CuGenDBv2

Gene ID	CsGy1G021110
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	prefoldin subunit 6
Genome location	Gy14Chr1:19817373..19836066
RNA-Seq Expression	CsGy1G021110
Synteny	CsGy1G021110
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0043622 - cortical microtubule organization (biological process) GO:0051131 - chaperone-mediated protein complex assembly (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016272 - prefoldin complex (cellular component) GO:0051082 - unfolded protein binding (molecular function) GO:0051087 - chaperone binding (molecular function)
InterPro domains	IPR002777 - Prefoldin beta-like IPR009053 - Prefoldin

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004147411.1 prefoldin subunit 6 [Cucumis sativus]

1.04e-76

100

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

XP_008444032.1 PREDICTED: prefoldin subunit 6 [Cucumis melo]

7.86e-72

93.08

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSS++ALRE+QRELEAKANDLSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDS LQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        DLEEKQN  RD +LKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

XP_022140149.1 prefoldin subunit 6-like [Momordica charantia]

3.74e-70

91.54

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSS++ALRE+QRELEAKAN+LSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAELKRLDS LQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        DLEEKQN KRD +LKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

XP_022954700.1 prefoldin subunit 6-like [Cucurbita moschata]

6.19e-69

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSS+T LRE+QRELE+KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL+DD NV+KLIGPVLVKQDLAEANANVRKRI+YISAELKRLDS LQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        DLEEKQN KRD +LKLQQR QSLQAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

XP_038895368.1 prefoldin subunit 6 [Benincasa hispida]

1.30e-70

92.31

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSS++ALRE+QRELE KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL DD NVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDS LQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        DLEEKQN KRD +LKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9I1 prefoldin subunit 6

3.81e-72

93.08

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSS++ALRE+QRELEAKANDLSKLQKDIAKNHQVRKKYT+QLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDS LQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        DLEEKQN  RD +LKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

A0A6J1CEX4 prefoldin subunit 6-like

1.81e-70

91.54

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSS++ALRE+QRELEAKAN+LSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAELKRLDS LQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        DLEEKQN KRD +LKLQQRIQSLQAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

A0A6J1GT51 prefoldin subunit 6-like

3.00e-69

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSS+T LRE+QRELE+KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL+DD NV+KLIGPVLVKQDLAEANANVRKRI+YISAELKRLDS LQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        DLEEKQN KRD +LKLQQR QSLQAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

A0A6J1K0L9 prefoldin subunit 6-like

1.22e-68

89.23

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSS++ LRE+QRELE+KANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLL+DD NV+KLIGPVLVKQDLAEANANVRKRI+YISAELKRLDS LQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        DLEEKQN KRD +LKLQQR QSLQAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

A0A6J1KLC2 prefoldin subunit 6-like

1.22e-68

89.15

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSS++A+RE+QRELE KANDLSKLQKDIAKNHQ+RKKYTIQLGENELVLKEL+LL+DD NVYKLIGPVLVKQDLAEANANVRKRI+YISAELKRLDS LQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAK
        DLEEKQN KRD +LKLQQRIQSLQAGKAK
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAK

SwissProt top hits

e value

%identity

Alignment

O15212 Prefoldin subunit 6

5.0e-21

46.28

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Query:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRK
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR +S L+DLE +  ++
Subjt:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRK

Query:  RDVVLKLQQRIQSLQAGKAKA
        R+ + +LQQ  Q  QA KA A
Subjt:  RDVVLKLQQRIQSLQAGKAKA

P52554 Probable prefoldin subunit 6

8.3e-16

39.83

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Query:  ELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRKRDV
        + E + N L  L+KD  K    R++  ++L E++ V  ELDL++ D+ VYKLIG VLV+QDL EA + V KR+E+I +E KR+++ + D+ +K   +RD 
Subjt:  ELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRKRDV

Query:  VLKLQQRIQSLQAGKAKA
        V+ +Q+  Q +    A+A
Subjt:  VLKLQQRIQSLQAGKAKA

Q03958 Prefoldin subunit 6

8.6e-21

46.22

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Query:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRK
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR +S L+DLE +  ++
Subjt:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRK

Query:  RDVVLKLQQRIQSLQAGKA
        R+ + +LQQ  Q  QA KA
Subjt:  RDVVLKLQQRIQSLQAGKA

Q17Q89 Prefoldin subunit 6

3.0e-21

46.28

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Query:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRK
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR +S L+DLE++  ++
Subjt:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRK

Query:  RDVVLKLQQRIQSLQAGKAKA
        R+ + +LQQ  Q  QA KA A
Subjt:  RDVVLKLQQRIQSLQAGKAKA

Q5TJE6 Prefoldin subunit 6

5.0e-21

46.28

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Query:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRK
        +Q++L+ +     +LQKD++K+   R+K   QL EN +V +EL LL     V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR +S L+DLE +  ++
Subjt:  VQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEKQNRK

Query:  RDVVLKLQQRIQSLQAGKAKA
        R+ + +LQQ  Q  QA KA A
Subjt:  RDVVLKLQQRIQSLQAGKAKA

Arabidopsis top hits

e value

%identity

Alignment

AT1G29990.1 prefoldin 6

1.5e-52

82.31

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Query:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ
        MSSST +R++QR+LE KANDL K+QKDI KNHQ+RKKYTIQLGENELVLKELDLL++D NVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLD+ILQ
Subjt:  MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQ

Query:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA
        D+EEKQN KR+ ++KLQQR+Q++QAGKAKA
Subjt:  DLEEKQNRKRDVVLKLQQRIQSLQAGKAKA

Sequences

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CDS sequence

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ATGAGTTCTTCAACCGCTCTTCGAGAGGTACAGCGCGAGTTGGAGGCGAAAGCCAACGATCTCAGCAAGCTACAGAAAGATATTGCGAAGAATCACCAAGTGAGG
AAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTTCTTAAGGAATTGGATTTACTTCAAGACGACACAAATGTATATAAACTGATTGGTCCAGTGCTCGTG
AAGCAAGATTTGGCAGAAGCAAATGCGAATGTGCGCAAGAGAATTGAATACATCTCCGCAGAATTGAAACGTCTTGATTCAATTCTTCAAGATTTGGAAGAGAAG
CAAAATCGCAAGAGAGATGTGGTATTGAAGTTACAACAGAGGATACAGTCTCTGCAGGCTGGAAAAGCTAAAGCATAA

mRNA sequence

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Protein sequence

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MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDSILQDLEEK
QNRKRDVVLKLQQRIQSLQAGKAKA

CsGy1G021110 (gene) of Cucumber (Gy14) v2.1 genome