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CsGy2G000290 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G000290
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRibosomal protein L18ae family
Genome locationGy14Chr2:185940..188520
RNA-Seq ExpressionCsGy2G000290
SyntenyCsGy2G000290
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141063.1 uncharacterized protein LOC101207093 isoform X2 [Cucumis sativus]1.56e-88100Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSILLLIVVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

XP_008459564.1 PREDICTED: uncharacterized protein LOC103498658 [Cucumis melo]1.82e-8797.74Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSI+LLIVVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

XP_011648592.1 uncharacterized protein LOC101207093 isoform X1 [Cucumis sativus]3.82e-10693.06Show/hide
Query:  KLPFH--SFPSIHSSIHLFRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ
        +LP H  +F  + SSI   RFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ
Subjt:  KLPFH--SFPSIHSSIHLFRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ

Query:  VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
        VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
Subjt:  VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL

XP_022946692.1 uncharacterized protein LOC111450686 [Cucurbita moschata]3.85e-8089.31Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPN K+D TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGF FP++WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAV
        +RRDPRERAGLAAS+IAALACS++LL+VVAV
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAV

XP_038889607.1 uncharacterized protein LOC120079478 [Benincasa hispida]1.74e-8595.49Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGK+DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSI+LL+VVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

TrEMBL top hitse value%identityAlignment
A0A0A0LKM2 Uncharacterized protein3.23e-10693.06Show/hide
Query:  KLPFH--SFPSIHSSIHLFRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ
        +LP H  +F  + SSI   RFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ
Subjt:  KLPFH--SFPSIHSSIHLFRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQ

Query:  VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
        VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL
Subjt:  VGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL

A0A1S3CAZ9 uncharacterized protein LOC1034986588.82e-8897.74Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSI+LLIVVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

A0A5D3CGZ6 60S ribosomal protein L18a-18.82e-8897.74Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGFFFPL+WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        ARRDPRERAGLAASAIAALACSI+LLIVVAVLL
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAVLL

A0A6J1G4J6 uncharacterized protein LOC1114506861.86e-8089.31Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPN K+D TVQLVKSVSD+HLDLLRPSARICSIFKGQGKDA DHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGF FP++WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAV
        +RRDPRERAGLAAS+IAALACS++LL+VVAV
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAV

A0A6J1KAT7 uncharacterized protein LOC1114937955.33e-8088.55Show/hide
Query:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN
        MDPN K+D TVQLVKSVSD+HLDLLRP+ARICSIFKGQGKDA DHIRSKYTLLRDVED+QVGLYDKPLPCFGCGIGWFSFLLGF FP++WYYATILYFWN
Subjt:  MDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN

Query:  ARRDPRERAGLAASAIAALACSILLLIVVAV
        +RRDPRERAGLAAS+IAALACS++LL+VVAV
Subjt:  ARRDPRERAGLAASAIAALACSILLLIVVAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54217.1 Ribosomal protein L18ae family3.3e-2262.92Show/hide
Query:  RSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        + KY L+R D ED+++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RDPRER+GLAASAIAAL  S+ L+I V VL+
Subjt:  RSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVAVLL

AT1G54217.2 Ribosomal protein L18ae family1.1e-2260Show/hide
Query:  DAPDHIRSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVAVLL
        D  +  + KY L+R D ED+++G + KPLPCFG GIGWFSFLLGF FP  WY AT LY  +   RDPRER+GLAASAIAAL  S+ L+I V VL+
Subjt:  DAPDHIRSKYTLLR-DVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVAVLL

AT4G26060.1 Ribosomal protein L18ae family4.0e-3661.79Show/hide
Query:  DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPR
        D + +LVKSV+DKH  L+RP A+  S      KDA    + +YTL++DV++ + G+YDKPLPCFGCGIGWFSFLLGF FP LWYYAT+LYF N  R+DPR
Subjt:  DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPR

