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CsGy1G015260 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G015260
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
Genome locationGy14Chr1:11218960..11219352
RNA-Seq ExpressionCsGy1G015260
SyntenyCsGy1G015260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022386.1 putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.94e-0945.16Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL
        +SSVLKACKG+KALS G LAHSLATKH                 TC                    +W TL      RGDGY+GLQ FRQMLL
Subjt:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL

KGN65014.1 hypothetical protein Csa_022723 [Cucumis sativus]8.72e-33100Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATKHTCTWLTLRGDGYNGLQAFRQMLLALYGEL
        MSSVLKACKGIKALSYGILAHSLATKHTCTWLTLRGDGYNGLQAFRQMLLALYGEL
Subjt:  MSSVLKACKGIKALSYGILAHSLATKHTCTWLTLRGDGYNGLQAFRQMLLALYGEL

XP_022931578.1 putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita moschata]8.94e-0945.16Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL
        +SSVLKACKG+KALS G LAHSLATKH                 TC                    +W TL      RGDGY+GLQ FRQMLL
Subjt:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL

XP_022989366.1 putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita maxima]8.94e-0945.16Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL
        +SSVLKACKG+KALS G LAHSLATKH                 TC                    +W TL      RGDGY+GLQ FRQMLL
Subjt:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL

XP_023520790.1 putative pentatricopeptide repeat-containing protein At1g56570 [Cucurbita pepo subsp. pepo]8.94e-0945.16Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL
        +SSVLKACKG+KALS G LAHSLATKH                 TC                    +W TL      RGDGY+GLQ FRQMLL
Subjt:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL

TrEMBL top hitse value%identityAlignment
A0A0A0LVR2 Uncharacterized protein4.22e-33100Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATKHTCTWLTLRGDGYNGLQAFRQMLLALYGEL
        MSSVLKACKGIKALSYGILAHSLATKHTCTWLTLRGDGYNGLQAFRQMLLALYGEL
Subjt:  MSSVLKACKGIKALSYGILAHSLATKHTCTWLTLRGDGYNGLQAFRQMLLALYGEL

A0A0A0LW37 Uncharacterized protein1.11e-0844.33Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATKH------------------TC-------------------TWLTL------RGDGYNGLQAFRQMLLALYG
        MSSVLKACKG+KALS G LAHSLATKH                  +C                   +W TL      RGDGY+GL AFRQMLL   G
Subjt:  MSSVLKACKGIKALSYGILAHSLATKH------------------TC-------------------TWLTL------RGDGYNGLQAFRQMLLALYG

A0A1S3BQ30 putative pentatricopeptide repeat-containing protein At1g565708.85e-0742.27Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATK------------------HTC-------------------TWLTL------RGDGYNGLQAFRQMLLALYG
        MSSVLKACKG+KALS G LAHSLATK                   +C                   +W TL      RGDGY+GL AFR+MLL   G
Subjt:  MSSVLKACKGIKALSYGILAHSLATK------------------HTC-------------------TWLTL------RGDGYNGLQAFRQMLLALYG

A0A6J1EZ33 putative pentatricopeptide repeat-containing protein At1g565704.33e-0945.16Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL
        +SSVLKACKG+KALS G LAHSLATKH                 TC                    +W TL      RGDGY+GLQ FRQMLL
Subjt:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL

A0A6J1JJV4 putative pentatricopeptide repeat-containing protein At1g565704.33e-0945.16Show/hide
Query:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL
        +SSVLKACKG+KALS G LAHSLATKH                 TC                    +W TL      RGDGY+GLQ FRQMLL
Subjt:  MSSVLKACKGIKALSYGILAHSLATKH-----------------TC--------------------TWLTL------RGDGYNGLQAFRQMLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGTGTTCTCAAGGCTTGCAAAGGCATCAAGGCTCTTTCTTATGGGATTTTGGCTCATAGTTTGGCCACAAAGCACACGTGCACATGGTTGACTCTCAGAGGTGA
TGGTTACAACGGGCTTCAAGCTTTCAGGCAAATGTTACTGGCCTTGTATGGGGAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAGTGTTCTCAAGGCTTGCAAAGGCATCAAGGCTCTTTCTTATGGGATTTTGGCTCATAGTTTGGCCACAAAGCACACGTGCACATGGTTGACTCTCAGAGGTGA
TGGTTACAACGGGCTTCAAGCTTTCAGGCAAATGTTACTGGCCTTGTATGGGGAGCTTTGA
Protein sequenceShow/hide protein sequence
MSSVLKACKGIKALSYGILAHSLATKHTCTWLTLRGDGYNGLQAFRQMLLALYGEL