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CsGy1G032977 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy1G032977
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
Genome locationGy14Chr1:32673057..32673282
RNA-Seq ExpressionCsGy1G032977
SyntenyCsGy1G032977
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR041677 - DNA2/NAM7 helicase, helicase domain
IPR045055 - DNA2/NAM7-like helicase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036003.1 regulator of nonsense transcripts 1-like protein [Cucumis melo var. makuwa]2.23e-2494.55Show/hide
Query:  QNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +NASLFFCTVSG+FKLY KSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
Subjt:  QNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

KAE8646153.1 hypothetical protein Csa_015585 [Cucumis sativus]2.71e-2164.47Show/hide
Query:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLK-SLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +  L LPQT+ KR + +FCF+NASLFFCTVS +FKLY + ++ PL+ LVIDEAAQLKECE  IP+Q   IKHAILI
Subjt:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLK-SLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

KAE8653667.1 hypothetical protein Csa_007137, partial [Cucumis sativus]1.71e-45100Show/hide
Query:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
Subjt:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

XP_011659750.2 uncharacterized protein LOC101220392 [Cucumis sativus]2.72e-2164.47Show/hide
Query:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLK-SLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +  L LPQT+ KR + +FCF+NASLFFCTVS +FKLY + ++ PL+ LVIDEAAQLKECE  IP+Q   IKHAILI
Subjt:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLK-SLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

XP_022144472.1 LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like [Momordica charantia]5.30e-2980Show/hide
Query:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +D L LP TTNK TI NFCF+NASLFFCTVS +FKLY KSL PLKA+VIDEAAQLKECE VIPMQL DIKH ILI
Subjt:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

TrEMBL top hitse value%identityAlignment
A0A0A0K7S2 Uncharacterized protein1.30e-2164.47Show/hide
Query:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLK-SLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +  L LPQT+ KR + +FCF+NASLFFCTVS +FKLY + ++ PL+ LVIDEAAQLKECE  IP+Q   IKHAILI
Subjt:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLK-SLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

A0A175YR73 UvrD-like helicase ATP-binding domain-containing protein1.61e-2063.89Show/hide
Query:  LGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        L LP   N+ +I+ FCFQ AS+  CTVS +FKL+   +EPLK LVIDEAAQLKECE VIP+QL  +KHAILI
Subjt:  LGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

A0A5B6YLL5 AAA_11 domain-containing protein (Fragment)1.94e-2160.81Show/hide
Query:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAIL
        ++ L LP   N+R+IV FCFQ ASL FCT S ++KL+   +EPL  LVIDEAAQLKECE +IP+QL  I+HAIL
Subjt:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAIL

A0A5D3E3E0 Regulator of nonsense transcripts 1-like protein1.08e-2494.55Show/hide
Query:  QNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +NASLFFCTVSG+FKLY KSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
Subjt:  QNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

A0A6J1CTS8 LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like2.57e-2980Show/hide
Query:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +D L LP TTNK TI NFCF+NASLFFCTVS +FKLY KSL PLKA+VIDEAAQLKECE VIPMQL DIKH ILI
Subjt:  MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65810.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.1e-1251.43Show/hide
Query:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        LP   +K  +   C  NA L FCT S + +L++ S  P++ LVIDEAAQLKECE  IP+QL  ++HAILI
Subjt:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

AT1G65810.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.1e-1251.43Show/hide
Query:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        LP   +K  +   C  NA L FCT S + +L++ S  P++ LVIDEAAQLKECE  IP+QL  ++HAILI
Subjt:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

AT4G05540.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein3.7e-1145.71Show/hide
Query:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +P    K  I  FC QNA + FCT SG  ++  +    +  LV+DEAAQLKECE V  +QL  + HA+LI
Subjt:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

AT5G37150.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.8e-1144.29Show/hide
Query:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +P       I  FC QNA +  CT SG  ++ ++    ++ LV+DEAAQLKECE V  +QL  ++HAILI
Subjt:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI

AT5G52090.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.8e-1144.29Show/hide
Query:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI
        +P       I  FC QNA +  CT SG  ++ ++    ++ LV+DEAAQLKECE V  +QL  ++HAILI
Subjt:  LPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGCTTGGTCTTCCACAAACTACAAATAAAAGAACCATTGTGAATTTCTGTTTTCAGAATGCTTCATTGTTCTTTTGCACGGTTTCAGGTACGTTTAAGTTGTA
TTTGAAGTCATTAGAGCCATTGAAGGCTTTGGTGATTGATGAAGCAGCACAGTTGAAAGAGTGTGAGTGTGTTATTCCAATGCAACTGGCTGACATAAAGCATGCAATCC
TCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGCTTGGTCTTCCACAAACTACAAATAAAAGAACCATTGTGAATTTCTGTTTTCAGAATGCTTCATTGTTCTTTTGCACGGTTTCAGGTACGTTTAAGTTGTA
TTTGAAGTCATTAGAGCCATTGAAGGCTTTGGTGATTGATGAAGCAGCACAGTTGAAAGAGTGTGAGTGTGTTATTCCAATGCAACTGGCTGACATAAAGCATGCAATCC
TCATAG
Protein sequenceShow/hide protein sequence
MDLLGLPQTTNKRTIVNFCFQNASLFFCTVSGTFKLYLKSLEPLKALVIDEAAQLKECECVIPMQLADIKHAILIX