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CsGy1G020020 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G020020
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptiongolgin candidate 5
Genome locationGy14Chr1:18778874..18779287
RNA-Seq ExpressionCsGy1G020020
SyntenyCsGy1G020020
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045520.1 golgin candidate 5 [Cucumis melo var. makuwa]1.98e-3098.65Show/hide
Query:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        +SRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
Subjt:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
PNX57139.1 golgin candidate 5-like protein, partial [Trifolium pratense]6.85e-3291.89Show/hide
Query:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        +SRLQEAEAKAA AEERERS+N+RLSQTLSRINVLEAQ+SCLRAEQTQLSKTLEKERQRAAE RQEYLAAKEEA
Subjt:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
XP_004151124.1 golgin candidate 5 [Cucumis sativus]1.97e-3098.65Show/hide
Query:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        +SRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
Subjt:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
XP_008460929.1 PREDICTED: golgin candidate 5 [Cucumis melo]1.97e-3098.65Show/hide
Query:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        +SRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
Subjt:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
XP_038901055.1 golgin candidate 5 [Benincasa hispida]1.44e-3096.1Show/hide
Query:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        R  +SRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
Subjt:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
TrEMBL top hitse value%identityAlignment
A0A0A0LQ56 TMF_TATA_bd domain-containing protein9.54e-3198.65Show/hide
Query:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        +SRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
Subjt:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
A0A0A0LZR9 Uncharacterized protein1.62e-43100Show/hide
Query:  MRLRIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEAKQFKV
        MRLRIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEAKQFKV
Subjt:  MRLRIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEAKQFKV
A0A1S3CE12 golgin candidate 59.54e-3198.65Show/hide
Query:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        +SRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
Subjt:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
A0A2K3JSX1 Golgin candidate 5-like protein (Fragment)3.32e-3291.89Show/hide
Query:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        +SRLQEAEAKAA AEERERS+N+RLSQTLSRINVLEAQ+SCLRAEQTQLSKTLEKERQRAAE RQEYLAAKEEA
Subjt:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
A0A5D3BVJ8 Golgin candidate 59.58e-3198.65Show/hide
Query:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        +SRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
Subjt:  HSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
SwissProt top hitse value%identityAlignment
Q0WVL7 Golgin candidate 58.4e-2587.01Show/hide
Query:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        R  +SRLQEAE+KAA AEERERS+NERLSQTLSRINVLEAQ+SCLRAEQ QLSK+LEKERQRAAE RQEYLAAKEEA
Subjt:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
Arabidopsis top hitse value%identityAlignment
AT1G79830.1 golgin candidate 56.0e-2687.01Show/hide
Query:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        R  +SRLQEAE+KAA AEERERS+NERLSQTLSRINVLEAQ+SCLRAEQ QLSK+LEKERQRAAE RQEYLAAKEEA
Subjt:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
AT1G79830.2 golgin candidate 56.0e-2687.01Show/hide
Query:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        R  +SRLQEAE+KAA AEERERS+NERLSQTLSRINVLEAQ+SCLRAEQ QLSK+LEKERQRAAE RQEYLAAKEEA
Subjt:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
AT1G79830.3 golgin candidate 56.0e-2687.01Show/hide
Query:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        R  +SRLQEAE+KAA AEERERS+NERLSQTLSRINVLEAQ+SCLRAEQ QLSK+LEKERQRAAE RQEYLAAKEEA
Subjt:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
AT1G79830.4 golgin candidate 56.0e-2687.01Show/hide
Query:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA
        R  +SRLQEAE+KAA AEERERS+NERLSQTLSRINVLEAQ+SCLRAEQ QLSK+LEKERQRAAE RQEYLAAKEEA
Subjt:  RIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCTACGTATCCAACACTCTAGGCTTCAGGAAGCAGAAGCGAAAGCTGCTGCTGCTGAAGAAAGAGAGCGATCTATAAATGAACGCTTGTCCCAAACCTTATCTAG
AATTAATGTTCTGGAGGCGCAGGTTTCATGCCTTAGAGCAGAGCAGACTCAATTAAGCAAAACCCTTGAGAAGGAGAGGCAGAGAGCAGCTGAAATCAGGCAGGAGTATC
TGGCAGCAAAAGAGGAAGCTAAGCAATTTAAAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCTACGTATCCAACACTCTAGGCTTCAGGAAGCAGAAGCGAAAGCTGCTGCTGCTGAAGAAAGAGAGCGATCTATAAATGAACGCTTGTCCCAAACCTTATCTAG
AATTAATGTTCTGGAGGCGCAGGTTTCATGCCTTAGAGCAGAGCAGACTCAATTAAGCAAAACCCTTGAGAAGGAGAGGCAGAGAGCAGCTGAAATCAGGCAGGAGTATC
TGGCAGCAAAAGAGGAAGCTAAGCAATTTAAAGTATGA
Protein sequenceShow/hide protein sequence
MRLRIQHSRLQEAEAKAAAAEERERSINERLSQTLSRINVLEAQVSCLRAEQTQLSKTLEKERQRAAEIRQEYLAAKEEAKQFKV