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CsGy2G001525 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G001525
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionReticulon-like protein
Genome locationGy14Chr2:1045205..1045507
RNA-Seq ExpressionCsGy2G001525
SyntenyCsGy2G001525
Gene Ontology termsGO:0009617 - response to bacterium (biological process)
GO:0005643 - nuclear pore (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60674.2 hypothetical protein Csa_023916, partial [Cucumis sativus]7.22e-5197.65Show/hide
Query:  GVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGKRTANLSLCFSNSIFFFIPKSDHK
        GVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGA KRTANLSLCFSNS+FFFIPKSDHK
Subjt:  GVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGKRTANLSLCFSNSIFFFIPKSDHK
XP_008458672.1 PREDICTED: reticulon-like protein B2 [Cucumis melo]4.32e-2378.08Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MAD SETVQ K VEIADDNINNDQQ IT SPP  SNSDK+D SP   PEDEAAESS+ML+KKQ VHRVLG+GK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
XP_011656361.2 reticulon-like protein B5 [Cucumis sativus]2.12e-2479.45Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MADSSETVQ K VEIADDNINNDQ  IT SPPP SN +KMD S  L PEDE AESSQML+KKQ VHRVLGAGK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
XP_038907010.1 reticulon-like protein B2 [Benincasa hispida]2.13e-0856Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPP--PFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MA+ SET + K VEIAD         IT   P  P SNSD++D SP L  E+ AAE S+ML KKQ VHRVLGAGK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPP--PFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
TrEMBL top hitse value%identityAlignment
A0A0A0KBC8 Reticulon-like protein1.02e-2479.45Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MADSSETVQ K VEIADDNINNDQ  IT SPPP SN +KMD S  L PEDE AESSQML+KKQ VHRVLGAGK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
A0A1S3C9M8 Reticulon-like protein2.09e-2378.08Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MAD SETVQ K VEIADDNINNDQQ IT SPP  SNSDK+D SP   PEDEAAESS+ML+KKQ VHRVLG+GK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
A0A5D3CRK8 Reticulon-like protein2.09e-2378.08Show/hide
Query:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
        MAD SETVQ K VEIADDNINNDQQ IT SPP  SNSDK+D SP   PEDEAAESS+ML+KKQ VHRVLG+GK
Subjt:  MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTCTTCTGAAACCGTACAAACTAAGGGGGTGGAAATCGCCGATGATAATATTAACAATGATCAACAACTCATTACTCTATCTCCCCCGCCGTTCTCTAATTC
CGACAAAATGGACGATTCTCCGTCGCTTCTGCCAGAGGATGAGGCAGCGGAGAGTTCTCAAATGTTAAAGAAAAAGCAACATGTTCATCGTGTTCTTGGCGCCGGAAAGC
GTACGGCTAATCTCTCTTTGTGTTTTTCCAATTCTATATTTTTTTTCATCCCTAAAAGTGACCATAAACGAAAAAATTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTCTTCTGAAACCGTACAAACTAAGGGGGTGGAAATCGCCGATGATAATATTAACAATGATCAACAACTCATTACTCTATCTCCCCCGCCGTTCTCTAATTC
CGACAAAATGGACGATTCTCCGTCGCTTCTGCCAGAGGATGAGGCAGCGGAGAGTTCTCAAATGTTAAAGAAAAAGCAACATGTTCATCGTGTTCTTGGCGCCGGAAAGC
GTACGGCTAATCTCTCTTTGTGTTTTTCCAATTCTATATTTTTTTTCATCCCTAAAAGTGACCATAAACGAAAAAATTGGTGA
Protein sequenceShow/hide protein sequence
MADSSETVQTKGVEIADDNINNDQQLITLSPPPFSNSDKMDDSPSLLPEDEAAESSQMLKKKQHVHRVLGAGKRTANLSLCFSNSIFFFIPKSDHKRKNW