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CsGy1G022230 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G022230
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionDouble-stranded RNA-binding protein 2-like
Genome locationGy14Chr1:21039159..21040022
RNA-Seq ExpressionCsGy1G022230
SyntenyCsGy1G022230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653233.1 hypothetical protein Csa_019953 [Cucumis sativus]4.46e-9098.54Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRRSRP
         AMVKAAASQVSSGALLFLFRRLLCCV KVDGRRSRP
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRRSRP

XP_008457578.1 PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo]5.24e-8090.23Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR++PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGR
        FAMVKAAA+Q SSGAL+ +FRRLLCCV KVDGR
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGR

XP_011648508.1 uncharacterized protein LOC105434501 [Cucumis sativus]3.28e-9098.54Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRRSRP
         AMVKAAASQVSSGALLFLFRRLLCCV KVDGRRSRP
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRRSRP

XP_022970388.1 uncharacterized protein LOC111469389 [Cucurbita maxima]2.17e-6073.88Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTFSRED  V E+T Q C GK++RRRR PA IRGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRR
        FA+V+AAA++ SSGALL +FRRLLCCV KVDGR+
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRR

XP_023519361.1 uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo]2.95e-5872.39Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISEC+++ CI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTFSRED  V E+T Q C GK++RRRR PA IRGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRR
        FA+V+AAA++ SSGALL +FRRLL CV KVDGR+
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRR

TrEMBL top hitse value%identityAlignment
A0A0A0LXY3 Uncharacterized protein1.59e-9098.54Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRRSRP
         AMVKAAASQVSSGALLFLFRRLLCCV KVDGRRSRP
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRRSRP

A0A1S3C748 uncharacterized protein LOC1034972452.54e-8090.23Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR++PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGR
        FAMVKAAA+Q SSGAL+ +FRRLLCCV KVDGR
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGR

A0A5A7SXG3 Uncharacterized protein2.54e-8090.23Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR++PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGR
        FAMVKAAA+Q SSGAL+ +FRRLLCCV KVDGR
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGR

A0A6J1HP59 uncharacterized protein LOC1114647452.88e-5872.39Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTF RED VV E+T Q C GK++ RRR PA IRGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRR
        FA+V+AAA++ SSGALL +FRRLL CV KVDGR+
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRR

A0A6J1I3Q2 uncharacterized protein LOC1114693891.05e-6073.88Show/hide
Query:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTFSRED  V E+T Q C GK++RRRR PA IRGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRC

Query:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRR
        FA+V+AAA++ SSGALL +FRRLLCCV KVDGR+
Subjt:  FAMVKAAASQVSSGALLFLFRRLLCCVNKVDGRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46300.1 unknown protein6.5e-0633.81Show/hide
Query:  MASVCISECV----DNACIVSAARP--TYVNLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPA
        MAS CI +CV    D+ C+    RP  TY NL +W   E       + +  + R    D IS RQMYLRSYTFS E+    E       G+   RR   +
Subjt:  MASVCISECV----DNACIVSAARP--TYVNLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPA

Query:  TIRGGRRRSRCFAMVKAAASQVSSGALLFLFRRLLCCVN
          RGG  R +  A   A  +  +     F+FR +  C++
Subjt:  TIRGGRRRSRCFAMVKAAASQVSSGALLFLFRRLLCCVN

AT3G46310.1 unknown protein2.7e-0440.54Show/hide
Query:  MASVCISECV---DNACIVSAARPTYVNLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSRED
        MAS CI +CV   +NA  V   R T+  + +W   E       S +    R  A + +S RQMYLRSYTFSR++
Subjt:  MASVCISECV---DNACIVSAARPTYVNLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSRED

AT5G02640.1 unknown protein1.3e-1136.54Show/hide
Query:  MASVCISECVDNA----CIVSAARPTYVNLQRWSEEE-KWSTERRR----PRPRAADGISRRQMYLRSYTFSRED-----IVVPETTTQNCFGKIR---R
        M SVCIS C+++A      V   R +YVNL +W E + ++    RR    P  R  D IS RQMYLRSYTFSRED       V   T  +C G+++    
Subjt:  MASVCISECVDNA----CIVSAARPTYVNLQRWSEEE-KWSTERRR----PRPRAADGISRRQMYLRSYTFSRED-----IVVPETTTQNCFGKIR---R

Query:  RRRKPATIRG--------GRRRSRCFAMVKAAASQVSSGALLFLFRRLLCCVNKVD
         RRK     G         RRR     + +    + +   +L +FRRLL C   VD
Subjt:  RRRKPATIRG--------GRRRSRCFAMVKAAASQVSSGALLFLFRRLLCCVNKVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTCTCTGCTGCCCGGCCGACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAAAAGTGG
TCTACAGAGCGCCGCCGTCCAAGGCCGAGAGCGGCTGACGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACATCGTTGTCCCT
GAGACTACAACTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCGGAAGCCAGCGACGATTCGCGGCGGTCGTAGGAGGAGCCGATGTTTCGCCATGGTGAAG
GCCGCCGCCAGTCAGGTTTCTTCCGGCGCCTTGCTCTTCTTGTTCCGAAGGTTGCTTTGTTGCGTCAACAAAGTCGACGGTCGTCGCTCACGGCCGTAA
mRNA sequenceShow/hide mRNA sequence
CTTGACATTAATCATCTTTCTTAGTTGTAATCTCAACTACACACAAAAATCCATTTCCCCATTTTCAAAATTCTCTAAAATTCTATCATTTTCGCCGGAATTTCT
TCATCGAAGCTACGATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTCTCTGCTGCCCGGCCGACGTACGTCAACCTGCAGCGGTGGTCGG
AGGAGGAAAAGTGGTCTACAGAGCGCCGCCGTCCAAGGCCGAGAGCGGCTGACGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGG
ACATCGTTGTCCCTGAGACTACAACTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCGGAAGCCAGCGACGATTCGCGGCGGTCGTAGGAGGAGCCGATGTT
TCGCCATGGTGAAGGCCGCCGCCAGTCAGGTTTCTTCCGGCGCCTTGCTCTTCTTGTTCCGAAGGTTGCTTTGTTGCGTCAACAAAGTCGACGGTCGTCGCTCAC
GGCCGTAAGTGTTTGTGAATTTTGTGAAATCAAAGGTTTCTTTTTTCTTTTTTTTGTCTTCTTTTCAATGAAATAGGCAAATATGAAATAAAGGTAAAGGAAACA
TAAAATTACAGTCCGTGGAGGGGCACCATGATCACCATCTAGTTGGGATGAACAATGGGTCATGATCACTTGGCACCTATTAGTCGACGAGTCACTCTATGAGTC
ATCAATTAGTTTACATTCGACCTCCTCAATAATGACGTATATACACAAATCTAAATATTGTGAGCTTACATCTTCACTTCATTAAGGATCATCTCCACCTCCCAA
ATTTCATTTCCTTTTCCTATTGTG
Protein sequenceShow/hide protein sequence
MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRCFAMVK
AAASQVSSGALLFLFRRLLCCVNKVDGRRSRP