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CsGy1G027675 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G027675
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPhotosystem II PsbX
Genome locationGy14Chr1:26091269..26091640
RNA-Seq ExpressionCsGy1G027675
SyntenyCsGy1G027675
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009518 - Photosystem II PsbX


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653441.1 hypothetical protein Csa_007456 [Cucumis sativus]1.67e-69100Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GVVVVAILGAVIGVANFDP
        GVVVVAILGAVIGVANFDP
Subjt:  GVVVVAILGAVIGVANFDP

XP_008450907.1 PREDICTED: uncharacterized protein LOC103492356 [Cucumis melo]1.02e-6692.68Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSA+SMALPFTHAT KPLSNDAFFNPLPSFKSRKPIA APISNGRI+AVRSS KEKAVAGI+AAAL ASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GVVVVAILGAVIGVANFDPVKRS
        G VVVAI GAVIGVANFDPVKRS
Subjt:  GVVVVAILGAVIGVANFDPVKRS

XP_022960741.1 uncharacterized protein LOC111461452 [Cucurbita moschata]8.30e-5377.78Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLP---SFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI
        MASTS +S+ALP T+AT K LSN AFFNPLP   S +SRK IA AP S+GR++AVRSS KEKA+ G++AAALTASMVIPEVAEAAG GVSPSLKNFLLSI
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLP---SFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI

Query:  AAGGVVVVAILGAVIGVANFDPVKRS
        AAGG VVVAILGAVIGV+NFDPVKR 
Subjt:  AAGGVVVVAILGAVIGVANFDPVKRS

XP_031735956.1 uncharacterized protein LOC116401689 [Cucumis sativus]1.64e-72100Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GVVVVAILGAVIGVANFDPVKRS
        GVVVVAILGAVIGVANFDPVKRS
Subjt:  GVVVVAILGAVIGVANFDPVKRS

XP_038878912.1 uncharacterized protein LOC120071001 [Benincasa hispida]1.14e-6391.06Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSALSMALP T+AT KPLSNDAFFNPLPSFKSRK IA AP SNGRI+AVRSS KEKAVAGI+AAALTASMVIPEVAEAAG GVSPSLKNFLLSIAAG
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GVVVVAILGAVIGVANFDPVKRS
        G VVVAILGAVIGVANFDPVKRS
Subjt:  GVVVVAILGAVIGVANFDPVKRS

TrEMBL top hitse value%identityAlignment
A0A0A0LWL3 Uncharacterized protein7.93e-73100Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GVVVVAILGAVIGVANFDPVKRS
        GVVVVAILGAVIGVANFDPVKRS
Subjt:  GVVVVAILGAVIGVANFDPVKRS

A0A1S3BRD2 uncharacterized protein LOC1034923564.94e-6792.68Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSA+SMALPFTHAT KPLSNDAFFNPLPSFKSRKPIA APISNGRI+AVRSS KEKAVAGI+AAAL ASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GVVVVAILGAVIGVANFDPVKRS
        G VVVAI GAVIGVANFDPVKRS
Subjt:  GVVVVAILGAVIGVANFDPVKRS

A0A6J1H8G2 uncharacterized protein LOC1114614524.02e-5377.78Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLP---SFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI
        MASTS +S+ALP T+AT K LSN AFFNPLP   S +SRK IA AP S+GR++AVRSS KEKA+ G++AAALTASMVIPEVAEAAG GVSPSLKNFLLSI
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLP---SFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI

Query:  AAGGVVVVAILGAVIGVANFDPVKRS
        AAGG VVVAILGAVIGV+NFDPVKR 
Subjt:  AAGGVVVVAILGAVIGVANFDPVKRS

A0A6J1HV97 uncharacterized protein LOC1114677559.49e-4874.8Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MAS  A+SMALP T+A++K LSNDAFFNPLPS +SRK I  AP    R++ V SS KEKAV G++AAAL+A+MVIPEVAEAAG GVSPSLKNFLLSIAAG
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GVVVVAILGAVIGVANFDPVKRS
        GVVV+AILGAVIGV+NFDPVKR 
Subjt:  GVVVVAILGAVIGVANFDPVKRS

A0A6J1J9Y5 uncharacterized protein LOC1114848835.70e-5378.57Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKS---RKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI
        MASTS +S+ALP T AT K LSN AFFNPLP+  S   RK IA AP SNGR++AVRSS KEKA+ G+SAAALTASMVIPEVAEAAG GVSPSLKNFLLSI
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKS---RKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSI

Query:  AAGGVVVVAILGAVIGVANFDPVKRS
        AAGG VVVAILGAVIGV+NFDPVKR 
Subjt:  AAGGVVVVAILGAVIGVANFDPVKRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G06520.1 photosystem II subunit X3.9e-2656.1Show/hide
Query:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG
        MASTSA+S+  P       P     F  PLP   S+  +AT      + L V++   +KA+ GISAAALTASMVIPE+AEAAGSG+SPSLKNFLLSIA+G
Subjt:  MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAG

Query:  GVVVVAILGAVIGVANFDPVKRS
        G+V+  I+G V+GV+NFDPVKR+
Subjt:  GVVVVAILGAVIGVANFDPVKRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTTCCGCTCTTTCAATGGCCTTACCATTCACCCACGCCACCCGCAAGCCACTCTCCAACGACGCTTTCTTCAACCCATTGCCCTCTTTTAAGTCCCGCAA
GCCCATCGCCACTGCTCCCATCTCCAACGGAAGGATCCTCGCCGTTCGATCTTCCTTCAAGGAGAAGGCTGTTGCTGGAATCTCTGCTGCTGCTCTCACCGCGTCGATGG
TCATTCCAGAGGTTGCCGAGGCTGCCGGATCCGGTGTCTCGCCCTCGTTGAAGAACTTCTTGCTGAGTATTGCGGCAGGTGGAGTGGTGGTGGTGGCGATATTGGGGGCG
GTCATCGGCGTCGCCAACTTTGACCCGGTGAAGCGAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACTTCCGCTCTTTCAATGGCCTTACCATTCACCCACGCCACCCGCAAGCCACTCTCCAACGACGCTTTCTTCAACCCATTGCCCTCTTTTAAGTCCCGCAA
GCCCATCGCCACTGCTCCCATCTCCAACGGAAGGATCCTCGCCGTTCGATCTTCCTTCAAGGAGAAGGCTGTTGCTGGAATCTCTGCTGCTGCTCTCACCGCGTCGATGG
TCATTCCAGAGGTTGCCGAGGCTGCCGGATCCGGTGTCTCGCCCTCGTTGAAGAACTTCTTGCTGAGTATTGCGGCAGGTGGAGTGGTGGTGGTGGCGATATTGGGGGCG
GTCATCGGCGTCGCCAACTTTGACCCGGTGAAGCGAAGCTGA
Protein sequenceShow/hide protein sequence
MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAGGVVVVAILGA
VIGVANFDPVKRS