; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy1G018800 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G018800
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGlial fibrillary acidic protein-like
Genome locationGy14Chr1:17012751..17013524
RNA-Seq ExpressionCsGy1G018800
SyntenyCsGy1G018800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.36e-5743.58Show/hide
Query:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER---------
        M+ VLATENE LR+EVK+WVQ+A   +R L+EA+R   ++ ELEK+ +SLN EAIQ+RKKNKRLLR+IA +H E EA+KVCI +LK E+E+         
Subjt:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER---------

Query:  ------------------------------------------ETVTSFEHQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQ
                                                  + V S E QLLICR AR+V+T+D+A+L+ +++E+  DF +W+D+Y  +R +Y+   R+
Subjt:  ------------------------------------------ETVTSFEHQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQ

Query:  IEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH
        +E+G +KLR MA ++ Q S +A  L++ ++PT+  D ELSHFL IIG  LGRFGCYH
Subjt:  IEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH

KAA0033848.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.36e-5855.29Show/hide
Query:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRE--LKQELERETVTSFE
        M+ VL  ENEGLR+EV         S+ + +E +  L+  S++  D  S  +E        +R+   I  + +  +  K+ I E   K  L +E V S E
Subjt:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRE--LKQELERETVTSFE

Query:  HQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQIEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHY
        HQLLICRNAR+VVTEDHARL NEHKEVL DFAIWRD+YNIMRH+YE V+ QIEQG KKLRHMAR + Q STR I LQ++IVP QRG RELS FL IIGHY
Subjt:  HQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQIEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHY

Query:  LGRFGCYH
        LG FGCYH
Subjt:  LGRFGCYH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.84e-4347.72Show/hide
Query:  RQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVC---------IRELKQEL-ERET--------VTSFEHQLLICRNARK
        R L+EA+R   ++ ELEK+ +SLN EAIQ+RKKNKRLLR+IA +H E EA+K           I E K +L E E+        V S E QLLICR ARK
Subjt:  RQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVC---------IRELKQEL-ERET--------VTSFEHQLLICRNARK

Query:  VVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQIEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH
        V+T+D+A+L+ +++E+  DF +W+D+Y  +R +Y+    ++E+G +KLR MAR++ Q S +A  L++ ++PT+  D+ELSHFL IIG  LGRF CYH
Subjt:  VVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQIEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.86e-5743.19Show/hide
Query:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER---------
        M+ VLATENE LR+EVK+WVQ+A  ++R L+EA+R   ++ ELEK+ +SLN EAIQ+RKKNKRLLR+IA +H E EA+KVCI +LK E+E+         
Subjt:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER---------

Query:  ------------------------------------------ETVTSFEHQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQ
                                                  + V S E QLLICR AR+V+ +D+A+L+ +++E+  DF +W+D+Y  +R +Y+    +
Subjt:  ------------------------------------------ETVTSFEHQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQ

Query:  IEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH
        +E+G +KLR MAR++ Q S +A  L++ ++PT+  D+ELSHFL IIG  LGRFGCYH
Subjt:  IEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH

KGN65327.1 hypothetical protein Csa_019964 [Cucumis sativus]7.77e-4976.56Show/hide
Query:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELERETVTSFEHQ
        MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER +    + Q
Subjt:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELERETVTSFEHQ

Query:  LLICRNA---RKVVTEDHA--RLLNEHK
          +   A   +++ T+  A   L  E+K
Subjt:  LLICRNA---RKVVTEDHA--RLLNEHK

TrEMBL top hitse value%identityAlignment
A0A0A0LWU7 Uncharacterized protein3.76e-4976.56Show/hide
Query:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELERETVTSFEHQ
        MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER +    + Q
Subjt:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELERETVTSFEHQ

Query:  LLICRNA---RKVVTEDHA--RLLNEHK
          +   A   +++ T+  A   L  E+K
Subjt:  LLICRNA---RKVVTEDHA--RLLNEHK

A0A5A7SM49 Glial fibrillary acidic protein-like6.58e-5843.58Show/hide
Query:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER---------
        M+ VLATENE LR+EVK+WVQ+A   +R L+EA+R   ++ ELEK+ +SLN EAIQ+RKKNKRLLR+IA +H E EA+KVCI +LK E+E+         
Subjt:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER---------

Query:  ------------------------------------------ETVTSFEHQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQ
                                                  + V S E QLLICR AR+V+T+D+A+L+ +++E+  DF +W+D+Y  +R +Y+   R+
Subjt:  ------------------------------------------ETVTSFEHQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQ

Query:  IEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH
        +E+G +KLR MA ++ Q S +A  L++ ++PT+  D ELSHFL IIG  LGRFGCYH
Subjt:  IEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH

A0A5A7TXA1 Glial fibrillary acidic protein-like1.37e-4347.72Show/hide
Query:  RQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVC---------IRELKQEL-ERET--------VTSFEHQLLICRNARK
        R L+EA+R   ++ ELEK+ +SLN EAIQ+RKKNKRLLR+IA +H E EA+K           I E K +L E E+        V S E QLLICR ARK
Subjt:  RQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVC---------IRELKQEL-ERET--------VTSFEHQLLICRNARK

Query:  VVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQIEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH
        V+T+D+A+L+ +++E+  DF +W+D+Y  +R +Y+    ++E+G +KLR MAR++ Q S +A  L++ ++PT+  D+ELSHFL IIG  LGRF CYH
Subjt:  VVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQIEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH

A0A5A7VDD9 Glial fibrillary acidic protein-like1.87e-5743.19Show/hide
Query:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER---------
        M+ VLATENE LR+EVK+WVQ+A  ++R L+EA+R   ++ ELEK+ +SLN EAIQ+RKKNKRLLR+IA +H E EA+KVCI +LK E+E+         
Subjt:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELER---------

Query:  ------------------------------------------ETVTSFEHQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQ
                                                  + V S E QLLICR AR+V+ +D+A+L+ +++E+  DF +W+D+Y  +R +Y+    +
Subjt:  ------------------------------------------ETVTSFEHQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQ

Query:  IEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH
        +E+G +KLR MAR++ Q S +A  L++ ++PT+  D+ELSHFL IIG  LGRFGCYH
Subjt:  IEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH

A0A5D3BQ93 Glial fibrillary acidic protein-like6.60e-5955.29Show/hide
Query:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRE--LKQELERETVTSFE
        M+ VL  ENEGLR+EV         S+ + +E +  L+  S++  D  S  +E        +R+   I  + +  +  K+ I E   K  L +E V S E
Subjt:  MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRE--LKQELERETVTSFE

Query:  HQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQIEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHY
        HQLLICRNAR+VVTEDHARL NEHKEVL DFAIWRD+YNIMRH+YE V+ QIEQG KKLRHMAR + Q STR I LQ++IVP QRG RELS FL IIGHY
Subjt:  HQLLICRNARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQIEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHY

Query:  LGRFGCYH
        LG FGCYH
Subjt:  LGRFGCYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCATGTCCTAGCAACAGAGAATGAAGGACTGAGGAAAGAAGTCAAACGATGGGTGCAAAAAGCTACAACTTCTGAAAGGCAACTTGAAGAAGCGCAACGA
CATCTTCAAAGACAGTCAGAGTTGGAAAAAGACATGAATTCTTTAAACATTGAAGCTATTCAAATTAGAAAGAAAAACAAAAGATTACTGAGAGATATTGCTACT
ATGCATAGTGAAGCTGAAGCTCAAAAAGTGTGCATTAGAGAATTGAAGCAGGAATTAGAAAGAGAGACTGTTACAAGTTTTGAACACCAGCTGTTGATTTGTCGC
AATGCACGAAAGGTGGTAACAGAAGATCATGCTCGATTATTGAACGAGCACAAAGAAGTGTTAGGAGATTTTGCAATTTGGAGAGATGACTATAACATTATGAGA
CACAGATATGAGGTTGTTAGAAGACAAATTGAACAAGGAACGAAAAAGCTAAGGCATATGGCAAGAATGTCATATCAGCTCTCAACACGAGCTATAGTCCTTCAG
GAAAACATTGTACCAACACAACGAGGCGATCGAGAGTTGTCCCACTTTCTAGAGATTATAGGGCATTATCTTGGGCGTTTTGGGTGCTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCATGTCCTAGCAACAGAGAATGAAGGACTGAGGAAAGAAGTCAAACGATGGGTGCAAAAAGCTACAACTTCTGAAAGGCAACTTGAAGAAGCGCAACGA
CATCTTCAAAGACAGTCAGAGTTGGAAAAAGACATGAATTCTTTAAACATTGAAGCTATTCAAATTAGAAAGAAAAACAAAAGATTACTGAGAGATATTGCTACT
ATGCATAGTGAAGCTGAAGCTCAAAAAGTGTGCATTAGAGAATTGAAGCAGGAATTAGAAAGAGAGACTGTTACAAGTTTTGAACACCAGCTGTTGATTTGTCGC
AATGCACGAAAGGTGGTAACAGAAGATCATGCTCGATTATTGAACGAGCACAAAGAAGTGTTAGGAGATTTTGCAATTTGGAGAGATGACTATAACATTATGAGA
CACAGATATGAGGTTGTTAGAAGACAAATTGAACAAGGAACGAAAAAGCTAAGGCATATGGCAAGAATGTCATATCAGCTCTCAACACGAGCTATAGTCCTTCAG
GAAAACATTGTACCAACACAACGAGGCGATCGAGAGTTGTCCCACTTTCTAGAGATTATAGGGCATTATCTTGGGCGTTTTGGGTGCTACCATTAG
Protein sequenceShow/hide protein sequence
MSHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKNKRLLRDIATMHSEAEAQKVCIRELKQELERETVTSFEHQLLICR
NARKVVTEDHARLLNEHKEVLGDFAIWRDDYNIMRHRYEVVRRQIEQGTKKLRHMARMSYQLSTRAIVLQENIVPTQRGDRELSHFLEIIGHYLGRFGCYH