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CsGy1G018910 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G018910
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRibosomal protein
Genome locationGy14Chr1:17207368..17209647
RNA-Seq ExpressionCsGy1G018910
SyntenyCsGy1G018910
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000473 - Ribosomal protein L36
IPR035977 - Ribosomal protein L36 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023520.1 rpmJ, partial [Cucurbita argyrosperma subsp. argyrosperma]1.77e-5687Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLST ASEGPSP LF  +EVKQEILPSHS RTGLASL+PQK+EPTM +GWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
XP_004150587.2 uncharacterized protein LOC101223220 [Cucumis sativus]6.78e-9598.6Show/hide
Query:  MEEQSSIIHTLFSPSSQLLTVTLDPRVFAKKSFIFSLNLCINAMKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEV
        MEE+SSIIHTLFSPSSQLLTVTLDPRVFAKKSFIFSLNLCINAMKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEV
Subjt:  MEEQSSIIHTLFSPSSQLLTVTLDPRVFAKKSFIFSLNLCINAMKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEV

Query:  KQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        KQEILPS SLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
Subjt:  KQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
XP_008443993.2 PREDICTED: uncharacterized protein LOC103487446 [Cucumis melo]1.12e-5994Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFA EGPSPSLFSRTEVKQEILPS   R GLASLIPQKNEPTM LGWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
XP_022144930.1 uncharacterized protein LOC111014487 [Momordica charantia]7.52e-5890Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFASEGPSP LFSR+EVKQEILPS+S RTGLASLIPQK+EPT   GWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
XP_038879717.1 uncharacterized protein LOC120071478 [Benincasa hispida]1.85e-5890Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFASEGP PSLFSR+EVKQE+LPSHS RTGLASLIPQK+EPTM LGWRMGLASILLKK N
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
TrEMBL top hitse value%identityAlignment
A0A1S3B8W2 Ribosomal protein5.41e-6094Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFA EGPSPSLFSRTEVKQEILPS   R GLASLIPQKNEPTM LGWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
A0A5A7U4L3 Ribosomal protein5.41e-6094Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFA EGPSPSLFSRTEVKQEILPS   R GLASLIPQKNEPTM LGWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
A0A6J1CT08 Ribosomal protein3.64e-5890Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFASEGPSP LFSR+EVKQEILPS+S RTGLASLIPQK+EPT   GWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
A0A6J1EZS5 Ribosomal protein1.22e-5688Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTV+R+GRVYIYCS+NPKHKQRQGLSTFASE PSPSLFSR+EVKQEILPSHS RTGLASLIPQK+EPTM  GWRMGLASIL KK N
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
A0A6J1JBN8 Ribosomal protein1.73e-5687Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
        MKVR+SVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLST ASEGPSP LF  +EVKQEILPSHS RTGLASL+PQK+EPTM  GWRMGLASILLKKHN
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN
SwissProt top hitse value%identityAlignment
A5VLI2 50S ribosomal protein L361.3e-0976.32Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVKKMCE C+ VKR GRV + CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
B2G8V5 50S ribosomal protein L361.3e-0976.32Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVKKMCE C+ VKR GRV + CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
B3WAJ5 50S ribosomal protein L364.4e-1078.95Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVKKMCE C+ V+RKGRV I CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
Q035A6 50S ribosomal protein L364.4e-1078.95Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVKKMCE C+ V+RKGRV I CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
Q03PY0 50S ribosomal protein L361.7e-0973.68Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MKVR SVK MCE C+ +KRKGRV + CS+NPKHKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
Arabidopsis top hitse value%identityAlignment
AT5G20180.1 Ribosomal protein L368.7e-3063.11Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPS-LFSRTEVKQEI--LPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLK
        MKVRSSVKKMCEFC+TVKR+GRVY+ CSSNPKHKQRQG S+FA EG +PS LF+     QE+  LP   +  GLASL+ ++  PT + GWR GLASIL K
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPS-LFSRTEVKQEI--LPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLK

Query:  KHN
        + N
Subjt:  KHN
AT5G20180.2 Ribosomal protein L368.7e-3063.11Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPS-LFSRTEVKQEI--LPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLK
        MKVRSSVKKMCEFC+TVKR+GRVY+ CSSNPKHKQRQG S+FA EG +PS LF+     QE+  LP   +  GLASL+ ++  PT + GWR GLASIL K
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPS-LFSRTEVKQEI--LPSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLK

Query:  KHN
        + N
Subjt:  KHN
ATCG00760.1 ribosomal protein L364.2e-0860.53Show/hide
Query:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG
        MK+R+SV+K+CE CR ++R+GR+ + C SNP+HKQRQG
Subjt:  MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGCAAAGTTCCATAATCCATACTTTGTTTAGTCCTTCGTCTCAGCTGCTGACCGTCACTCTCGATCCGAGGGTATTTGCCAAGAAATCATTCATTTTT
TCACTTAACCTTTGCATCAACGCCATGAAAGTCCGTTCTTCGGTGAAAAAGATGTGCGAATTTTGTAGGACAGTGAAGCGTAAAGGCCGGGTATATATATACTGC
TCATCTAATCCCAAACACAAGCAACGCCAGGGCCTGTCTACATTTGCAAGTGAAGGTCCTTCTCCTTCCTTGTTCTCAAGAACCGAGGTGAAGCAAGAGATTCTT
CCCAGTCATAGTTTGCGAACAGGGCTGGCTTCTCTCATCCCCCAAAAGAACGAGCCAACAATGTTTCTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAG
AAACACAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGCAAAGTTCCATAATCCATACTTTGTTTAGTCCTTCGTCTCAGCTGCTGACCGTCACTCTCGATCCGAGGGTATTTGCCAAGAAATCATTCATTTTT
TCACTTAACCTTTGCATCAACGCCATGAAAGTCCGTTCTTCGGTGAAAAAGATGTGCGAATTTTGTAGGACAGTGAAGCGTAAAGGCCGGGTATATATATACTGC
TCATCTAATCCCAAACACAAGCAACGCCAGGGCCTGTCTACATTTGCAAGTGAAGGTCCTTCTCCTTCCTTGTTCTCAAGAACCGAGGTGAAGCAAGAGATTCTT
CCCAGTCATAGTTTGCGAACAGGGCTGGCTTCTCTCATCCCCCAAAAGAACGAGCCAACAATGTTTCTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAG
AAACACAATTAGCTTAGTAGTAAACAAAAAGGAAGAAAGAATAATAGTTATTGGTTTCTCTTTGACCTCTGGTTGGCAATACCAGTATTTTCAACTAGGATTATA
CTCCTAAAAAGAAATAAGCACTGCTGCTCTGAGTTTTGTTCTGTTTGGGTTGGTTTTGATATTTAGAATTGGAGGAAGTGAAGGTGTTACATTGAATATCATAAT
TGTGTTGTTTTACTGATCTGCTAGCCATTTATAATGTTGTGATTTTCAATCCTTAATTTTCTTCCAAGTTATTCTGAAATCCTCAAGTATATAATTTAGTTAAAT
TGTATGCTAACAAGTTGGGAAAGTTCAAATGCTATTTAAGTCTCAGTTTTCGTATCCATTTCAACTGGATAATGTACTACAATAATGCATTTCTTAAAATCTATT
ATCAAAATATTGTTGTTTTGAAACTTTTTACCAATATTTTC
Protein sequenceShow/hide protein sequence
MEEQSSIIHTLFSPSSQLLTVTLDPRVFAKKSFIFSLNLCINAMKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEIL
PSHSLRTGLASLIPQKNEPTMFLGWRMGLASILLKKHN