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CsGy1G018495 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G018495
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGTP-binding nuclear protein Ran-3-like
Genome locationGy14Chr1:16659325..16660456
RNA-Seq ExpressionCsGy1G018495
SyntenyCsGy1G018495
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589876.1 hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sororia]2.78e-6379.07Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSS---NWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMT
        MAT+L TF P  IRACASSAD    H+RRKTSSSS   NWWAPVFGWSSEPDYIDSGNK+ P+NLA G SK D ETKS R RFSPGCFTE+KARQLR+MT
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSS---NWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMT

Query:  TETESFHDVMYHSAIASRLASDFKSREDS
         ETESFHDVMYHSAIASRLA+DFKSR DS
Subjt:  TETESFHDVMYHSAIASRLASDFKSREDS

XP_011656185.1 uncharacterized protein LOC105435656 [Cucumis sativus]2.69e-86100Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLASDFKSREDS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

XP_016903293.1 PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo]1.32e-7590.55Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSG-NKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE
        MATNLLTF PAGIRACA+SADRRSD +RRK SSS+NWWAPVFGWSSEPDYIDS  NKAEPQNLAG +SKPDLETKS+RGRFSPGCFTEAKARQLRMMTTE
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSG-NKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE

Query:  TESFHDVMYHSAIASRLASDFKSREDS
        TESFHDVMYHSAIASRLASDFKSR DS
Subjt:  TESFHDVMYHSAIASRLASDFKSREDS

XP_022960569.1 uncharacterized protein LOC111461308 [Cucurbita moschata]4.07e-6377.78Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNL TF P  IRACASSAD     +   +SSSSNWWAPVFGWSSEPDYIDSGNK+ P+NLA G SK D ETKS R RFSPGCFTE+KARQLR+MT ET
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLA+DFKSR DS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

XP_038880363.1 uncharacterized protein LOC120072011 [Benincasa hispida]9.39e-7891.27Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNLLTFPPAGIRACA+SADRRSDH+RRKTSSSSNWWAPVFGWSSEPDYIDS NKAEPQ+LAGG SK D ETKS+R RFSPGCFTEAKARQLRMMTTET
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLASDFK+R DS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

TrEMBL top hitse value%identityAlignment
A0A0A0LTN7 Uncharacterized protein1.30e-86100Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLASDFKSREDS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

A0A1S4E4Y4 uncharacterized protein LOC1035027476.41e-7690.55Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSG-NKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE
        MATNLLTF PAGIRACA+SADRRSD +RRK SSS+NWWAPVFGWSSEPDYIDS  NKAEPQNLAG +SKPDLETKS+RGRFSPGCFTEAKARQLRMMTTE
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSG-NKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE

Query:  TESFHDVMYHSAIASRLASDFKSREDS
        TESFHDVMYHSAIASRLASDFKSR DS
Subjt:  TESFHDVMYHSAIASRLASDFKSREDS

A0A5D3CSV6 Uncharacterized protein6.41e-7690.55Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSG-NKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE
        MATNLLTF PAGIRACA+SADRRSD +RRK SSS+NWWAPVFGWSSEPDYIDS  NKAEPQNLAG +SKPDLETKS+RGRFSPGCFTEAKARQLRMMTTE
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSG-NKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE

Query:  TESFHDVMYHSAIASRLASDFKSREDS
        TESFHDVMYHSAIASRLASDFKSR DS
Subjt:  TESFHDVMYHSAIASRLASDFKSREDS

A0A6J1HBD8 uncharacterized protein LOC1114613081.97e-6377.78Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET
        MATNL TF P  IRACASSAD     +   +SSSSNWWAPVFGWSSEPDYIDSGNK+ P+NLA G SK D ETKS R RFSPGCFTE+KARQLR+MT ET
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTET

Query:  ESFHDVMYHSAIASRLASDFKSREDS
        ESFHDVMYHSAIASRLA+DFKSR DS
Subjt:  ESFHDVMYHSAIASRLASDFKSREDS

A0A6J1JBM9 uncharacterized protein LOC1114853091.21e-6178.74Show/hide
Query:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSS-NWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE
        MATNL TF P  IRACASSAD    H+RRKTSSSS NWWAPVFGWSSEPDYIDS NK+ P+  A G SK D ETKS R RFSPGCFTE+KARQLR+MT E
Subjt:  MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSS-NWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTE

Query:  TESFHDVMYHSAIASRLASDFKSREDS
        TESFHDVMYHSAIASRLA+DFKSR DS
Subjt:  TESFHDVMYHSAIASRLASDFKSREDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52720.1 unknown protein4.7e-1948.21Show/hide
Query:  IRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRG-RFSPGCFTEAKARQLRMMTTETESFHDVMYHSA
        IRA + S     D +R+K   S+ WWAP+FG  S+PDY++  +     N       PD    S  G +F  GCFTE KA+QLR  T E  +FHDVMYHSA
Subjt:  IRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRG-RFSPGCFTEAKARQLRMMTTETESFHDVMYHSA

Query:  IASRLASDFKSR
        IASRLASD   R
Subjt:  IASRLASDFKSR

AT3G15630.1 unknown protein1.0e-1849.52Show/hide
Query:  ADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD
        A   SD +R+K  SS +WWAP+FG SSEPDY++     E       S     E +SLR      C TE KA+QLR  T E  +FHDVMYHSAIASRLASD
Subjt:  ADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHSAIASRLASD

Query:  FKSRE
         + ++
Subjt:  FKSRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTAATCTCCTCACTTTCCCCCCTGCCGGAATCCGTGCCTGTGCCTCCTCCGCCGACCGCCGCTCAGACCATAGCCGTCGCAAAACCTCATCCTCTTCCAACTG
GTGGGCCCCCGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGGCAACAAGGCTGAACCTCAGAACCTTGCCGGCGGTTCTTCCAAGCCAGATCTGGAGACGA
AATCCCTCAGGGGTCGATTTTCCCCTGGATGCTTCACGGAAGCGAAGGCTCGGCAGCTGCGAATGATGACGACGGAAACGGAGTCGTTTCACGACGTTATGTACCACTCG
GCCATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGCGAAGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
CGTGTGATCTACATACATTGGTGATATGATTAAACTTGTTGGGGGTGGCCACGAAAGCATGTAACCTAAATAGCCGGTAAAAAGTGGACGATAAAGCACACCTCTACCCC
ACGCGTCTTTAAAGGCCAAACCGCCACGTGTCCGCTCTTATCCGTTCACAGTTTCTTCCATTTTTAAATCCCCACCCAAAAGGTACTCTAAAAAAGCAACACCCTATTTC
CTCTCTTTTTCTACAAACCACCTTCCCATCCTCTCTCTCTCTCTAAAATGGCCACTAATCTCCTCACTTTCCCCCCTGCCGGAATCCGTGCCTGTGCCTCCTCCGCCGAC
CGCCGCTCAGACCATAGCCGTCGCAAAACCTCATCCTCTTCCAACTGGTGGGCCCCCGTCTTCGGCTGGTCCTCCGAACCCGACTATATTGACTCCGGCAACAAGGCTGA
ACCTCAGAACCTTGCCGGCGGTTCTTCCAAGCCAGATCTGGAGACGAAATCCCTCAGGGGTCGATTTTCCCCTGGATGCTTCACGGAAGCGAAGGCTCGGCAGCTGCGAA
TGATGACGACGGAAACGGAGTCGTTTCACGACGTTATGTACCACTCGGCCATCGCATCTCGTCTGGCTTCCGACTTCAAAAGTCGCGAAGATTCTTGATCCGGCGGCCGC
TCATCCCTCTTATTTACTACTTTGCAATTATGTACGTTGAATGTTGTATAAATGAAACGCAAATTTCAGGGATAAAGAGTTGTAAACTCTTCTTTTTCTGTTTTTTCTTT
TTAAATTCTGATCTTCAATCGTGGGTTTGGGAGGTTTAATTTTATTGAAGAAAGAAGAAGAAGATGTTGATGTAATTATAAATGTATTAAATTAACTTTTAAATTGGGGT
CCAGCTGCCCACCATGACGTGGCATTCTTAAATAAGTGATTAATTTGAGGTTATGGGATGTAAGCACTGATCACCAATTTCATTAGGGTACAACAATTTGAGGGCTACTA
ATTAACCTTTCTTGCCAATTTAGAAGAAGAGTAAAAATAACCCAATTATATTTATACACTGGAAAGATAGATAATTTGTTATATAATATAATTAACAAATCTAATAACCA
CCTTCTAATCCACTAACTAAACTTAACCTCTC
Protein sequenceShow/hide protein sequence
MATNLLTFPPAGIRACASSADRRSDHSRRKTSSSSNWWAPVFGWSSEPDYIDSGNKAEPQNLAGGSSKPDLETKSLRGRFSPGCFTEAKARQLRMMTTETESFHDVMYHS
AIASRLASDFKSREDS