CuGenDBv2

Gene ID	CsGy1G017460
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RING-type domain-containing protein
Genome location	Gy14Chr1:15671536..15672457
RNA-Seq Expression	CsGy1G017460
Synteny	CsGy1G017460
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0050039.1 putative E3 ubiquitin-protein ligase RHY1A [Cucumis melo var. makuwa]

1.08e-72

90.98

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDK GQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

XP_004146704.1 uncharacterized protein LOC101215379 [Cucumis sativus]

6.52e-89

100

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
        RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
Subjt:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS

XP_008443904.1 PREDICTED: uncharacterized protein LOC103487385 isoform X1 [Cucumis melo]

3.22e-74

91.8

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

XP_008443905.1 PREDICTED: uncharacterized protein LOC103487385 isoform X2 [Cucumis melo]

4.25e-72

91.8

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

XP_038876903.1 uncharacterized protein LOC120069257 [Benincasa hispida]

6.74e-62

81.97

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN +WSDSP IAAQ LTRRSVLCLYTSN+E+LL SNPS++R LL+EA  ++ELDG AREAKRRLD+RL RTQRKSED GREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSW KLNW GVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWJ8 Uncharacterized protein

3.16e-89

100

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
        RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS
Subjt:  RRKFSWRKLNWIGVEEDKCGQCLVKKTTWS

A0A1S3B9W3 uncharacterized protein LOC103487385 isoform X1

1.56e-74

91.8

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

A0A1S3B9Y1 uncharacterized protein LOC103487385 isoform X2

2.06e-72

91.8

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

A0A5A7U973 Putative E3 ubiquitin-protein ligase RHY1A

5.23e-73

90.98

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN IWSDSP + AQVLTRRSVLCLYTSN+EALL SNPSM+RRLLMEA GEDELDGIAREAKRRLDERL RTQRKSEDNGREMM
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
        RRKFSWRKLNWIGVEEDK GQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

A0A6J1E765 uncharacterized protein LOC111430042 isoform X2

7.41e-55

74.59

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Query:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM
        MAG LPGVECARRRRCHQN +WSDSP IAAQ LTRRSVLCLYTSN+E LL SNPS+ER LL+EA+ +D+LDG AREAKRRLDERL RTQRKS        
Subjt:  MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMM

Query:  RRKFSWRKLNWIGVEEDKCGQC
         RK +W KLNW GVE+DKCGQC
Subjt:  RRKFSWRKLNWIGVEEDKCGQC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G15580.1 RING/U-box superfamily protein

1.3e-11

40.87

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Query:  MAGTLPGVECARRRRCH------QNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGED---ELDGIAREAKRRLDERLL---RT
        MAG LPGVECARRRR H      ++S  +     A  V TRR    LYT+N+E+        ER +  ++ GED   +LDG A+EAK+RL++RL    RT
Subjt:  MAGTLPGVECARRRRCH------QNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGED---ELDGIAREAKRRLDERLL---RT

Query:  QRKSEDNGREMMRRK
        ++  +D G ++ + K
Subjt:  QRKSEDNGREMMRRK

AT2G15580.2 RING/U-box superfamily protein

4.8e-11

40.17

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Query:  MAGTLPGVECARRRRCH------QNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGED---ELDGIAREAKRRLDERLLRTQRK
        MAG LPGVECARRRR H      ++S  +     A  V TRR    LYT+N+E+        ER +  ++ GED   +LDG A+EAK+RL++RL    R 
Subjt:  MAGTLPGVECARRRRCH------QNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGED---ELDGIAREAKRRLDERLLRTQRK

Query:  SEDNGREMMRRKFSWRK
        S  +G+ +  +  +W K
Subjt:  SEDNGREMMRRKFSWRK

Sequences

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CDS sequence

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ATGGCCGGAACACTTCCTGGTGTAGAATGTGCTCGAAGAAGACGTTGTCATCAAAACAGTATATGGTCAGATTCACCGCTAATCGCCGCTCAGGTTTTAACTAGGAGATC
CGTTCTCTGCTTGTACACAAGTAACAACGAAGCGCTCCTCTTTTCAAATCCATCTATGGAGAGACGTTTGTTAATGGAGGCAGAAGGAGAAGATGAACTGGATGGAATTG
CGAGAGAAGCGAAGAGGAGATTGGATGAGCGATTGTTGAGAACGCAGAGGAAATCAGAAGATAATGGAAGAGAGATGATGAGGAGAAAATTCAGTTGGAGAAAGTTGAAT
TGGATTGGCGTCGAAGAAGATAAGTGCGGTCAATGCCTGGTGAAGAAGACGACTTGGAGTTGA

mRNA sequence

Show/hide mRNA sequence

CGTGAGTAGAATACTCATAATTTGGTACTAAAGAACTAATGGAAAGAGAGTTCAATATTCTTCTTTCCGGTGGGGCTAACTAAATTTACTCTAATCTGAAAGAAAACCAT
ATAATCAAATCAGACGCCACAAAGAAAAGCCCTAGATCTGTGCCGAAATTTCAATTTTCAAAGTTCCGTAAGTTTCTCCAATGGCCGGAACACTTCCTGGTGTAGAATGT
GCTCGAAGAAGACGTTGTCATCAAAACAGTATATGGTCAGATTCACCGCTAATCGCCGCTCAGGTTTTAACTAGGAGATCCGTTCTCTGCTTGTACACAAGTAACAACGA
AGCGCTCCTCTTTTCAAATCCATCTATGGAGAGACGTTTGTTAATGGAGGCAGAAGGAGAAGATGAACTGGATGGAATTGCGAGAGAAGCGAAGAGGAGATTGGATGAGC
GATTGTTGAGAACGCAGAGGAAATCAGAAGATAATGGAAGAGAGATGATGAGGAGAAAATTCAGTTGGAGAAAGTTGAATTGGATTGGCGTCGAAGAAGATAAGTGCGGT
CAATGCCTGGTGAAGAAGACGACTTGGAGTTGATTTTCAGTGAGTTTGTTCTTCATCTTCATCATGATTGG

Protein sequence

Show/hide protein sequence

MAGTLPGVECARRRRCHQNSIWSDSPLIAAQVLTRRSVLCLYTSNNEALLFSNPSMERRLLMEAEGEDELDGIAREAKRRLDERLLRTQRKSEDNGREMMRRKFSWRKLN
WIGVEEDKCGQCLVKKTTWS

CsGy1G017460 (gene) of Cucumber (Gy14) v2.1 genome