CuGenDBv2

Gene ID	CsGy1G017445
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	BED-type domain-containing protein
Genome location	Gy14Chr1:15663633..15663938
RNA-Seq Expression	CsGy1G017445
Synteny	CsGy1G017445
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0032567.1 uncharacterized protein E6C27_scaffold43053G00270 [Cucumis melo var. makuwa]

3.09e-42

74.49

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA++SS+KD AWKY RLQN++D+NT + GFC K TKGGV+R+KQHLVGGYR ATA RKC DH KEEIK YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

KAA0053508.1 uncharacterized protein E6C27_scaffold190G00650 [Cucumis melo var. makuwa]

6.68e-44

73.47

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA++SS+KDLAWKY RLQN++D+NT +YGFC K TKGGV+R+KQHLVGGYR A A +KC DH KEEI+ YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

KAA0062939.1 hypothetical protein E6C27_scaffold468G00330 [Cucumis melo var. makuwa]

6.14e-41

75.51

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA +SS+KDLAWKY RLQN++D+NT + GFC K TKGGV+R+KQHLVGGYR ATA RKC DH KEEIK YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

TYK16403.1 uncharacterized protein E5676_scaffold21G001980 [Cucumis melo var. makuwa]

1.08e-45

75.51

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA++SS+KDLAWKY RLQN++D+NT + GFC K TKGGV+R+KQHLVGGYR ATA RKC DH KEEIK YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

XP_008460318.1 PREDICTED: uncharacterized protein LOC103499176 [Cucumis melo]

4.91e-44

73.47

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA++SS+KDLAWKY RLQN++D+NT +YGFC K TKGGV+R+KQHLVGGYR A A +KC DH KEEI+ YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CC76 uncharacterized protein LOC103499176

2.38e-44

73.47

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA++SS+KDLAWKY RLQN++D+NT +YGFC K TKGGV+R+KQHLVGGYR A A +KC DH KEEI+ YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

A0A5A7ST84 BED-type domain-containing protein

1.49e-42

74.49

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA++SS+KD AWKY RLQN++D+NT + GFC K TKGGV+R+KQHLVGGYR ATA RKC DH KEEIK YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

A0A5A7UEN1 DUF659 domain-containing protein

3.24e-44

73.47

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA++SS+KDLAWKY RLQN++D+NT +YGFC K TKGGV+R+KQHLVGGYR A A +KC DH KEEI+ YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

A0A5A7VBF9 BED-type domain-containing protein

2.97e-41

75.51

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA +SS+KDLAWKY RLQN++D+NT + GFC K TKGGV+R+KQHLVGGYR ATA RKC DH KEEIK YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

A0A5D3CWZ2 BED-type domain-containing protein

5.23e-46

75.51

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Query:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED
        MA++SS+KDLAWKY RLQN++D+NT + GFC K TKGGV+R+KQHLVGGYR ATA RKC DH KEEIK YMSKKKEIKEQRNLIVDID + YG E ED
Subjt:  MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G36095.1 DNA binding

3.4e-04

46.94

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Query:  FCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIK
        +C K T GGV   KQH++GG+R  T         +EEIK  M KK EIK
Subjt:  FCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIK

Sequences

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CDS sequence

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ATGGCTGAGGACAGTTCAAGAAAAGATCTAGCATGGAAATATGCTCGATTGCAAAATGAGCGAGATGTTAATACGTTATTGTATGGTTTTTGTTTAAAAGCAACTAAAGG
AGGAGTTTTTAGAATGAAACAACATCTCGTTGGTGGTTATAGAAAGGCCACAGCTGGTAGAAAATGCCTTGATCACGCGAAGGAAGAAATTAAAGCTTATATGTCCAAGA
AAAAGGAGATTAAAGAGCAAAGAAATTTGATTGTTGATATTGATGCAAAGACTTATGGTTTTGAATATGAAGATAACGATGTGTAA

mRNA sequence

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Protein sequence

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MAEDSSRKDLAWKYARLQNERDVNTLLYGFCLKATKGGVFRMKQHLVGGYRKATAGRKCLDHAKEEIKAYMSKKKEIKEQRNLIVDIDAKTYGFEYEDNDV

CsGy1G017445 (gene) of Cucumber (Gy14) v2.1 genome