; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy1G021630 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G021630
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPentatricopeptide repeat-containing protein DOT4
Genome locationGy14Chr1:20336537..20337606
RNA-Seq ExpressionCsGy1G021630
SyntenyCsGy1G021630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057054.1 pentatricopeptide repeat-containing protein DOT4 [Cucumis melo var. makuwa]2.49e-20292.43Show/hide
Query:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
        MMLL AKAP+TFWLSPAG+DHRGSVNLKFRQSFLF  P+SKLSFSSLAYAPA+ETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDL A+CS
Subjt:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS

Query:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
        ILQLCAERKSIRDGRRV SIIESSGV+IDGILGVKLVFMYVKCGDLKEGRM+FDKLSESK+F+WNLMISEY G+GNYGESINLFKQMLELGIKPNSYTFS
Subjt:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS

Query:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
        S+LKCFAAVA VEEGRQVHGLI KLG+NSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV+IDLATM
Subjt:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM

Query:  VNVFVACANIGTLLLGK
        VNV VACAN GTLL GK
Subjt:  VNVFVACANIGTLLLGK

KGN65968.2 hypothetical protein Csa_019583 [Cucumis sativus]2.48e-231100Show/hide
Query:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
        MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
Subjt:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS

Query:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
        ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
Subjt:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS

Query:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
        SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
Subjt:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM

Query:  VNVFVACANIGTLLLGKCHPGF
        VNVFVACANIGTLLLGKCHPGF
Subjt:  VNVFVACANIGTLLLGKCHPGF

XP_008443463.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucumis melo]2.49e-20292.43Show/hide
Query:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
        MMLL AKAP+TFWLSPAG+DHRGSVNLKFRQSFLF  P+SKLSFSSLAYAPA+ETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDL A+CS
Subjt:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS

Query:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
        ILQLCAERKSIRDGRRV SIIESSGV+IDGILGVKLVFMYVKCGDLKEGRM+FDKLSESK+F+WNLMISEY G+GNYGESINLFKQMLELGIKPNSYTFS
Subjt:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS

Query:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
        S+LKCFAAVA VEEGRQVHGLI KLG+NSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV+IDLATM
Subjt:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM

Query:  VNVFVACANIGTLLLGK
        VNV VACAN GTLL GK
Subjt:  VNVFVACANIGTLLLGK

XP_011657608.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucumis sativus]2.72e-217100Show/hide
Query:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
        MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
Subjt:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS

Query:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
        ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
Subjt:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS

Query:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
        SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
Subjt:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM

Query:  VNVFVACANIGTLLLGK
        VNVFVACANIGTLLLGK
Subjt:  VNVFVACANIGTLLLGK

XP_038893908.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic [Benincasa hispida]1.55e-18384.26Show/hide
Query:  MLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLA------YAPALETK--SYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNF
        MLL AK P TFWLSP G DHRG ++LKFRQSF+FV P+SK SFS+ A      Y PALETK  SY+DVELD+S KIVEFCE+GDLKNAMELLC SQNS F
Subjt:  MLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLA------YAPALETK--SYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNF

Query:  DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIK
        DL  YCSILQLCAE+KSIRDGRRV SIIES+GVMIDGILGVKLVFMYVKCGDLKEGR++FDKLSE+K+FLWNLMISEYSG+GNYGESINLFKQMLELGIK
Subjt:  DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIK

Query:  PNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV
        PNSYTFSS+LKC AAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFV RKVR AQKLFDELTDRDVISWNSMISGYVKNGL+D+GIEIFIKML F +
Subjt:  PNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV

Query:  DIDLATMVNVFVACANIGTLLLGK
        D DLATMVNV VACAN+GTLLLGK
Subjt:  DIDLATMVNVFVACANIGTLLLGK

TrEMBL top hitse value%identityAlignment
A0A0A0LV30 DYW_deaminase domain-containing protein1.32e-217100Show/hide
Query:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
        MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
Subjt:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS

Query:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
        ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
Subjt:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS

Query:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
        SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
Subjt:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM

Query:  VNVFVACANIGTLLLGK
        VNVFVACANIGTLLLGK
Subjt:  VNVFVACANIGTLLLGK

A0A1S3B857 pentatricopeptide repeat-containing protein DOT4, chloroplastic1.20e-20292.43Show/hide
Query:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
        MMLL AKAP+TFWLSPAG+DHRGSVNLKFRQSFLF  P+SKLSFSSLAYAPA+ETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDL A+CS
Subjt:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS

Query:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
        ILQLCAERKSIRDGRRV SIIESSGV+IDGILGVKLVFMYVKCGDLKEGRM+FDKLSESK+F+WNLMISEY G+GNYGESINLFKQMLELGIKPNSYTFS
Subjt:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS

Query:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
        S+LKCFAAVA VEEGRQVHGLI KLG+NSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV+IDLATM
Subjt:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM

Query:  VNVFVACANIGTLLLGK
        VNV VACAN GTLL GK
Subjt:  VNVFVACANIGTLLLGK

A0A5A7UPC9 Pentatricopeptide repeat-containing protein DOT41.20e-20292.43Show/hide
Query:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS
        MMLL AKAP+TFWLSPAG+DHRGSVNLKFRQSFLF  P+SKLSFSSLAYAPA+ETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDL A+CS
Subjt:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS

Query:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS
        ILQLCAERKSIRDGRRV SIIESSGV+IDGILGVKLVFMYVKCGDLKEGRM+FDKLSESK+F+WNLMISEY G+GNYGESINLFKQMLELGIKPNSYTFS
Subjt:  ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFS

Query:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
        S+LKCFAAVA VEEGRQVHGLI KLG+NSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV+IDLATM
Subjt:  SILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM

Query:  VNVFVACANIGTLLLGK
        VNV VACAN GTLL GK
Subjt:  VNVFVACANIGTLLLGK

A0A6J1EHU9 pentatricopeptide repeat-containing protein DOT4, chloroplastic1.04e-17580.86Show/hide
Query:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAP-------ALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNF
        M LL AKAP TFWLS AG DHRG VNLKFRQS  FV P+S+ SFS+ A+A        ALE K+Y+DVEL++SRKIV+FCEVGDLKNA+ELLCSSQNSN 
Subjt:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAP-------ALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNF

Query:  DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIK
        DL  YC ILQLCAE+KSIRDGRRV SIIES+ V+IDGILG KLVFMYVKCGDL+EGRM+FDKLSE K+FLWNLMISEYSGSGNYGESINLFK+MLELGI 
Subjt:  DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIK

Query:  PNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV
        PNSYTFSS+LKCFAAVARVEEG QVHGLICKLGF SYN VVNSLISFYFVGRKVR A+KLFDE++DRDVISWNSMISGYVKNGL+DRGIEIF++MLVF V
Subjt:  PNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV

Query:  DIDLATMVNVFVACANIGTLLLGK
        D+DLATMVNV VACAN+GTL LGK
Subjt:  DIDLATMVNVFVACANIGTLLLGK

A0A6J1KNK7 pentatricopeptide repeat-containing protein DOT4, chloroplastic3.69e-17680.86Show/hide
Query:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAP-------ALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNF
        M LL AKAP TFWLS AG DHRG VNLKFRQS  FV P+S+ SFS+ AYA        ALE K+Y+D EL++SRKIV+FCEVGDLKNA+ELLCSSQNSN 
Subjt:  MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAP-------ALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNF

Query:  DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIK
        DL  YC ILQLCAE+KSIRDGRRV SIIES+ V+IDGILG KLVFMYVKCGDL+EGRM+FDKLSE K+FLWNLMISEYSGSGNYGESINLFK+MLELGI 
Subjt:  DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIK

Query:  PNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV
        PNSYTFSS+LKCFAAV RVEEGRQVHGLICKLGF SYN VVNSLISFYFVGRKVR A+KLFDE++DRDVISWNSMISGYVKNGL+DRGIEIF++MLVF V
Subjt:  PNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV

Query:  DIDLATMVNVFVACANIGTLLLGK
        D+DLATMVNV VACAN+GTL LGK
Subjt:  DIDLATMVNVFVACANIGTLLLGK

SwissProt top hitse value%identityAlignment
Q3E6Q1 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic7.0e-3229.84Show/hide
Query:  FCEVGDLKNAMELLCSSQNSNFDLGAY--CSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMIS
        F +V DL  A++     +  + +   Y    +L++C +   +R G+ +  ++  SG  +D      L  MY KC  + E R VFD++ E  +  WN +++
Subjt:  FCEVGDLKNAMELLCSSQNSNFDLGAY--CSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMIS

Query:  EYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMI
         YS +G    ++ + K M E  +KP+  T  S+L   +A+  +  G+++HG   + GF+S   +  +L+  Y     +  A++LFD + +R+V+SWNSMI
Subjt:  EYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMI

Query:  SGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK
          YV+N      + IF KML  GV     +++    ACA++G L  G+
Subjt:  SGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK

Q9LIC3 Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial3.2e-3229.53Show/hide
Query:  IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMI
        I + C  G L+ A+ L  +          Y ++L  C +++++RDG+RV + +  +  +    L  +L+  Y KC  L++ R V D++ E  +  W  MI
Subjt:  IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMI

Query:  SEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSM
        S YS +G+  E++ +F +M+    KPN +TF+++L      + +  G+Q+HGLI K  ++S+  V +SL+  Y    +++ A+++F+ L +RDV+S  ++
Subjt:  SEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSM

Query:  ISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK---CH
        I+GY + GLD+  +E+F ++   G+  +  T  ++  A + +  L  GK   CH
Subjt:  ISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK---CH

Q9M9E2 Pentatricopeptide repeat-containing protein At1g15510, chloroplastic3.8e-3834.77Show/hide
Query:  SSRKIVEFCEVGDLKNAMELLCSSQNSN--FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIF
        S+ ++   C  G L+ AM+LL S Q      D   + ++++LC  +++  +G +V SI  SS   +   LG   + M+V+ G+L +   VF K+SE  +F
Subjt:  SSRKIVEFCEVGDLKNAMELLCSSQNSN--FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIF

Query:  LWNLMISEYSGSGNYGESINLFKQMLEL-GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRD
         WN+++  Y+  G + E++ L+ +ML + G+KP+ YTF  +L+    +  +  G++VH  + + G+     VVN+LI+ Y     V+ A+ LFD +  RD
Subjt:  LWNLMISEYSGSGNYGESINLFKQMLEL-GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRD

Query:  VISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK
        +ISWN+MISGY +NG+   G+E+F  M    VD DL T+ +V  AC  +G   LG+
Subjt:  VISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK

Q9SN39 Pentatricopeptide repeat-containing protein DOT4, chloroplastic7.9e-6847.24Show/hide
Query:  DSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFL
        D++ ++  FCE G+L+NA++LLC S   + D    CS+LQLCA+ KS++DG+ V + I  +G +ID  LG KL  MY  CGDLKE   VFD++   K   
Subjt:  DSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFL

Query:  WNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVI
        WN++++E + SG++  SI LFK+M+  G++ +SYTFS + K F+++  V  G Q+HG I K GF   N+V NSL++FY   ++V  A+K+FDE+T+RDVI
Subjt:  WNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVI

Query:  SWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK
        SWNS+I+GYV NGL ++G+ +F++MLV G++IDLAT+V+VF  CA+   + LG+
Subjt:  SWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK

Q9ZQ74 Pentatricopeptide repeat-containing protein At2g03380, mitochondrial1.6e-3132.42Show/hide
Query:  YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSY
        Y +++  C +  ++  G+     +  SG+ +   L   L+ MYVKCGD+   R VF++ S   + +W  MI  Y+ +G+  E+++LF++M  + IKPN  
Subjt:  YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSY

Query:  TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDL
        T +S+L     +  +E GR VHGL  K+G    N V N+L+  Y    + R A+ +F+  +++D+++WNS+ISG+ +NG     + +F +M    V  + 
Subjt:  TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDL

Query:  ATMVNVFVACANIGTLLLG
         T+ ++F ACA++G+L +G
Subjt:  ATMVNVFVACANIGTLLLG

Arabidopsis top hitse value%identityAlignment
AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein5.0e-3329.84Show/hide
Query:  FCEVGDLKNAMELLCSSQNSNFDLGAY--CSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMIS
        F +V DL  A++     +  + +   Y    +L++C +   +R G+ +  ++  SG  +D      L  MY KC  + E R VFD++ E  +  WN +++
Subjt:  FCEVGDLKNAMELLCSSQNSNFDLGAY--CSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMIS

Query:  EYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMI
         YS +G    ++ + K M E  +KP+  T  S+L   +A+  +  G+++HG   + GF+S   +  +L+  Y     +  A++LFD + +R+V+SWNSMI
Subjt:  EYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMI

Query:  SGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK
          YV+N      + IF KML  GV     +++    ACA++G L  G+
Subjt:  SGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK

AT1G15510.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.7e-3934.77Show/hide
Query:  SSRKIVEFCEVGDLKNAMELLCSSQNSN--FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIF
        S+ ++   C  G L+ AM+LL S Q      D   + ++++LC  +++  +G +V SI  SS   +   LG   + M+V+ G+L +   VF K+SE  +F
Subjt:  SSRKIVEFCEVGDLKNAMELLCSSQNSN--FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIF

Query:  LWNLMISEYSGSGNYGESINLFKQMLEL-GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRD
         WN+++  Y+  G + E++ L+ +ML + G+KP+ YTF  +L+    +  +  G++VH  + + G+     VVN+LI+ Y     V+ A+ LFD +  RD
Subjt:  LWNLMISEYSGSGNYGESINLFKQMLEL-GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRD

Query:  VISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK
        +ISWN+MISGY +NG+   G+E+F  M    VD DL T+ +V  AC  +G   LG+
Subjt:  VISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK

AT2G03380.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-3232.42Show/hide
Query:  YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSY
        Y +++  C +  ++  G+     +  SG+ +   L   L+ MYVKCGD+   R VF++ S   + +W  MI  Y+ +G+  E+++LF++M  + IKPN  
Subjt:  YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSY

Query:  TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDL
        T +S+L     +  +E GR VHGL  K+G    N V N+L+  Y    + R A+ +F+  +++D+++WNS+ISG+ +NG     + +F +M    V  + 
Subjt:  TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDL

Query:  ATMVNVFVACANIGTLLLG
         T+ ++F ACA++G+L +G
Subjt:  ATMVNVFVACANIGTLLLG

AT3G13770.1 Pentatricopeptide repeat (PPR) superfamily protein2.2e-3329.53Show/hide
Query:  IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMI
        I + C  G L+ A+ L  +          Y ++L  C +++++RDG+RV + +  +  +    L  +L+  Y KC  L++ R V D++ E  +  W  MI
Subjt:  IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMI

Query:  SEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSM
        S YS +G+  E++ +F +M+    KPN +TF+++L      + +  G+Q+HGLI K  ++S+  V +SL+  Y    +++ A+++F+ L +RDV+S  ++
Subjt:  SEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSM

Query:  ISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK---CH
        I+GY + GLD+  +E+F ++   G+  +  T  ++  A + +  L  GK   CH
Subjt:  ISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK---CH

AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein5.6e-6947.24Show/hide
Query:  DSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFL
        D++ ++  FCE G+L+NA++LLC S   + D    CS+LQLCA+ KS++DG+ V + I  +G +ID  LG KL  MY  CGDLKE   VFD++   K   
Subjt:  DSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFL

Query:  WNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVI
        WN++++E + SG++  SI LFK+M+  G++ +SYTFS + K F+++  V  G Q+HG I K GF   N+V NSL++FY   ++V  A+K+FDE+T+RDVI
Subjt:  WNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVI

Query:  SWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK
        SWNS+I+GYV NGL ++G+ +F++MLV G++IDLAT+V+VF  CA+   + LG+
Subjt:  SWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTACTGGCAGCAAAAGCCCCTATAACCTTTTGGCTATCTCCGGCCGGGAACGATCATCGTGGCTCCGTGAACTTGAAATTCCGGCAATCTTTTCTTTTTGTCAT
ACCCAGTTCGAAACTTTCCTTTTCAAGTTTGGCTTATGCCCCAGCATTGGAAACGAAAAGCTATATGGATGTTGAACTGGATAGTTCCCGCAAAATTGTCGAGTTTTGTG
AAGTGGGGGATCTCAAAAACGCCATGGAGCTTCTTTGCAGTTCCCAAAATTCCAACTTTGACTTGGGTGCTTATTGCTCCATCTTGCAGCTATGTGCTGAACGAAAATCT
ATACGAGATGGAAGAAGGGTTCGTTCAATAATAGAATCTAGTGGGGTTATGATAGATGGAATCTTGGGGGTGAAACTAGTTTTTATGTATGTTAAATGTGGGGATCTAAA
AGAAGGGAGGATGGTTTTTGATAAACTTTCTGAAAGTAAGATTTTTCTCTGGAACCTTATGATCAGTGAGTATTCAGGAAGTGGTAACTATGGAGAGAGTATAAATTTGT
TCAAGCAAATGCTGGAGTTGGGAATAAAACCTAATTCATATACATTTTCTAGTATTTTGAAGTGTTTCGCAGCAGTTGCACGTGTAGAAGAGGGTAGGCAGGTTCATGGG
TTGATCTGTAAATTGGGTTTTAATTCTTATAACACAGTCGTTAATTCATTAATTTCTTTCTACTTTGTTGGTAGAAAGGTTAGATGTGCACAGAAGCTGTTCGATGAATT
GACTGACCGAGATGTCATTTCATGGAACTCTATGATCAGTGGCTATGTTAAGAATGGTTTAGATGACAGAGGAATTGAGATTTTCATAAAGATGTTGGTTTTCGGTGTTG
ATATTGATTTGGCTACAATGGTTAATGTGTTTGTAGCTTGTGCAAATATAGGCACTCTTTTGTTGGGTAAGTGCCATCCGGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTTACTGGCAGCAAAAGCCCCTATAACCTTTTGGCTATCTCCGGCCGGGAACGATCATCGTGGCTCCGTGAACTTGAAATTCCGGCAATCTTTTCTTTTTGTCAT
ACCCAGTTCGAAACTTTCCTTTTCAAGTTTGGCTTATGCCCCAGCATTGGAAACGAAAAGCTATATGGATGTTGAACTGGATAGTTCCCGCAAAATTGTCGAGTTTTGTG
AAGTGGGGGATCTCAAAAACGCCATGGAGCTTCTTTGCAGTTCCCAAAATTCCAACTTTGACTTGGGTGCTTATTGCTCCATCTTGCAGCTATGTGCTGAACGAAAATCT
ATACGAGATGGAAGAAGGGTTCGTTCAATAATAGAATCTAGTGGGGTTATGATAGATGGAATCTTGGGGGTGAAACTAGTTTTTATGTATGTTAAATGTGGGGATCTAAA
AGAAGGGAGGATGGTTTTTGATAAACTTTCTGAAAGTAAGATTTTTCTCTGGAACCTTATGATCAGTGAGTATTCAGGAAGTGGTAACTATGGAGAGAGTATAAATTTGT
TCAAGCAAATGCTGGAGTTGGGAATAAAACCTAATTCATATACATTTTCTAGTATTTTGAAGTGTTTCGCAGCAGTTGCACGTGTAGAAGAGGGTAGGCAGGTTCATGGG
TTGATCTGTAAATTGGGTTTTAATTCTTATAACACAGTCGTTAATTCATTAATTTCTTTCTACTTTGTTGGTAGAAAGGTTAGATGTGCACAGAAGCTGTTCGATGAATT
GACTGACCGAGATGTCATTTCATGGAACTCTATGATCAGTGGCTATGTTAAGAATGGTTTAGATGACAGAGGAATTGAGATTTTCATAAAGATGTTGGTTTTCGGTGTTG
ATATTGATTTGGCTACAATGGTTAATGTGTTTGTAGCTTGTGCAAATATAGGCACTCTTTTGTTGGGTAAGTGCCATCCGGGTTTTTGA
Protein sequenceShow/hide protein sequence
MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKS
IRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG
LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKCHPGF