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CsGy1G016845 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G016845
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationGy14Chr1:14161363..14161836
RNA-Seq ExpressionCsGy1G016845
SyntenyCsGy1G016845
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046551.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]8.14e-2588.52Show/hide
Query:  MERLLLLLVFHANAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLLM
        ME+LLLLLVFHANAPPSTA PPP APAQLKRIHIGGALSPF FTYSVAVKYVA+I WD LM
Subjt:  MERLLLLLVFHANAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLLM

KAE8652979.1 hypothetical protein Csa_021104, partial [Cucumis sativus]2.51e-36100Show/hide
Query:  MERLLLLLVFHANAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLLM
        MERLLLLLVFHANAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLLM
Subjt:  MERLLLLLVFHANAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLLM

KAG6587964.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.12e-1163.08Show/hide
Query:  MERLLLLLVFHA-----NAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLL
        MERLLL+L FHA     NAPPS+APP   A A LKR HIG A SP  FTYS AVK   VI WDL+
Subjt:  MERLLLLLVFHA-----NAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLL

KAG7021854.1 Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma]1.53e-1164.06Show/hide
Query:  MERLLLLLVFHA-----NAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDL
        MERLLL+L FHA     NAPPS+APP   A A LKR HIG A SP  FTYS AVK   VI WDL
Subjt:  MERLLLLLVFHA-----NAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDL

TrEMBL top hitse value%identityAlignment
A0A5A7TZ04 Pentatricopeptide repeat-containing protein3.94e-2588.52Show/hide
Query:  MERLLLLLVFHANAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLLM
        ME+LLLLLVFHANAPPSTA PPP APAQLKRIHIGGALSPF FTYSVAVKYVA+I WD LM
Subjt:  MERLLLLLVFHANAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGCTGCTTCTACTGCTCGTCTTCCATGCAAATGCACCGCCGTCAACCGCTCCTCCTCCTCCTCCTGCACCTGCCCAGCTGAAAAGAATTCATATTGGAGGAGC
TTTATCTCCATTCTTCTTCACTTATTCAGTGGCAGTGAAATACGTTGCTGTAATATATTGGGATTTGCTGATGGTGAGGCGAAAGTTTGACGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGCTGCTTCTACTGCTCGTCTTCCATGCAAATGCACCGCCGTCAACCGCTCCTCCTCCTCCTCCTGCACCTGCCCAGCTGAAAAGAATTCATATTGGAGGAGC
TTTATCTCCATTCTTCTTCACTTATTCAGTGGCAGTGAAATACGTTGCTGTAATATATTGGGATTTGCTGATGGTGAGGCGAAAGTTTGACGAGTAG
Protein sequenceShow/hide protein sequence
MERLLLLLVFHANAPPSTAPPPPPAPAQLKRIHIGGALSPFFFTYSVAVKYVAVIYWDLLMVRRKFDE