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CsGy1G022545 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G022545
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRING-type domain-containing protein
Genome locationGy14Chr1:21557135..21557545
RNA-Seq ExpressionCsGy1G022545
SyntenyCsGy1G022545
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067735.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa]7.48e-7173.33Show/hide
Query:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD-----YECV
        MP NG EA+FDD++++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFSY REAK SENDDD     YECV
Subjt:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD-----YECV

Query:  ICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        ICLNKFED QKC+WMKKCGHIFH SCIDRWL+TERECPLCR+CVCVVV P
Subjt:  ICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

KAE8653246.1 hypothetical protein Csa_019623 [Cucumis sativus]1.25e-7399.02Show/hide
Query:  KTGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVV
        K GNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVV
Subjt:  KTGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVV

Query:  NP
        NP
Subjt:  NP

XP_004151032.1 RING-H2 finger protein ATL66 [Cucumis sativus]9.31e-101100Show/hide
Query:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQW
        MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQW
Subjt:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQW

Query:  MKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        MKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
Subjt:  MKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

XP_008457571.1 PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo]5.10e-7173.83Show/hide
Query:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD----YECVI
        MP NG EA+FDD++++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFSY REAK SENDDD    YECVI
Subjt:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD----YECVI

Query:  CLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        CLNKFED QKC+WMKKCGHIFH SCIDRWL+TERECPLCR+CVCVVV P
Subjt:  CLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]3.24e-3858.2Show/hide
Query:  LAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVE-DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCID
        L AICF II+Y +   F+      +SE ++G+     LPV RE EIV+IE  VFSY REA G  +D   EC ICL++FEDGQKC+ M KCGHIFH  CID
Subjt:  LAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVE-DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCID

Query:  RWLRTERECPLCRSCVCVVVNP
        RWL+ +R CPLCRSCVCVVV+P
Subjt:  RWLRTERECPLCRSCVCVVVNP

TrEMBL top hitse value%identityAlignment
A0A0A0LXE1 RING-type domain-containing protein4.51e-101100Show/hide
Query:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQW
        MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQW
Subjt:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQW

Query:  MKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        MKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
Subjt:  MKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

A0A1S3C6H7 RING-H2 finger protein ATL66-like2.47e-7173.83Show/hide
Query:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD----YECVI
        MP NG EA+FDD++++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFSY REAK SENDDD    YECVI
Subjt:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD----YECVI

Query:  CLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        CLNKFED QKC+WMKKCGHIFH SCIDRWL+TERECPLCR+CVCVVV P
Subjt:  CLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

A0A5A7VPW6 RING-H2 finger protein ATL66-like3.62e-7173.33Show/hide
Query:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD-----YECV
        MP NG EA+FDD++++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFSY REAK SENDDD     YECV
Subjt:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD-----YECV

Query:  ICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        ICLNKFED QKC+WMKKCGHIFH SCIDRWL+TERECPLCR+CVCVVV P
Subjt:  ICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

A0A5D3BGV5 RING-H2 finger protein ATL66-like2.47e-7173.83Show/hide
Query:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD----YECVI
        MP NG EA+FDD++++AAICFAIIVYF+SFT YFKTGNN+    + D GTVE+ LP FRER      EIVQIE MVFSY REAK SENDDD    YECVI
Subjt:  MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNE---SEFDTGTVEDRLPVFRER------EIVQIETMVFSYYREAKGSENDDD----YECVI

Query:  CLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        CLNKFED QKC+WMKKCGHIFH SCIDRWL+TERECPLCR+CVCVVV P
Subjt:  CLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

A0A6J1KAT3 RING-type E3 ubiquitin transferase1.57e-3858.2Show/hide
Query:  LAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVE-DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCID
        L AICF II+Y +   F+      +SE ++G+     LPV RE EIV+IE  VFSY REA G  +D   EC ICL++FEDGQKC+ M KCGHIFH  CID
Subjt:  LAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVE-DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCID

Query:  RWLRTERECPLCRSCVCVVVNP
        RWL+ +R CPLCRSCVCVVV+P
Subjt:  RWLRTERECPLCRSCVCVVVNP

SwissProt top hitse value%identityAlignment
Q9LF64 RING-H2 finger protein ATL528.4e-1138.67Show/hide
Query:  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        E+M+   + Y+   G    D  +C +CL++FE+ +  + + KC H FH  CID WL++   CPLCR+ V  V NP
Subjt:  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

Q9LRB7 E3 ubiquitin-protein ligase EL51.7e-1145.76Show/hide
Query:  ENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        E+DD  EC +CL + EDG++ +++ +CGH FH  C+D WL +   CPLCR  V V   P
Subjt:  ENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

Q9LX93 E3 ubiquitin-protein ligase RING12.2e-1143.55Show/hide
Query:  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        KG    D  EC +CLN+FE+ +  + + KC H FH +CID WL + + CPLCR+ V ++  P
Subjt:  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

Q9M0R5 Putative RING-H2 finger protein ATL361.1e-1042.47Show/hide
Query:  EREIVQIETMVFSYYREAKGSE-NDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRS
        E+E+  IE+     Y E KG +      EC ICL++FED +  +WM  C H FH +CID WL +   CP+CR+
Subjt:  EREIVQIETMVFSYYREAKGSE-NDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRS

Q9SRM0 RING-H2 finger protein ATL662.6e-1232.5Show/hide
Query:  AAICFAIIVYFLSFTFYFKTG--NNESEFDTGTVEDRLPVFREREI--VQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSC
        A   F+++++F   T Y        +S     +  DRL   R   +   +I ++     R  + +E +++ EC ICL  FE+G+K + +  C H +HC C
Subjt:  AAICFAIIVYFLSFTFYFKTG--NNESEFDTGTVEDRLPVFREREI--VQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSC

Query:  IDRWLRTERECPLCRSCVCV
        +DRWL+TE  CPLCR  + V
Subjt:  IDRWLRTERECPLCRSCVCV

Arabidopsis top hitse value%identityAlignment
AT2G27940.1 RING/U-box superfamily protein1.7e-1146.77Show/hide
Query:  VFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRS
        V+ Y + AK   N+D   CVICL+ FE+G+  + +  CGH+FH  C+D WL +   CPLCRS
Subjt:  VFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRS

AT3G11110.1 RING/U-box superfamily protein1.9e-1332.5Show/hide
Query:  AAICFAIIVYFLSFTFYFKTG--NNESEFDTGTVEDRLPVFREREI--VQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSC
        A   F+++++F   T Y        +S     +  DRL   R   +   +I ++     R  + +E +++ EC ICL  FE+G+K + +  C H +HC C
Subjt:  AAICFAIIVYFLSFTFYFKTG--NNESEFDTGTVEDRLPVFREREI--VQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSC

Query:  IDRWLRTERECPLCRSCVCV
        +DRWL+TE  CPLCR  + V
Subjt:  IDRWLRTERECPLCRSCVCV

AT4G09120.1 RING/U-box superfamily protein7.8e-1242.47Show/hide
Query:  EREIVQIETMVFSYYREAKGSE-NDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRS
        E+E+  IE+     Y E KG +      EC ICL++FED +  +WM  C H FH +CID WL +   CP+CR+
Subjt:  EREIVQIETMVFSYYREAKGSE-NDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRS

AT5G10380.1 RING/U-box superfamily protein1.6e-1243.55Show/hide
Query:  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        KG    D  EC +CLN+FE+ +  + + KC H FH +CID WL + + CPLCR+ V ++  P
Subjt:  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP

AT5G17600.1 RING/U-box superfamily protein6.0e-1238.67Show/hide
Query:  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP
        E+M+   + Y+   G    D  +C +CL++FE+ +  + + KC H FH  CID WL++   CPLCR+ V  V NP
Subjt:  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACGAACGGGTTCGAAGCCATTTTTGATGACTTTGAGCTTTTGGCAGCCATATGTTTTGCCATTATAGTCTACTTCCTCTCCTTCACTTTCTACTTCAAAACAGG
AAATAATGAATCAGAATTCGACACTGGGACGGTCGAAGATCGATTGCCTGTGTTCCGAGAGCGGGAGATTGTACAGATTGAGACAATGGTTTTCAGTTATTACAGGGAAG
CTAAGGGAAGTGAGAATGATGATGATTACGAATGTGTGATTTGCTTGAATAAATTTGAAGATGGCCAAAAATGCCAATGGATGAAAAAGTGTGGTCATATATTTCATTGT
AGCTGCATCGATCGGTGGCTCAGGACGGAGCGGGAATGTCCGCTTTGCCGAAGCTGCGTTTGCGTCGTCGTCAATCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACGAACGGGTTCGAAGCCATTTTTGATGACTTTGAGCTTTTGGCAGCCATATGTTTTGCCATTATAGTCTACTTCCTCTCCTTCACTTTCTACTTCAAAACAGG
AAATAATGAATCAGAATTCGACACTGGGACGGTCGAAGATCGATTGCCTGTGTTCCGAGAGCGGGAGATTGTACAGATTGAGACAATGGTTTTCAGTTATTACAGGGAAG
CTAAGGGAAGTGAGAATGATGATGATTACGAATGTGTGATTTGCTTGAATAAATTTGAAGATGGCCAAAAATGCCAATGGATGAAAAAGTGTGGTCATATATTTCATTGT
AGCTGCATCGATCGGTGGCTCAGGACGGAGCGGGAATGTCCGCTTTGCCGAAGCTGCGTTTGCGTCGTCGTCAATCCATAA
Protein sequenceShow/hide protein sequence
MPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHC
SCIDRWLRTERECPLCRSCVCVVVNP