Query:  ERAGLAASAIAALACSILLLIVV
        ERAGLAASAI A+  S+LLL++V
Subjt:  ERAGLAASAIAALACSILLLIVV

AT5G57060.1 FUNCTIONS IN: molecular_function unknown8.3e-3454.48Show/hide
Query:  MDPNGKM---DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILY
        MD N K    +   +LVK ++D+H  L++ ++R  S      KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP LWYYA  LY
Subjt:  MDPNGKM---DQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILY

Query:  FWN-ARRDPRERAGLAASAIAALACSILLLIVVA
        F N  R+DPRERAGLAASAI A+  S++LL++ A
Subjt:  FWN-ARRDPRERAGLAASAIAALACSILLLIVVA

AT5G57060.2 BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT4G26060.1)1.2e-2966.3Show/hide
Query:  KDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVA
        KDA    + +YTL++DV+D + G YDKPLPCFGCGIGWFSFLLGF FP LWYYA  LYF N  R+DPRERAGLAASAI A+  S++LL++ A
Subjt:  KDAPDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWN-ARRDPRERAGLAASAIAALACSILLLIVVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCATCTACAAATAGAGAGAGTTATGGAAAGCGTGTTCTTTCGTTAATTCATACGCCAATTCCATCTTTGATCCGTCCAAAGCCACAGAAATTGCCGTTTCACTC
GTTTCCATCCATCCACTCATCTATTCATCTGTTTCGGTTTACAAAGTGGATACTGCGAATTCTAAGAGTTCATTCTTCCATAAACACCGGCTTCAGCATGGATCCAAATG
GAAAAATGGACCAGACGGTGCAACTGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGAT
GCTCCAGACCACATAAGGAGCAAATACACACTTCTCAGAGATGTAGAGGATGCTCAAGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGAATAGGATGGTT
TTCTTTCCTCCTGGGGTTTTTTTTCCCATTGCTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTG
CCATTGCTGCACTTGCATGTTCAATCCTCTTGTTAATCGTGGTAGCTGTTCTTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCATCTACAAATAGAGAGAGTTATGGAAAGCGTGTTCTTTCGTTAATTCATACGCCAATTCCATCTTTGATCCGTCCAAAGCCACAGAAATTGCCGTTTCACTC
GTTTCCATCCATCCACTCATCTATTCATCTGTTTCGGTTTACAAAGTGGATACTGCGAATTCTAAGAGTTCATTCTTCCATAAACACCGGCTTCAGCATGGATCCAAATG
GAAAAATGGACCAGACGGTGCAACTGGTGAAATCGGTCTCTGATAAGCATCTTGATCTTTTGAGGCCATCTGCCCGAATTTGTTCAATATTCAAAGGCCAAGGAAAAGAT
GCTCCAGACCACATAAGGAGCAAATACACACTTCTCAGAGATGTAGAGGATGCTCAAGTAGGGCTATATGACAAGCCTCTCCCGTGTTTTGGCTGCGGAATAGGATGGTT
TTCTTTCCTCCTGGGGTTTTTTTTCCCATTGCTGTGGTACTATGCCACGATTCTCTACTTCTGGAATGCTCGCAGAGATCCAAGGGAACGAGCTGGATTAGCTGCGTCTG
CCATTGCTGCACTTGCATGTTCAATCCTCTTGTTAATCGTGGTAGCTGTTCTTCTATGA
Protein sequenceShow/hide protein sequence
MASSTNRESYGKRVLSLIHTPIPSLIRPKPQKLPFHSFPSIHSSIHLFRFTKWILRILRVHSSINTGFSMDPNGKMDQTVQLVKSVSDKHLDLLRPSARICSIFKGQGKD
APDHIRSKYTLLRDVEDAQVGLYDKPLPCFGCGIGWFSFLLGFFFPLLWYYATILYFWNARRDPRERAGLAASAIAALACSILLLIVVAVLL