGGAAAGTGCCATCAAGCCGGCTCAGATAGCTTGCTAACGTGGCATGCCTTTCAAAAGATGAGAGATAC
CTTTTTTGTACAGACTGAAATGCACAAACATGCTGGGGTTTTGTACGGATTAGAGGTCTTCTAA
Protein sequenceShow/hide protein sequence
MLIHDLNINHKSIQIREVWASNLDSEFRLIRDLIDQFPCVSMDTEFPGVIFPQQAKPKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGNTRFIWEFNFK
DFDVARDLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTHQKLPNDLEQFLGVVRLFFGDNVYDMKYLMRFCQSLYGG
LDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF