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CsGy1G019090 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G019090
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionBasic helix-loop-helix transcription factor
Genome locationGy14Chr1:17525962..17526350
RNA-Seq ExpressionCsGy1G019090
SyntenyCsGy1G019090
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR024097 - Basic helix-loop-helix leucine zipper transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653117.1 hypothetical protein Csa_019752 [Cucumis sativus]5.05e-53100Show/hide
Query:  MVKSENEAFDSTFPFSSNKVKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERVNF
        MVKSENEAFDSTFPFSSNKVKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERVNF
Subjt:  MVKSENEAFDSTFPFSSNKVKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERVNF

TYK20117.1 transcription factor bHLH74-like [Cucumis melo var. makuwa]3.92e-3379.79Show/hide
Query:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        K      DSTFPF+SNK     +K DVSGDSSSTQEEKNAE EQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AERV
Subjt:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

XP_004141299.3 transcription factor bHLH74 [Cucumis sativus]1.02e-3380.85Show/hide
Query:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        K      DSTFPFSSNK     +K DVSGDSSSTQEEKNAEMEQ LGGNSRGKST KQTKEKS+NSAEAPKE+YIHVRARRGQATNSHS+AERV
Subjt:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

XP_008452681.1 PREDICTED: transcription factor bHLH74-like [Cucumis melo]5.20e-3480.85Show/hide
Query:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        K      DSTFPF+SNK     +K DVSGDSSSTQEEKNAEMEQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AERV
Subjt:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

XP_038896915.1 transcription factor bHLH74 [Benincasa hispida]2.07e-3278.72Show/hide
Query:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        K    A DST PFS NK     +K DVSGDSSSTQEEKN EMEQ LGGNSRGK+T KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AERV
Subjt:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

TrEMBL top hitse value%identityAlignment
A0A0A0L0K5 BHLH domain-containing protein9.68e-3479.79Show/hide
Query:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        K      DSTFPFSSNK     +K DVSGDSSSTQEEKNAEMEQ +GGNSRGKST KQTKEKS+NSAEAPKE+YIHVRARRGQATNSHS+AERV
Subjt:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

A0A0A0LTU3 BHLH domain-containing protein1.50e-4894.79Show/hide
Query:  MVKSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        MVKSENEAFDSTFPFSSNK     VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
Subjt:  MVKSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

A0A1S3BV77 transcription factor bHLH74-like2.52e-3480.85Show/hide
Query:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        K      DSTFPF+SNK     +K DVSGDSSSTQEEKNAEMEQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AERV
Subjt:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

A0A5A7VFJ6 Transcription factor bHLH74-like2.52e-3480.85Show/hide
Query:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        K      DSTFPF+SNK     +K DVSGDSSSTQEEKNAEMEQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AERV
Subjt:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

A0A5D3D971 Transcription factor bHLH74-like1.90e-3379.79Show/hide
Query:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        K      DSTFPF+SNK     +K DVSGDSSSTQEEKNAE EQ LGGNSRGKST KQTKEKSNNSAEAPKE+YIHVRARRGQATNSHS+AERV
Subjt:  KSENEAFDSTFPFSSNK-----VKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

SwissProt top hitse value%identityAlignment
Q0JXE7 Transcription factor BPE3.1e-0441.79Show/hide
Query:  VSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER
        VS   +S  E K  +++++  G +  +S   +T++K       P + YIHVRARRGQAT+SHS+AER
Subjt:  VSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAER

Q6NKN9 Transcription factor bHLH741.1e-0663.27Show/hide
Query:  SRGKSTRKQTKE----KSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        S+ K    Q+KE    +S+ S EAPKE+YIH+RARRGQATNSHS+AERV
Subjt:  SRGKSTRKQTKE----KSNNSAEAPKESYIHVRARRGQATNSHSVAERV

Q8GY61 Transcription factor bHLH631.1e-0445.59Show/hide
Query:  QEEKNAEMEQILGGNSRGKSTRKQTKEKSNN--------SAEAPKESYIHVRARRGQATNSHSVAERV
        +EEK+   EQ  G     K  + + K++ NN        + E  K  YIHVRARRGQAT+SHS+AERV
Subjt:  QEEKNAEMEQILGGNSRGKSTRKQTKEKSNN--------SAEAPKESYIHVRARRGQATNSHSVAERV

Q93W88 Transcription factor bHLH1375.2e-0443.94Show/hide
Query:  GDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        G S+ T   K    +     NS+     +++K++   S E P   YIHVRARRGQAT+SHS+AERV
Subjt:  GDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

Q9CAA9 Transcription factor bHLH491.1e-0439.33Show/hide
Query:  SSNKVKNDVSG--DSSSTQEEKNAEMEQILGGNSRGKSTRKQT-----------KEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        SSN  K   +G  +S + Q  ++ + E+    N   K   +Q+           K++   S++ PK+ YIHVRARRGQATNSHS+AERV
Subjt:  SSNKVKNDVSG--DSSSTQEEKNAEMEQILGGNSRGKSTRKQT-----------KEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

Arabidopsis top hitse value%identityAlignment
AT1G10120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.0e-0863.27Show/hide
Query:  SRGKSTRKQTKE----KSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        S+ K    Q+KE    +S+ S EAPKE+YIH+RARRGQATNSHS+AERV
Subjt:  SRGKSTRKQTKE----KSNNSAEAPKESYIHVRARRGQATNSHSVAERV

AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.5e-0639.33Show/hide
Query:  SSNKVKNDVSG--DSSSTQEEKNAEMEQILGGNSRGKSTRKQT-----------KEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        SSN  K   +G  +S + Q  ++ + E+    N   K   +Q+           K++   S++ PK+ YIHVRARRGQATNSHS+AERV
Subjt:  SSNKVKNDVSG--DSSSTQEEKNAEMEQILGGNSRGKSTRKQT-----------KEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

AT1G68920.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.5e-0639.33Show/hide
Query:  SSNKVKNDVSG--DSSSTQEEKNAEMEQILGGNSRGKSTRKQT-----------KEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        SSN  K   +G  +S + Q  ++ + E+    N   K   +Q+           K++   S++ PK+ YIHVRARRGQATNSHS+AERV
Subjt:  SSNKVKNDVSG--DSSSTQEEKNAEMEQILGGNSRGKSTRKQT-----------KEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

AT1G68920.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.7e-0639.77Show/hide
Query:  SSNKVKNDVSG-DSSSTQEEKNAEMEQILGGNSRGKSTRKQT-----------KEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV
        SSN  K   +G +S + Q  ++ + E+    N   K   +Q+           K++   S++ PK+ YIHVRARRGQATNSHS+AERV
Subjt:  SSNKVKNDVSG-DSSSTQEEKNAEMEQILGGNSRGKSTRKQT-----------KEKSNNSAEAPKESYIHVRARRGQATNSHSVAERV

AT4G34530.1 cryptochrome-interacting basic-helix-loop-helix 17.5e-0645.59Show/hide
Query:  QEEKNAEMEQILGGNSRGKSTRKQTKEKSNN--------SAEAPKESYIHVRARRGQATNSHSVAERV
        +EEK+   EQ  G     K  + + K++ NN        + E  K  YIHVRARRGQAT+SHS+AERV
Subjt:  QEEKNAEMEQILGGNSRGKSTRKQTKEKSNN--------SAEAPKESYIHVRARRGQATNSHSVAERV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAAATCAGAAAACGAAGCCTTTGATTCAACTTTTCCATTTAGCTCAAATAAGGTGAAGAATGATGTTTCTGGGGATAGTTCCAGTACACAAGAAGAGAAA
AATGCAGAAATGGAGCAAATTTTAGGTGGGAATTCACGTGGAAAATCAACTAGAAAACAAACTAAAGAGAAATCTAATAATAGTGCTGAGGCTCCTAAGGAAAGT
TATATTCATGTGAGAGCTAGAAGAGGGCAAGCCACAAATAGCCATAGCGTCGCTGAGAGGGTAAATTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAAATCAGAAAACGAAGCCTTTGATTCAACTTTTCCATTTAGCTCAAATAAGGTGAAGAATGATGTTTCTGGGGATAGTTCCAGTACACAAGAAGAGAAA
AATGCAGAAATGGAGCAAATTTTAGGTGGGAATTCACGTGGAAAATCAACTAGAAAACAAACTAAAGAGAAATCTAATAATAGTGCTGAGGCTCCTAAGGAAAGT
TATATTCATGTGAGAGCTAGAAGAGGGCAAGCCACAAATAGCCATAGCGTCGCTGAGAGGGTAAATTTCTAG
Protein sequenceShow/hide protein sequence
MVKSENEAFDSTFPFSSNKVKNDVSGDSSSTQEEKNAEMEQILGGNSRGKSTRKQTKEKSNNSAEAPKESYIHVRARRGQATNSHSVAERVNF