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CsGy1G016290 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G016290
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRibosomal RNA small subunit methyltransferase G
Genome locationGy14Chr1:13257028..13258759
RNA-Seq ExpressionCsGy1G016290
SyntenyCsGy1G016290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65169.1 hypothetical protein Csa_019695 [Cucumis sativus]1.33e-4982.73Show/hide
Query:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET
        MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAE                  FLRKRYEYLMKNQPSTKDHYSNVET
Subjt:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET

Query:  VQQKQWKNQI
        VQQKQWKNQ+
Subjt:  VQQKQWKNQI

XP_008443848.1 PREDICTED: uncharacterized protein LOC103487344 [Cucumis melo]7.81e-4680Show/hide
Query:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET
        MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTL+AE                  FLRKRYEYLMKNQPSTKDHYSN ET
Subjt:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET

Query:  VQQKQWKNQI
        VQQKQ KNQ+
Subjt:  VQQKQWKNQI

XP_031742294.1 uncharacterized protein LOC101209712 [Cucumis sativus]1.38e-4782.73Show/hide
Query:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET
        MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAE                  FLRKRYEYLMKNQPSTKDHYSNVET
Subjt:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET

Query:  VQQKQWKNQI
        VQQKQWKNQ+
Subjt:  VQQKQWKNQI

XP_038879754.1 uncharacterized protein LOC120071506 isoform X1 [Benincasa hispida]2.12e-3669.23Show/hide
Query:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEK-------ETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKD
        MKKMKGVVSQYPV+EDSKTRFKHQSLLQDY DLEK       ETGTVKRKLQMMK KKMTL+AE                  FLRKRYEYLMKNQ ST D
Subjt:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEK-------ETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKD

Query:  HYSNVETVQQKQWKNQI
        HYSN E VQQKQ  NQ+
Subjt:  HYSNVETVQQKQWKNQI

XP_038879755.1 uncharacterized protein LOC120071506 isoform X2 [Benincasa hispida]3.58e-3973.64Show/hide
Query:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET
        MKKMKGVVSQYPV+EDSKTRFKHQSLLQDY DLEKETGTVKRKLQMMK KKMTL+AE                  FLRKRYEYLMKNQ ST DHYSN E 
Subjt:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET

Query:  VQQKQWKNQI
        VQQKQ  NQ+
Subjt:  VQQKQWKNQI

TrEMBL top hitse value%identityAlignment
A0A0A0LW13 Uncharacterized protein6.44e-5082.73Show/hide
Query:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET
        MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAE                  FLRKRYEYLMKNQPSTKDHYSNVET
Subjt:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET

Query:  VQQKQWKNQI
        VQQKQWKNQ+
Subjt:  VQQKQWKNQI

A0A1S3B8I5 uncharacterized protein LOC1034873443.78e-4680Show/hide
Query:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET
        MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTL+AE                  FLRKRYEYLMKNQPSTKDHYSN ET
Subjt:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET

Query:  VQQKQWKNQI
        VQQKQ KNQ+
Subjt:  VQQKQWKNQI

A0A5A7T0V7 Uncharacterized protein3.78e-4680Show/hide
Query:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET
        MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTL+AE                  FLRKRYEYLMKNQPSTKDHYSN ET
Subjt:  MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVET

Query:  VQQKQWKNQI
        VQQKQ KNQ+
Subjt:  VQQKQWKNQI

A0A6J1E279 uncharacterized protein LOC1114298973.64e-2963.64Show/hide
Query:  MKKMKGV--VSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNV
        MKKMKG   +SQYPVYED K RFKH  LL DY  LEKETGTVK KLQMMKQKKMTL+AE                  FLRKRYEYLM NQ STK+HYSN 
Subjt:  MKKMKGV--VSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNV

Query:  ETVQQKQWKN
        + +QQKQ+ N
Subjt:  ETVQQKQWKN

A0A6J1JK01 uncharacterized protein LOC1114857894.18e-3061.61Show/hide
Query:  MKKMKGVVS--QYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNV
        MKKMKG  +  QYPVYED K RFKHQ LL DY  LEKETGTVK KLQMMKQKKMTL+AE                  FLRKRYEYLM NQ ST DH+SN 
Subjt:  MKKMKGVVS--QYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNV

Query:  ETVQQKQWKNQI
        + +QQK++ NQ+
Subjt:  ETVQQKQWKNQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57910.1 unknown protein2.3e-0839.47Show/hide
Query:  YEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQP
        +ED K RF+H SL+QDY +L  ET  ++++LQ ++++K TLMAE                  FLR+RY +L ++QP
Subjt:  YEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGATGAAAGGAGTTGTCTCTCAATACCCTGTTTACGAGGATTCCAAGACTAGATTCAAGCATCAGAGTCTCCTCCAAGATTATCATGACTTGGAGAAG
GAAACAGGGACTGTCAAGAGGAAATTACAAATGATGAAGCAAAAGAAGATGACCCTAATGGCAGAGTCAGGTATAATCTTCATATTATTACTTTCTATTTGTATT
GATCTTCACAAGGAATTCTTAAGGAAGAGATATGAATACTTAATGAAGAACCAACCATCAACAAAAGACCATTATTCAAATGTAGAGACAGTGCAGCAGAAGCAA
TGGAAAAATCAAATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCTTCTTCGAGGAGGGAACGATGAGCAGCAAA
ACGATATCAAGATTTCTGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAGAAAAATTTCATGGCAAGATCAGGTAGCTTTAAGGGTTTGAGCTCA
TTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGATGAAAGGAGTTGTCTCTCAATACCCTGTTTACGAGGATTCCAAGACTAGATTCAAGCATCAGAGTCTCCTCCAAGATTATCATGACTTGGAGAAG
GAAACAGGGACTGTCAAGAGGAAATTACAAATGATGAAGCAAAAGAAGATGACCCTAATGGCAGAGTCAGGTATAATCTTCATATTATTACTTTCTATTTGTATT
GATCTTCACAAGGAATTCTTAAGGAAGAGATATGAATACTTAATGAAGAACCAACCATCAACAAAAGACCATTATTCAAATGTAGAGACAGTGCAGCAGAAGCAA
TGGAAAAATCAAATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCTTCTTCGAGGAGGGAACGATGAGCAGCAAA
ACGATATCAAGATTTCTGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAGAAAAATTTCATGGCAAGATCAGGTAGCTTTAAGGGTTTGAGCTCA
TTGTAA
Protein sequenceShow/hide protein sequence
MKKMKGVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAESGIIFILLLSICIDLHKEFLRKRYEYLMKNQPSTKDHYSNVETVQQKQ
WKNQIEEEELQTHYEPLRVDELKKSFFEEGTMSSKTISRFLHAGVLEMVQVELVKKNFMARSGSFKGLSSL