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CsGy1G018450 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G018450
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
Genome locationGy14Chr1:16579639..16580602
RNA-Seq ExpressionCsGy1G018450
SyntenyCsGy1G018450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649664.1 hypothetical protein Csa_023752, partial [Cucumis sativus]7.14e-2971.79Show/hide
Query:  KSPFFKSIHLKILTPFETPSHTETLCCQPSITPTACFHCRRRRLPTPKNPRARSQSFGNPDPSVRNAHLHSKKPIRNP
        K PF+K IH K     + P+HT+TLC +PS T T CFHCRRRRLPTPK PRARSQSFGNP PSV N HLHSKKPIRNP
Subjt:  KSPFFKSIHLKILTPFETPSHTETLCCQPSITPTACFHCRRRRLPTPKNPRARSQSFGNPDPSVRNAHLHSKKPIRNP
KAE8653071.1 hypothetical protein Csa_020114 [Cucumis sativus]5.44e-2050Show/hide
Query:  VVHNSDRLLPLSSTTSTHPKEPRARSQSFGSPGPSVRNAHLHSKKPIRNPPHTSKPSAARRPQIRPFAANVVDDICPPQRTSCTRSQSFGNPC------P
         VH S RLLPLSSTTSTHPKEP  RSQSFG+PGPS        K P   P  T KPSAA R Q+RP A+ VVDD+ PPQRT          P        
Subjt:  VVHNSDRLLPLSSTTSTHPKEPRARSQSFGSPGPSVRNAHLHSKKPIRNPPHTSKPSAARRPQIRPFAANVVDDICPPQRTSCTRSQSFGNPC------P

Query:  SVRNAHLHSKKSIRNP
        S+R     +  + RNP
Subjt:  SVRNAHLHSKKSIRNP
TrEMBL top hitse value%identityAlignment
A0A0A0LWC3 Uncharacterized protein1.64e-2936.71Show/hide
Query:  VVHNSDRLLPLSSTTSTHPKEPRARSQSFGSPGPSVRNAHLHSKKPIRNP--------------------------------------------------
         VH S RLLPLSSTTSTHPKEP  RSQSFG+PGPS        K P   P                                                  
Subjt:  VVHNSDRLLPLSSTTSTHPKEPRARSQSFGSPGPSVRNAHLHSKKPIRNP--------------------------------------------------

Query:  --------PHTSK-PSAARRPQIRPFAANVVDDICPPQRTSC----------------------------------------------------------
                PHT + PSA  RPQ+RP A+ VVDD+ PPQRT                                                            
Subjt:  --------PHTSK-PSAARRPQIRPFAANVVDDICPPQRTSC----------------------------------------------------------

Query:  -TRSQSFGNPCPSVRNAHLHSKKSIRNPPYSQFIVGT
          RSQSFGNPCPSVRNAHLHSKKSIRNPP+SQFIVGT
Subjt:  -TRSQSFGNPCPSVRNAHLHSKKSIRNPPYSQFIVGT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATTAAAAGGCTACCCGAGAAGGAAGAGGCAGGAAAAGGAGGAAAGAAATTTTTTATAGTATATAAAGTATATAAATCACCATTTTTTAAATCCATTCATTTGAA
AATCCTCACCCCATTCGAAACCCCCTCGCACACTGAAACCCTCTGCTGCCAGCCGTCCATCACTCCGACCGCTTGCTTCCATTGTCGTCGACGACGTCTACCCACCCCAA
AGAACCCCCGCGCGCGAAGTCAATCTTTTGGAAACCCCGACCCATCCGTTCGAAACGCTCACCTCCATTCGAAAAAACCCATTCGAAACCCCCACACACACCGAAACCCT
CTGCAAACGGTCGTCCACAACTCCGACCGCTTGCTTCCATTGTCGTCGACGACGTCTACCCACCCCAAAGAACCCCGCGCGCGAAGTCAATCTTTTGGAAGCCCCGGCCC
ATCCGTTCGAAACGCTCACCTCCATTCAAAAAAACCCATTCGAAACCCCCCACACACATCGAAACCCTCTGCCGCCAGACGTCCACAAATCCGACCGTTTGCTGCCAATG
TCGTCGACGACATCTGCCCACCCCAAAGGACGAGCTGCACGCGAAGTCAATCTTTTGGAAACCCCTGCCCATCCGTTCGAAACGCTCACCTCCATTCGAAAAAATCTATT
CGAAACCCCCCATACTCACAGTTCATCGTCGGAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATATTAAAAGGCTACCCGAGAAGGAAGAGGCAGGAAAAGGAGGAAAGAAATTTTTTATAGTATATAAAGTATATAAATCACCATTTTTTAAATCCATTCATTTGAA
AATCCTCACCCCATTCGAAACCCCCTCGCACACTGAAACCCTCTGCTGCCAGCCGTCCATCACTCCGACCGCTTGCTTCCATTGTCGTCGACGACGTCTACCCACCCCAA
AGAACCCCCGCGCGCGAAGTCAATCTTTTGGAAACCCCGACCCATCCGTTCGAAACGCTCACCTCCATTCGAAAAAACCCATTCGAAACCCCCACACACACCGAAACCCT
CTGCAAACGGTCGTCCACAACTCCGACCGCTTGCTTCCATTGTCGTCGACGACGTCTACCCACCCCAAAGAACCCCGCGCGCGAAGTCAATCTTTTGGAAGCCCCGGCCC
ATCCGTTCGAAACGCTCACCTCCATTCAAAAAAACCCATTCGAAACCCCCCACACACATCGAAACCCTCTGCCGCCAGACGTCCACAAATCCGACCGTTTGCTGCCAATG
TCGTCGACGACATCTGCCCACCCCAAAGGACGAGCTGCACGCGAAGTCAATCTTTTGGAAACCCCTGCCCATCCGTTCGAAACGCTCACCTCCATTCGAAAAAATCTATT
CGAAACCCCCCATACTCACAGTTCATCGTCGGAACCTGA
Protein sequenceShow/hide protein sequence
MNIKRLPEKEEAGKGGKKFFIVYKVYKSPFFKSIHLKILTPFETPSHTETLCCQPSITPTACFHCRRRRLPTPKNPRARSQSFGNPDPSVRNAHLHSKKPIRNPHTHRNP
LQTVVHNSDRLLPLSSTTSTHPKEPRARSQSFGSPGPSVRNAHLHSKKPIRNPPHTSKPSAARRPQIRPFAANVVDDICPPQRTSCTRSQSFGNPCPSVRNAHLHSKKSI
RNPPYSQFIVGT