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CsGy1G022510 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G022510
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationGy14Chr1:21521538..21521985
RNA-Seq ExpressionCsGy1G022510
SyntenyCsGy1G022510
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653243.1 hypothetical protein Csa_019947 [Cucumis sativus]7.82e-8099.19Show/hide
Query:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEYCTDRWFKVDGHCPIYRTFVCVV
        MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEYCTDRWFKVDGHCPIYRTFVCVV
Subjt:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEYCTDRWFKVDGHCPIYRTFVCVV

Query:  VVDRGGIAMASSSSLPTPFINRI
        VVDR GIAMASSSSLPTPFINRI
Subjt:  VVDRGGIAMASSSSLPTPFINRI

XP_004153928.3 RING-H2 finger protein ATL67 [Cucumis sativus]9.87e-5968.46Show/hide
Query:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------
        MPLSPSPL PLHSPILL GFFMVL+T+SML LIVLFLFI ILCTKRSAK+DGEE  +NLDIEAPIFHY GVE  EQE                       
Subjt:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------

Query:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI
            C DRWFKV+GHCPI RT VC+VV+DRGG AMASSSSLPTPFINRI
Subjt:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI

XP_011648512.2 RING-H2 finger protein ATL79 [Cucumis sativus]3.29e-5768.46Show/hide
Query:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------
        MPLSPSPL PLHSPILL GFFMVL+T+SML LIVLFLFI ILCTKRSAK DGEE  ENLDIEAPIFHY GVEG EQE                       
Subjt:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------

Query:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI
            C DRWFKV+GHCPI RT VC+VV+DRGG AMASSSSL TPFIN+I
Subjt:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI

XP_011659772.1 RING-H2 finger protein ATL39 [Cucumis sativus]8.54e-5366.44Show/hide
Query:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------
        MPLSPSP+  LHS ILL GF M LLT+ ML LIVLF FI+ILC KRSAK DGEEL ENLDIEAPIFHY GVEG EQE                       
Subjt:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------

Query:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI
            C DRWFKVDGHCPI RT VCVVVVD GG AMASSSSLPTPFIN+I
Subjt:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI

XP_011659858.1 E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]1.40e-5871.14Show/hide
Query:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------
        MPLSPSPL PLHSPILL GFFMVLLTISML LIVLFLFI ILCTKRSAK D EEL ENLDIEAPIFHY  VEG EQE                       
Subjt:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------

Query:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI
            C DRWFKV+GHCPI RT VCVVV+DRGG AMASSSSLPTPFINRI
Subjt:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI

TrEMBL top hitse value%identityAlignment
A0A0A0K790 RING-type domain-containing protein5.68e-5366.44Show/hide
Query:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------
        MPLSPSP+  LHS ILL GF M LLT+ ML LIVLF FI+ILC KRSAK DGEEL ENLDIEAPIFHY GVEG EQE                       
Subjt:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------

Query:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI
            C DRWFKVDGHCPI RT VCVVVVD GG AMASSSSLPTPFIN+I
Subjt:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFINRI

A0A0A0LUU6 RING-type E3 ubiquitin transferase1.51e-4665.62Show/hide
Query:  MVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY--------------------------CTDRWFKVDGHCPIYRT
        MVL+T+SML LIVLFLFI ILCTKRSAK+DGEE  +NLDIEAPIFHY GVEG EQE                           C DRWFKV+GHCPI RT
Subjt:  MVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY--------------------------CTDRWFKVDGHCPIYRT

Query:  FVCVVVVDRGGIAMASSSSLPTPFINRI
         VC+VV+DRGG AMASSSSLPTPFINRI
Subjt:  FVCVVVVDRGGIAMASSSSLPTPFINRI

A0A0A0LY10 RING-type E3 ubiquitin transferase2.04e-3655.1Show/hide
Query:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------
        M LSPSPL  LHS ILL  +   LL  SM   IVL LFI ILC KRSAK D EE  EN+DIEAPIFHY G EG EQ+                       
Subjt:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY----------------------

Query:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFIN
            C  RWFKVDGHCPI RT VCVVVVDRGG A+ SS+SL  P++N
Subjt:  ----CTDRWFKVDGHCPIYRTFVCVVVVDRGGIAMASSSSLPTPFIN

A0A0A0LY13 RING-type E3 ubiquitin transferase5.73e-3152.89Show/hide
Query:  ISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY--------------------------CTDRWFKVDGHCPIYRTFVCVV
        +SM   IVL  FI I+C+KR AK D EEL +N+D+EA +FHY G EG EQEY                          C DRWFKVD HCPI RT VCVV
Subjt:  ISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEY--------------------------CTDRWFKVDGHCPIYRTFVCVV

Query:  VVDRGGIAMASSSSLPTPFIN
        VVD GG AMASS+SLP P++N
Subjt:  VVDRGGIAMASSSSLPTPFIN

A0A0A0M0G7 Uncharacterized protein4.60e-81100Show/hide
Query:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEYCTDRWFKVDGHCPIYRTFVCVV
        MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEYCTDRWFKVDGHCPIYRTFVCVV
Subjt:  MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEYCTDRWFKVDGHCPIYRTFVCVV

Query:  VVDRGGIAMASSSSLPTPFINRI
        VVDRGGIAMASSSSLPTPFINRI
Subjt:  VVDRGGIAMASSSSLPTPFINRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTGTCACCGTCGCCTCTATCGCCGTTGCACTCTCCGATCCTACTTTCTGGCTTCTTTATGGTTTTGCTGACAATCTCCATGCTTTTTCTCATTGTGCTA
TTTTTATTCATTGTCATTTTATGTACAAAACGATCAGCCAAATTTGACGGGGAAGAGTTGCTGGAGAATCTGGACATTGAAGCACCAATTTTTCATTACATCGGA
GTTGAAGGCAGCGAACAAGAATACTGCACTGACCGGTGGTTTAAGGTGGATGGCCATTGTCCAATTTATCGGACCTTCGTTTGTGTGGTAGTCGTTGATCGCGGT
GGAATTGCCATGGCTTCTTCTTCATCTTTACCGACCCCCTTCATCAATCGAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTGTCACCGTCGCCTCTATCGCCGTTGCACTCTCCGATCCTACTTTCTGGCTTCTTTATGGTTTTGCTGACAATCTCCATGCTTTTTCTCATTGTGCTA
TTTTTATTCATTGTCATTTTATGTACAAAACGATCAGCCAAATTTGACGGGGAAGAGTTGCTGGAGAATCTGGACATTGAAGCACCAATTTTTCATTACATCGGA
GTTGAAGGCAGCGAACAAGAATACTGCACTGACCGGTGGTTTAAGGTGGATGGCCATTGTCCAATTTATCGGACCTTCGTTTGTGTGGTAGTCGTTGATCGCGGT
GGAATTGCCATGGCTTCTTCTTCATCTTTACCGACCCCCTTCATCAATCGAATTTAA
Protein sequenceShow/hide protein sequence
MPLSPSPLSPLHSPILLSGFFMVLLTISMLFLIVLFLFIVILCTKRSAKFDGEELLENLDIEAPIFHYIGVEGSEQEYCTDRWFKVDGHCPIYRTFVCVVVVDRG
GIAMASSSSLPTPFINRI