; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy1G022010 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G022010
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTHO complex subunit 4A
Genome locationGy14Chr1:20790463..20795020
RNA-Seq ExpressionCsGy1G022010
SyntenyCsGy1G022010
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR025715 - Chromatin target of PRMT1 protein, C-terminal
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583468.1 THO complex subunit 4A, partial [Cucurbita argyrosperma subsp. sororia]7.33e-10088.04Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        MFVDHGAAYPS P RASAIETGTKLYVSNLDYGVSNEDIKELFSEVGD+KRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGT
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTPA+PA +N +FGNPNGF RGG  +GRNRGGGRGRGPGRG GRGRGS     S RG GEKLSAEDLDADL+KYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

XP_004149042.2 THO complex subunit 4A isoform X1 [Cucumis sativus]1.81e-11898.92Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSG--RGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSG  RGHGEKLSAEDLDADLDKYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSG--RGHGEKLSAEDLDADLDKYHEEAMQIN

XP_008457549.1 PREDICTED: THO complex subunit 4A [Cucumis melo]1.54e-11195.11Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGD+KRYSINYDKSGRSKGTAEI+FSR ADALAAIKRYNNVQLDGKPMKLEIVGT
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTPAVPAPSNASFGN NGFPRGGRAMGRNRGGGRGRGPGRG   GRG GSGSGSGRG GEKLSAEDLDADLDKYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

XP_022964653.1 THO complex subunit 4B-like [Cucurbita moschata]1.48e-9988.04Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        MFVDHG+AYPS P RASAIETGTKLYVSNLDYGVSNEDIKELFSEVGD+KRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGT
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTPAVPA +N +FGNPNGF RGG  +GRNRGGGRGRGPGRG GRGRGS     S RG GEKLSAEDLDADL+KYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

XP_038895300.1 THO complex subunit 4A-like [Benincasa hispida]1.31e-10791.85Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        MFVDHGAAYPS PPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGD+KRYSINYDKSGRSKGTAEIVFSRQ+DALAAIKRYNNVQLDGKPMKLEIVGT
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTPAVPA SNA FGNPNGFPRGGRA+GRNRGGGRGRGPGRG     G G GSGSGRG GEKLSAEDLDADL+KYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ3 RRM domain-containing protein8.77e-11998.92Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSG--RGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSG  RGHGEKLSAEDLDADLDKYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSG--RGHGEKLSAEDLDADLDKYHEEAMQIN

A0A1S3C5R6 THO complex subunit 4A7.46e-11295.11Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGD+KRYSINYDKSGRSKGTAEI+FSR ADALAAIKRYNNVQLDGKPMKLEIVGT
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTPAVPAPSNASFGN NGFPRGGRAMGRNRGGGRGRGPGRG   GRG GSGSGSGRG GEKLSAEDLDADLDKYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

A0A6J1G9Y5 THO complex subunit 4A-like isoform X21.62e-9884.78Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        +FVDHG AYPSHP RAS IETGTKLYVSNLDYGVSNEDIKELFSEVGD+KRYSINYDKSGRSKGTAE+VFSRQADALAAIKRYNNVQLDGKPMKLEIVG 
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTP +PA SN +FGN +GF RGGRA+GRNRGGGRGRGPGRG       G G G+GRG GEKLSAEDLDADL+KYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

A0A6J1HLI4 THO complex subunit 4B-like7.15e-10088.04Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        MFVDHG+AYPS P RASAIETGTKLYVSNLDYGVSNEDIKELFSEVGD+KRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGT
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTPAVPA +N +FGNPNGF RGG  +GRNRGGGRGRGPGRG GRGRGS     S RG GEKLSAEDLDADL+KYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

A0A6J1I3N4 THO complex subunit 4A-like6.89e-9988.04Show/hide
Query:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT
        MFVDHGAAYPS P RASAIETGTKLYVSNLDYGVSNEDIKELFSEVGD+KRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGK MKLEIVGT
Subjt:  MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGT

Query:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        NIVTPAVPA +N +FGNPNGF RGG  +GRNRGGGRGRGPGRG   GRG GS   S RG GEKLSAEDLDADL+KYHEEAMQIN
Subjt:  NIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

SwissProt top hitse value%identityAlignment
Q3T0I4 THO complex subunit 41.3e-2751.53Show/hide
Query:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFG
        + +ETG KL VSNLD+GVS+ DI+ELF+E G +K+ +++YD+SGRS GTA++ F R+ADAL A+K+YN V LDG+PM +++V + I T   PA S     
Subjt:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFG

Query:  NPNGFPRGGRAMGRNRG-GGRGRGPGRGRG-RGRGSGSGSGSGRGHGEKLSAEDLDADLDKYH
              RGG  M RNRG GG G G G  RG RG   G G G+GR   ++LSAE+LDA LD Y+
Subjt:  NPNGFPRGGRAMGRNRG-GGRGRGPGRGRG-RGRGSGSGSGSGRGHGEKLSAEDLDADLDKYH

Q6NQ72 THO complex subunit 4D8.1e-3348.5Show/hide
Query:  ASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA-VPAPSNAS
        AS +E GT+L+V+NLD GV+NEDI+ELFSE+G+V+RY+I+YDK+GR  GTAE+V+ R++DA  A+K+YNNV LDG+PM+LEI+G N  + A +    N +
Subjt:  ASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA-VPAPSNAS

Query:  FGNPNG-------FPRGGRAMGRNRGGGRGRGP--------------------GRG--RGRGRGSGS-GSGSGRGHGEK---LSAEDLDADLDKYHEEAM
            NG         +GG   GR RGG  GRGP                    GRG  R RGRG+G  G G GRG+G+K    SA DLD DL+ YH +AM
Subjt:  FGNPNG-------FPRGGRAMGRNRGGGRGRGP--------------------GRG--RGRGRGSGS-GSGSGRGHGEK---LSAEDLDADLDKYHEEAM

Q8L719 THO complex subunit 4B1.5e-4762.11Show/hide
Query:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------VP
        S+IETGTKLY+SNLDYGVSNEDIKELFSEVGD+KRY I+YD+SGRSKGTAE+VFSR+ DALAA+KRYNNVQLDGK MK+EIVGTN+  PA        +P
Subjt:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------VP

Query:  APSNASFGNPN----------------GFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQ
         P+N   GN N                G  RGG  MGR RGGG G G  RG    RG G     GRG  E +SAEDLDA+LDKYH+EAM+
Subjt:  APSNASFGNPN----------------GFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQ

Q8L773 THO complex subunit 4A2.0e-4762.57Show/hide
Query:  MFVDHGAAYPSHPPRASA-IETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG
        MF D    + S   R+SA IETGTKLY+SNLDYGV NEDIKELF+EVG++KRY++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGKPMK+EIVG
Subjt:  MFVDHGAAYPSHPPRASA-IETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG

Query:  TNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        TN+ T A P+   A+ GN NG P RGG+   G+ RGGGRG     G GRG G G G   G+G  EK+SAEDLDADLDKYH   M+ N
Subjt:  TNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

Q94EH8 THO complex subunit 4C5.3e-3246.46Show/hide
Query:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFG
        S +E GT +Y++NLD GV+NEDI+EL++E+G++KRY+I+YDK+GR  G+AE+V+ R++DA+ A+++YNNV LDG+PMKLEI+G N  T + P  +  +  
Subjt:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFG

Query:  NPNG----------FPRGGRAMGRNRGGG-----------------RGRGPGRGRGRGRGSGSGSGSGRGHGEK---LSAEDLDADLDKYHEEAMQIN
          NG            RGGR +GR RG G                  GRG  RGRGRG G G G+ SG   G+K    SA DLD DL+ YH EAM I+
Subjt:  NPNG----------FPRGGRAMGRNRGGG-----------------RGRGPGRGRGRGRGSGSGSGSGRGHGEK---LSAEDLDADLDKYHEEAMQIN

Arabidopsis top hitse value%identityAlignment
AT5G02530.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-4862.11Show/hide
Query:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------VP
        S+IETGTKLY+SNLDYGVSNEDIKELFSEVGD+KRY I+YD+SGRSKGTAE+VFSR+ DALAA+KRYNNVQLDGK MK+EIVGTN+  PA        +P
Subjt:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------VP

Query:  APSNASFGNPN----------------GFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQ
         P+N   GN N                G  RGG  MGR RGGG G G  RG    RG G     GRG  E +SAEDLDA+LDKYH+EAM+
Subjt:  APSNASFGNPN----------------GFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQ

AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.3e-4962.03Show/hide
Query:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------VP
        S+IETGTKLY+SNLDYGVSNEDIKELFSEVGD+KRY I+YD+SGRSKGTAE+VFSR+ DALAA+KRYNNVQLDGK MK+EIVGTN+  PA        +P
Subjt:  SAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPA--------VP

Query:  APSNASFGNPN-------------GFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQ
         P+N   GN N              F   G  MGR RGGG G G  RG    RG G     GRG  E +SAEDLDA+LDKYH+EAM+
Subjt:  APSNASFGNPN-------------GFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQ

AT5G59950.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-4862.57Show/hide
Query:  MFVDHGAAYPSHPPRASA-IETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG
        MF D    + S   R+SA IETGTKLY+SNLDYGV NEDIKELF+EVG++KRY++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGKPMK+EIVG
Subjt:  MFVDHGAAYPSHPPRASA-IETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG

Query:  TNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        TN+ T A P+   A+ GN NG P RGG+   G+ RGGGRG     G GRG G G G   G+G  EK+SAEDLDADLDKYH   M+ N
Subjt:  TNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

AT5G59950.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-4862.57Show/hide
Query:  MFVDHGAAYPSHPPRASA-IETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG
        MF D    + S   R+SA IETGTKLY+SNLDYGV NEDIKELF+EVG++KRY++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGKPMK+EIVG
Subjt:  MFVDHGAAYPSHPPRASA-IETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG

Query:  TNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        TN+ T A P+   A+ GN NG P RGG+   G+ RGGGRG     G GRG G G G   G+G  EK+SAEDLDADLDKYH   M+ N
Subjt:  TNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN

AT5G59950.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-4862.57Show/hide
Query:  MFVDHGAAYPSHPPRASA-IETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG
        MF D    + S   R+SA IETGTKLY+SNLDYGV NEDIKELF+EVG++KRY++++D+SGRSKGTAE+V+SR+ DALAA+K+YN+VQLDGKPMK+EIVG
Subjt:  MFVDHGAAYPSHPPRASA-IETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG

Query:  TNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN
        TN+ T A P+   A+ GN NG P RGG+   G+ RGGGRG     G GRG G G G   G+G  EK+SAEDLDADLDKYH   M+ N
Subjt:  TNIVTPAVPAPSNASFGNPNGFP-RGGRAM-GRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTAGATCACGGTGCGGCTTATCCTTCACATCCTCCACGGGCTTCTGCTATTGAAACTGGCACCAAGCTTTATGTTTCTAATTTGGATTATGGTGTCTCCAATGA
AGATATCAAGGAGCTGTTTTCTGAAGTTGGTGATGTCAAACGGTATTCTATCAATTATGATAAAAGTGGGAGATCGAAGGGAACAGCAGAGATTGTTTTTTCACGACAAG
CAGATGCTCTTGCTGCTATAAAGAGATATAACAATGTTCAGCTGGATGGGAAGCCCATGAAGTTGGAGATTGTTGGCACTAACATCGTTACACCTGCTGTGCCTGCTCCT
TCAAATGCTAGTTTTGGGAATCCTAATGGATTTCCGAGAGGTGGACGTGCAATGGGTCGAAACCGAGGTGGTGGACGAGGGCGTGGTCCTGGAAGAGGGCGTGGGCGTGG
ACGTGGGAGTGGGAGTGGGAGTGGGAGTGGCAGAGGTCATGGTGAGAAGTTATCAGCCGAAGATCTAGATGCGGATTTGGACAAGTACCATGAAGAAGCGATGCAGATCA
ATTAA
mRNA sequenceShow/hide mRNA sequence
ATTTGATAGCACGAAATTCTTCGCAATTGGCTTCTTCCCTAATTTGCTCACAACATCACCACATCGTTCGATCGGAACCCTAGAAATTGTTATCTCCGATCCACGACCAC
CAATGGCAGAGCCTCTCGACATGAGCTTAGATGATATCATCAAGAACAACAAGAAATCCGGCTCCTCAAACTTCAGAGCTCGTGGCGGAGCTTCTTCTGGACCAGGTCCT
TCTCGCCGCTTTCGCAATCGTGGTCTTAATAGAGCAACGCCTTATTCTACTTCCAAGGTGAAGGATTTGGGTTTTAACATCCCGATTTCCCTCAATCTTACTACCATCGC
CTTCCTCTACCTCTTCTTCTTCTTCTACTACTACTACTACTTCTTCTTCTTCTTCTTCTACTGCCAGTTTCTCATTCTTTTCAAAACGGACTTGGGTATTTTCTTTTTTT
AATGTTTTAAAAAACATGGGGGTTTAGGCGCCCGAGACGGCTTGGTCACACGACATGTTTGTAGATCACGGTGCGGCTTATCCTTCACATCCTCCACGGGCTTCTGCTAT
TGAAACTGGCACCAAGCTTTATGTTTCTAATTTGGATTATGGTGTCTCCAATGAAGATATCAAGGAGCTGTTTTCTGAAGTTGGTGATGTCAAACGGTATTCTATCAATT
ATGATAAAAGTGGGAGATCGAAGGGAACAGCAGAGATTGTTTTTTCACGACAAGCAGATGCTCTTGCTGCTATAAAGAGATATAACAATGTTCAGCTGGATGGGAAGCCC
ATGAAGTTGGAGATTGTTGGCACTAACATCGTTACACCTGCTGTGCCTGCTCCTTCAAATGCTAGTTTTGGGAATCCTAATGGATTTCCGAGAGGTGGACGTGCAATGGG
TCGAAACCGAGGTGGTGGACGAGGGCGTGGTCCTGGAAGAGGGCGTGGGCGTGGACGTGGGAGTGGGAGTGGGAGTGGGAGTGGCAGAGGTCATGGTGAGAAGTTATCAG
CCGAAGATCTAGATGCGGATTTGGACAAGTACCATGAAGAAGCGATGCAGATCAATTAAATCATTTGGTGTCATTTTCTGGGGCTTGATATCCCTAACTACGTTAGGTGC
TTGATGATGAATGTGATGAGGACATGTTTTTCTATTTTCGAGTCATATCATGAAGCCCTGACCTTGAGAGAATTGCTAGACGTTGCTAGGATGTGGAGTTTGGGCTTGTT
TTGTTGTTTTGTTCCAGTAAACTATTAAGAGAGGTGTTCATATATGCTTGATTTTGTAATCTCCCGTTTCCAACCTATTTTAATCTTCTTCAAACCTATTTATTTTACAC
GAAAATTGCACTGGAACTGGCAAAGTTGATCACTCACACTCCTTGTCTACATGGGAGGATTTGTGTCCATGACATGGGAAGTATTGGTCCTAACAAAATCAACCACATCT
GGTGTTGAGGCTACAGTTCCGCGATTGGTTTTAAAACTAATGTGTTAAGATCTTCTACTTGTTGGCATGGAGAGGGAGGGAGGGGTGTGGAGTTGATTACCAAATGTTCA
GAAGTTGGCATCGACTTCTGAAGCCCCTGAACCATTTAGAATTGGTATGCAGAAATAAGTCATTGGTGTGTGTGGCTTTTACATTCCTGTGGTTATAGGGTTGCAGTTTT
GTTTCTTCTGCTGATTTTGTTTGAGAACATTCCAGAATTTTGCATTCAATAATTAGAATGCAAAAAGGCATATACCATACAATGATTTTGGCATTCTGCAGTTTTTGGGT
TTCTTTTCTGATTTTCATTTTAGTTTTGATTTTAAGATCTTTAGAAAGCCATAAATTCCATTGCACTAGTGGGGTAGAAATTCCATTGCAGTTTTGGTCAGAGTAGGACC
AACACTGAAGCTACAAAAGTAATACATTTTAGTTCTTAGATTTTGTTTCTATATTATGGTTAGGTTATTACTCAGATTGTTGTAATAATTTGTTTGGGAACTTAACATGT
TGGCTCTATTTCTTTGGTGGTTATCCCTTCAAGATGATAGTAATTTAATGTTGTGATCTATGCTTTTTGCCCTCTAAAGTATGTCTTTAACAAGTACGTGTGATTTTGAT
CATTTGGTCTTTTGTTACTTATTAATTTTGGTTATCAAGTTATGTGGTTGTAATATTTTGAATTATGAGAACACGTTTTTTGGACTAGGGATTTGGGATTCAAGCCATTG
GCCTTGTGGTCAATTATATGTGTACCTAAAACTAACATTCTAAATCGATTTGATTATTTCAACACTCTATTTGTTTCCCTAACACTCTAGTTTCTAGATTATCATTACAA
GAAAAAGAAATGGACTTAAAATTTTGTAGTTAATTCGACATGAGCGTATAATTAGTTTGGAAACAAGGCAAAGAATTTTGTAGCTCCAAATATTGGGGGATTGTAAGGTT
TATTTTAAAGAAATTATTGTTTCGGATGGTCAGACTGCTAATCGTGCGTGTGGATAGGCCGTATTAGGAACCCTTTTATGGAGCATATGAAACAAACCAAACAATCTTCT
CTTCAATGATAGACTCTATGAAGATAACTTCTAAAAGACTTAATTGAATTAAGTTTTAATGAATACAGATAGCCCAAATCATTGCTAG
Protein sequenceShow/hide protein sequence
MFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAP
SNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN