CuGenDBv2

Gene ID	CsGy1G022690
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Rab5-interacting
Genome location	Gy14Chr1:21664224..21665883
RNA-Seq Expression	CsGy1G022690
Synteny	CsGy1G022690
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004145291.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

9.39e-87

100

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Query:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
        MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
Subjt:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV

Query:  LLQEGLFASITLFLLMWTLIYSLGHF
        LLQEGLFASITLFLLMWTLIYSLGHF
Subjt:  LLQEGLFASITLFLLMWTLIYSLGHF

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

1.09e-83

96.06

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

3.66e-82

93.7

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

1.05e-81

92.91

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

1.09e-83

96.85

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQ QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

4.55e-87

100

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Query:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
        MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV
Subjt:  MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGV

Query:  LLQEGLFASITLFLLMWTLIYSLGHF
        LLQEGLFASITLFLLMWTLIYSLGHF
Subjt:  LLQEGLFASITLFLLMWTLIYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

5.29e-84

96.06

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

A0A5A7VQ84 Rab5-interacting

3.83e-74

89.76

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQ QNGHLPPFKLA+LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLVISTTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFAS+TLFLL   L   L  F
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

1.77e-82

93.7

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFILFLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

5.08e-82

92.91

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Query:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQ QNGHLPPFKLA LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGG+WFI+FLVISTTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQ-QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASITLFLLMWTLIYSLGHF
        VLLQEGLFASITLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASITLFLLMWTLIYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

2.6e-14

36.04

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Query:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL
        NG L     +K+   + +W DKD+  DV++W RQ +A+V G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL

Query:  LMWTLIYSLGH
        +     ++ GH
Subjt:  LMWTLIYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

7.3e-17

37.5

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Query:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL
        NG L     +K+   + +W DKD+  DV++W RQ +ALV G++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLPPFKLAKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFASITLFL

Query:  LMWTLIYSLGHF
        ++W + Y+  H+
Subjt:  LMWTLIYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

6.9e-47

64.66

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Query:  MKDGKSMKVNSQLQ-------QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEE
        MK+GKS K +SQ +       QN HL  F  AKLFD E SWDKDQLGDVLHW+RQ V L+CGLLWG+IPLVGG+W +LFL IS+ ++YGYYA++LK+DEE
Subjt:  MKDGKSMKVNSQLQ-------QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASITLFLLMWTLIYSLGHF
        +FGGH  LLQ+GLFAS++LFLL W L+YSL  F
Subjt:  EFGGHGVLLQEGLFASITLFLLMWTLIYSLGHF

AT5G59410.1 Rab5-interacting family protein

2.3e-50

72.31

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Query:  MKDGKSMKVNSQLQ----QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFG
        MK+ KS K+N   Q    QN HL P KLAKLFDP+ SWDKDQLGDVLHW+RQ V L+ GLLWGSIPLVGG+W ILFL IS+ ++YGYYAMILKVDEE+FG
Subjt:  MKDGKSMKVNSQLQ----QNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASITLFLLMWTLIYSLGHF
        GH  LLQEGLFAS+TLFLL W L+YSL HF
Subjt:  GHGVLLQEGLFASITLFLLMWTLIYSLGHF

Sequences

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CDS sequence

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ATGAAGGACGGGAAATCTATGAAAGTCAATTCTCAGTTGCAGCAGAATGGTCACTTGCCGCCCTTCAAATTGGCTAAGTTGTTCGATCCAGAGACTTCATGGGAT
AAGGATCAACTAGGAGATGTGTTGCATTGGATGAGACAATCAGTTGCTCTTGTATGTGGGCTGCTTTGGGGCTCCATACCTCTGGTTGGAGGAGTTTGGTTCATC
TTATTCTTGGTGATATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAGGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGG
CTGTTTGCTTCCATAACACTGTTTCTGCTTATGTGGACCCTCATTTATAGCTTGGGACATTTCTGA

mRNA sequence

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Protein sequence

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MKDGKSMKVNSQLQQNGHLPPFKLAKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGVWFILFLVISTTMIYGYYAMILKVDEEEFGGHGVLLQEG
LFASITLFLLMWTLIYSLGHF

CsGy1G022690 (gene) of Cucumber (Gy14) v2.1 genome