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CsGy2G002790 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G002790
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionVQ domain-containing protein
Genome locationGy14Chr2:1856438..1856881
RNA-Seq ExpressionCsGy2G002790
SyntenyCsGy2G002790
Gene Ontology termsGO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063578.1 hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa]3.79e-3488.16Show/hide
Query:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC
        MMIKAS+ALEFRAIVQQLTGFDSN TPTRRRNQK +SDCARTPS+MFHADR EMEVLKFSDDH M SLLQFD QGC
Subjt:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC

KAG6599333.1 hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia]2.30e-4362.14Show/hide
Query:  MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPS-AMFHADRHEMEVLKFS
        MGKCGEN++      + Q Q+QNPTKVQRKPIKVKYISSPMMIKASNA EFRAIVQQLTGF S++PTRR N K     A+TPS +  HA+  +ME LK S
Subjt:  MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPS-AMFHADRHEMEVLKFS

Query:  DDHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
        D+  M SLL+FD + CF T +N  +L NN M FQ+SC FQ
Subjt:  DDHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ

KGN60779.1 hypothetical protein Csa_019238 [Cucumis sativus]6.10e-96100Show/hide
Query:  MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD
        MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD
Subjt:  MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD

Query:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
        DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
Subjt:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ

XP_010102262.1 sigma factor binding protein 1, chloroplastic [Morus notabilis]1.76e-1244.44Show/hide
Query:  GENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHH
        G +QY N+ H +SQ Q   P+K ++KPIK+KYISSPMM++A+NA EFRAIVQ+LTG +SN      +        RT +    +D  +    +FS D+H
Subjt:  GENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHH

XP_021282108.1 uncharacterized protein LOC110414990 [Herrania umbratica]1.64e-1240.98Show/hide
Query:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLK------FSDDHHMESLLQFDGQGCF
        NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +S+          L + A    + FH D    +V        F DD    S L+FD    +
Subjt:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLK------FSDDHHMESLLQFDGQGCF

Query:  ETQNNNNILPNNIMEFQSSCFF
                +P N+  FQS   F
Subjt:  ETQNNNNILPNNIMEFQSSCFF

TrEMBL top hitse value%identityAlignment
A0A0A0LIA7 VQ domain-containing protein2.95e-96100Show/hide
Query:  MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD
        MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD
Subjt:  MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSD

Query:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
        DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ
Subjt:  DHHMESLLQFDGQGCFETQNNNNILPNNIMEFQSSCFFQ

A0A1R3HNT0 VQ motif-containing protein2.67e-1055Show/hide
Query:  HNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRN
        H+H     +++NPTKV++ PIKV YI SP M+K SNA EFRAIVQ+LTG +S+T  +  N
Subjt:  HNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRN

A0A5A7V7M1 VQ domain-containing protein1.84e-3488.16Show/hide
Query:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC
        MMIKAS+ALEFRAIVQQLTGFDSN TPTRRRNQK +SDCARTPS+MFHADR EMEVLKFSDDH M SLLQFD QGC
Subjt:  MMIKASNALEFRAIVQQLTGFDSN-TPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC

A0A6J1A533 uncharacterized protein LOC1104149907.93e-1340.98Show/hide
Query:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLK------FSDDHHMESLLQFDGQGCF
        NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +S+          L + A    + FH D    +V        F DD    S L+FD    +
Subjt:  NPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLK------FSDDHHMESLLQFDGQGCF

Query:  ETQNNNNILPNNIMEFQSSCFF
                +P N+  FQS   F
Subjt:  ETQNNNNILPNNIMEFQSSCFF

W9RT96 VQ domain-containing protein8.51e-1344.44Show/hide
Query:  GENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHH
        G +QY N+ H +SQ Q   P+K ++KPIK+KYISSPMM++A+NA EFRAIVQ+LTG +SN      +        RT +    +D  +    +FS D+H
Subjt:  GENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGTGTGGAGAGAATCAATACACCAACCACAACCACAGCCAAAGCCAAAGCCAAAACCAAAACCCTACAAAAGTTCAGAGAAAACCCATAAAAGTAAAGTACAT
TTCAAGTCCAATGATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCTTTGACTCCAATACTCCTACTCGCCGGAGGAACCAGAAAT
TGCTCTCCGACTGTGCCCGAACTCCATCTGCAATGTTTCATGCAGATCGTCATGAAATGGAAGTTTTGAAGTTCTCAGATGATCATCACATGGAGTCGCTCCTCCAATTT
GATGGTCAAGGTTGTTTTGAAACACAAAATAATAACAATATTCTTCCCAACAACATTATGGAGTTTCAATCTTCTTGTTTTTTTCAATAG
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTTTCTAACTCTCTCTAATGGGGAAGTGTGGAGAGAATCAATACACCAACCACAACCACAGCCAAAGCCAAAGCCAAAACCAAAACCCTACAAAAGTTCAGAG
AAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACCGGCTTTGACTCCAATACTC
CTACTCGCCGGAGGAACCAGAAATTGCTCTCCGACTGTGCCCGAACTCCATCTGCAATGTTTCATGCAGATCGTCATGAAATGGAAGTTTTGAAGTTCTCAGATGATCAT
CACATGGAGTCGCTCCTCCAATTTGATGGTCAAGGTTGTTTTGAAACACAAAATAATAACAATATTCTTCCCAACAACATTATGGAGTTTCAATCTTCTTGTTTTTTTCA
ATAG
Protein sequenceShow/hide protein sequence
MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQF
DGQGCFETQNNNNILPNNIMEFQSSCFFQ