; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy1G017985 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G017985
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptioneukaryotic translation initiation factor
Genome locationGy14Chr1:16091679..16091984
RNA-Seq ExpressionCsGy1G017985
SyntenyCsGy1G017985
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0006417 - regulation of translation (biological process)
GO:0016281 - eukaryotic translation initiation factor 4F complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR003890 - MIF4G-like, type 3
IPR016021 - MIF4G-like domain superfamily
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ95977.1 eukaryotic translation initiation factor [Cucumis melo var. makuwa]7.37e-5295.83Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQE ERRDKDRLVKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

XP_004146671.1 eukaryotic translation initiation factor [Cucumis sativus]1.05e-5296.88Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

XP_008443845.1 PREDICTED: eukaryotic translation initiation factor [Cucumis melo]7.37e-5295.83Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQE ERRDKDRLVKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

XP_023531550.1 eukaryotic translation initiation factor-like [Cucurbita pepo subsp. pepo]1.61e-5192.71Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQM APEQE ERRDK+RL+KLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

XP_038878795.1 eukaryotic translation initiation factor-like [Benincasa hispida]1.05e-5194.79Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGRE+TFKRVLLNICQEAFEGADKLREEVRQMTAPEQE ERRDKDRLVKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

TrEMBL top hitse value%identityAlignment
A0A0A0LWG6 MI domain-containing protein5.08e-5396.88Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

A0A1S3B918 eukaryotic translation initiation factor3.57e-5295.83Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQE ERRDKDRLVKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

A0A5A7T0H9 Eukaryotic translation initiation factor3.57e-5295.83Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQE ERRDKDRLVKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

A0A5D3BA27 Eukaryotic translation initiation factor3.57e-5295.83Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQE ERRDKDRLVKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

A0A6J1E268 eukaryotic translation initiation factor3.17e-5192.71Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGRE+TFKRVLLNICQEAFEGADKLREE+RQMTAPEQE ERRDKDRL+KLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

SwissProt top hitse value%identityAlignment
Q03387 Eukaryotic translation initiation factor isoform 4G-11.1e-3673.96Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIF+KAV EPTFCPMYAQLCS+LN  LP FPS+EPGG+EITFKRVLLN CQEAFEGAD LR E+  +T P+QE E+RDK+R+ KLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

Q41583 Eukaryotic translation initiation factor isoform 4G-26.7e-3773.96Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIF+KAV EPTFCPMYAQLCS+LN  LP+FPS+EPGG+EITFKRVLLN CQEAFEGAD LR E+  +T P+QE E+RDK+R+ KLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

Q6K641 Eukaryotic translation initiation factor isoform 4G-22.1e-3879.17Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIF+KAVLEPTFCPMYAQLC DLN+KLP FPS+EPGG+EITFKRVLLN CQEAFEGAD LR EV ++T  +QE ERRDK+RLVKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

Q84PB3 Eukaryotic translation initiation factor isoform 4G-19.3e-3977.08Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++DVISLIF+KAV EPTFCPMYAQLCSDLN+KLP FPS+EPGG+EITFKRVLLN CQEAFEGA+ LR E+ ++T P+QE ERRDK+R+VKLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

Q93ZT6 Eukaryotic translation initiation factor isoform 4G-18.7e-3773.96Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++ VI+LIFDKAVLEPTFCPMYA+LCSD+N +LP FP  EPG +EITFKRVLLNICQEAFEGA +LREE+RQM+AP+QE ER DK++L+KL+TLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

Arabidopsis top hitse value%identityAlignment
AT1G62410.1 MIF4G domain-containing protein6.2e-3062.89Show/hide
Query:  LVMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        L +Q + +LIFDKAVLEPTFCPMYAQLC D+  K+P+FP   P   EI+FKRVLLN CQ+ FE  D L EE+R+M AP+QE ER D+ RL+ LRTLG
Subjt:  LVMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

AT2G24050.1 MIF4G domain-containing protein / MA3 domain-containing protein3.7e-3568.75Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        ++++VI LIF+ A+L+PTFC MYA LC D+N +LP FPS+EPGG+EITFKRVLLN CQEAFEGA KL+EE+RQMT P+QE ER DK+++ KLRTLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

AT3G60240.2 eukaryotic translation initiation factor 4G6.7e-1646.53Show/hide
Query:  LVMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQ----EGERRDKDRLVKLRTL
        + +  VIS IFDKA++EPTFC MYA  C  L+  LP F      G +ITFKR+LLN CQE FE  +K  EE  ++    Q    E ER +K   V+ R L
Subjt:  LVMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQ----EGERRDKDRLVKLRTL

Query:  G
        G
Subjt:  G

AT5G57870.1 MIF4G domain-containing protein / MA3 domain-containing protein6.2e-3873.96Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++ VI+LIFDKAVLEPTFCPMYA+LCSD+N +LP FP  EPG +EITFKRVLLNICQEAFEGA +LREE+RQM+AP+QE ER DK++L+KL+TLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG

AT5G57870.2 MIF4G domain-containing protein / MA3 domain-containing protein6.2e-3873.96Show/hide
Query:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG
        +++ VI+LIFDKAVLEPTFCPMYA+LCSD+N +LP FP  EPG +EITFKRVLLNICQEAFEGA +LREE+RQM+AP+QE ER DK++L+KL+TLG
Subjt:  VMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTAATGCAGGATGTCATTTCACTCATTTTTGACAAGGCTGTTCTTGAGCCCACATTTTGCCCCATGTATGCACAATTGTGTTCCGATCTGAACCAGAAGCTACC
TCAATTTCCCTCTGATGAACCGGGTGGTAGGGAAATTACTTTTAAACGAGTCCTCTTAAATATCTGTCAGGAGGCTTTTGAAGGTGCAGACAAGTTGAGGGAAGAGGTTA
GGCAGATGACTGCCCCTGAACAAGAGGGTGAGCGCAGAGATAAAGACAGACTTGTGAAACTTCGTACTCTTGGAATATTCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTAATGCAGGATGTCATTTCACTCATTTTTGACAAGGCTGTTCTTGAGCCCACATTTTGCCCCATGTATGCACAATTGTGTTCCGATCTGAACCAGAAGCTACC
TCAATTTCCCTCTGATGAACCGGGTGGTAGGGAAATTACTTTTAAACGAGTCCTCTTAAATATCTGTCAGGAGGCTTTTGAAGGTGCAGACAAGTTGAGGGAAGAGGTTA
GGCAGATGACTGCCCCTGAACAAGAGGGTGAGCGCAGAGATAAAGACAGACTTGTGAAACTTCGTACTCTTGGAATATTCGATTGA
Protein sequenceShow/hide protein sequence
MLVMQDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLGIFD