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CsGy1G026150 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G026150
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProtein CUP-SHAPED COTYLEDON 3-like
Genome locationGy14Chr1:24835482..24835981
RNA-Seq ExpressionCsGy1G026150
SyntenyCsGy1G026150
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ARA91514.1 NAC domain transcription factor I [Cucumis melo]2.98e-2257.61Show/hide
Query:  SQSVRWIDLSSVHPRKDACIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKD
        ++S+  I  S   P     ++   +DD D+  RNFSSQ Q KSHK LDH+   QNVQSK+ETQ+QVVSSLSK +AVP+RIK+V+PAATSNKD
Subjt:  SQSVRWIDLSSVHPRKDACIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKD

ARA91515.1 NAC domain transcription factor II [Cucumis melo]2.10e-2485.07Show/hide
Query:  DFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKDT
        D D+AV+NF+SQ Q KSHKV DHIKASQNVQSKKETQLQ+VSSLSKVKAVPERI+VVKPAA+SNKDT
Subjt:  DFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKDT

KAE8653385.1 hypothetical protein Csa_007462 [Cucumis sativus]5.43e-7796.83Show/hide
Query:  MKAESDDSDKQLRNFRPRRKLKYHKERDHVESSQSVRWIDLSSVHPRKDACIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVS
        MKAESDDSDKQLRNFRPRRKLKYHKERDHVESSQSVR IDLSSVHPRKDACIKSCGNDDFD+AVRNFSSQRQ KSHKVLDHIKASQNVQSKKETQLQVVS
Subjt:  MKAESDDSDKQLRNFRPRRKLKYHKERDHVESSQSVRWIDLSSVHPRKDACIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVS

Query:  SLSKVKAVPERIKVVKPAATSNKDTK
        SL KVKAVPERIKVVKPAATSNKDTK
Subjt:  SLSKVKAVPERIKVVKPAATSNKDTK

TYK10207.1 protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo var. makuwa]3.31e-4271.2Show/hide
Query:  SDDSDKQLRNFRPRRKLKYHKERDHVESSQSVRWIDLSSVHPRKDA----CIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVS
        S D D+ +RNF  +R+ K HK  DHVESS++ R ID+SS   RKD     CI SCG+ D D+AVRNFSSQRQ KSHKV DHIKASQNVQSKKETQLQ+VS
Subjt:  SDDSDKQLRNFRPRRKLKYHKERDHVESSQSVRWIDLSSVHPRKDA----CIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVS

Query:  SLSKVKAVPERIKVVKPAATSNKDT
        SLSKVKAVPERI+VVKPAA+SNKDT
Subjt:  SLSKVKAVPERIKVVKPAATSNKDT

XP_016900940.1 PREDICTED: uncharacterized protein LOC103492204 [Cucumis melo]3.24e-3285.33Show/hide
Query:  CIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKDT
        CI SCG+ D D+AVRNFS QRQ KSHKV DHIKASQNVQSKKETQLQ+VSSLSKVKAVPERI+VVKPAA+SNKDT
Subjt:  CIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKDT

TrEMBL top hitse value%identityAlignment
A0A0A0LW42 Uncharacterized protein1.54e-6192.59Show/hide
Query:  MKAESDDSDKQLRNFRPRRKLKYHKERDHVESSQSVRWIDLSSVHPRKDACIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVS
        MKAESDDSDKQLRNFRPRRKLKYHKERDHVESSQSVR IDLSSVHPRKDACIKSCGNDDFD+AVRNFSSQRQ KSHKVLDHIKASQNVQSKKETQLQVVS
Subjt:  MKAESDDSDKQLRNFRPRRKLKYHKERDHVESSQSVRWIDLSSVHPRKDACIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVS

Query:  SLSKVKAV
        SL K +++
Subjt:  SLSKVKAV

A0A1S4DYZ1 uncharacterized protein LOC1034922041.57e-3285.33Show/hide
Query:  CIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKDT
        CI SCG+ D D+AVRNFS QRQ KSHKV DHIKASQNVQSKKETQLQ+VSSLSKVKAVPERI+VVKPAA+SNKDT
Subjt:  CIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKDT

A0A5D3CE10 Protein CUP-SHAPED COTYLEDON 3-like1.60e-4271.2Show/hide
Query:  SDDSDKQLRNFRPRRKLKYHKERDHVESSQSVRWIDLSSVHPRKDA----CIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVS
        S D D+ +RNF  +R+ K HK  DHVESS++ R ID+SS   RKD     CI SCG+ D D+AVRNFSSQRQ KSHKV DHIKASQNVQSKKETQLQ+VS
Subjt:  SDDSDKQLRNFRPRRKLKYHKERDHVESSQSVRWIDLSSVHPRKDA----CIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVS

Query:  SLSKVKAVPERIKVVKPAATSNKDT
        SLSKVKAVPERI+VVKPAA+SNKDT
Subjt:  SLSKVKAVPERIKVVKPAATSNKDT

A0A678NU60 NAC domain transcription factor II1.02e-2485.07Show/hide
Query:  DFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKDT
        D D+AV+NF+SQ Q KSHKV DHIKASQNVQSKKETQLQ+VSSLSKVKAVPERI+VVKPAA+SNKDT
Subjt:  DFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKDT

A0A678P124 NAC domain transcription factor I1.44e-2257.61Show/hide
Query:  SQSVRWIDLSSVHPRKDACIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKD
        ++S+  I  S   P     ++   +DD D+  RNFSSQ Q KSHK LDH+   QNVQSK+ETQ+QVVSSLSK +AVP+RIK+V+PAATSNKD
Subjt:  SQSVRWIDLSSVHPRKDACIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPERIKVVKPAATSNKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCCGAAAGTGATGACTCTGACAAGCAGCTAAGAAATTTCAGGCCTCGACGTAAACTTAAATACCATAAGGAACGAGACCATGTAGAGTCTTCACAAAGTGTTCG
ATGGATAGATCTTTCCTCTGTCCACCCTCGTAAAGATGCCTGCATAAAATCGTGCGGAAATGATGACTTTGACAAAGCAGTAAGAAATTTCAGCTCTCAACGTCAATCTA
AATCCCATAAGGTTCTAGACCATATCAAAGCTTCACAAAATGTCCAGTCCAAGAAGGAAACTCAACTCCAAGTAGTGTCATCCCTTAGCAAGGTTAAAGCAGTTCCAGAA
CGAATTAAAGTTGTCAAACCAGCTGCAACTTCAAATAAAGATACTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCCGAAAGTGATGACTCTGACAAGCAGCTAAGAAATTTCAGGCCTCGACGTAAACTTAAATACCATAAGGAACGAGACCATGTAGAGTCTTCACAAAGTGTTCG
ATGGATAGATCTTTCCTCTGTCCACCCTCGTAAAGATGCCTGCATAAAATCGTGCGGAAATGATGACTTTGACAAAGCAGTAAGAAATTTCAGCTCTCAACGTCAATCTA
AATCCCATAAGGTTCTAGACCATATCAAAGCTTCACAAAATGTCCAGTCCAAGAAGGAAACTCAACTCCAAGTAGTGTCATCCCTTAGCAAGGTTAAAGCAGTTCCAGAA
CGAATTAAAGTTGTCAAACCAGCTGCAACTTCAAATAAAGATACTAAGTGA
Protein sequenceShow/hide protein sequence
MKAESDDSDKQLRNFRPRRKLKYHKERDHVESSQSVRWIDLSSVHPRKDACIKSCGNDDFDKAVRNFSSQRQSKSHKVLDHIKASQNVQSKKETQLQVVSSLSKVKAVPE
RIKVVKPAATSNKDTK