; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G003310 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G003310
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description40S ribosomal protein S24
Genome locationGy14Chr2:2190796..2194371
RNA-Seq ExpressionCsGy2G003310
SyntenyCsGy2G003310
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001976 - Ribosomal protein S24e
IPR012678 - Ribosomal protein L23/L15e core domain superfamily
IPR018098 - Ribosomal S24e conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139219.1 40S ribosomal protein S24-1 [Cucumis sativus]1.79e-70100Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASDAAKGGKKK
Subjt:  TKASDAAKGGKKK
XP_008455742.1 PREDICTED: 40S ribosomal protein S24-1 [Cucumis melo]1.72e-6897.35Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        +IDVLHPGRPNVSKAELKEKL RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASDAAK GKKK
Subjt:  TKASDAAKGGKKK
XP_022143165.1 40S ribosomal protein S24-1 [Momordica charantia]1.21e-6898.23Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGRPNVSKAELKEKL RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASDAAK GKKK
Subjt:  TKASDAAKGGKKK
XP_022937688.1 40S ribosomal protein S24-1-like [Cucurbita moschata]1.48e-6999.12Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASDAAK GKKK
Subjt:  TKASDAAKGGKKK
XP_022999263.1 40S ribosomal protein S24-1-like [Cucurbita maxima]1.21e-6897.35Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGRPNVSKAELKEKLGRIYDVKDPN+IFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASD+AK GKKK
Subjt:  TKASDAAKGGKKK
TrEMBL top hitse value%identityAlignment
A0A0A0LFK1 40S ribosomal protein S248.69e-71100Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASDAAKGGKKK
Subjt:  TKASDAAKGGKKK
A0A6J1CN14 40S ribosomal protein S245.87e-6998.23Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGRPNVSKAELKEKL RIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASDAAK GKKK
Subjt:  TKASDAAKGGKKK
A0A6J1FGN1 40S ribosomal protein S247.14e-7099.12Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASDAAK GKKK
Subjt:  TKASDAAKGGKKK
A0A6J1HN66 40S ribosomal protein S247.14e-7099.12Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASDAAK GKKK
Subjt:  TKASDAAKGGKKK
A0A6J1KJ42 40S ribosomal protein S245.87e-6997.35Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGRPNVSKAELKEKLGRIYDVKDPN+IFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAKGGKKK
        TKASD+AK GKKK
Subjt:  TKASDAAKGGKKK
SwissProt top hitse value%identityAlignment
P62847 40S ribosomal protein S246.4e-2860.19Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPG+  V K E++EKL ++Y    P+ IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG  K
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAK
               K
Subjt:  TKASDAAK
P62848 40S ribosomal protein S246.4e-2860.19Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPG+  V K E++EKL ++Y    P+ IFVF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG  K
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAK
               K
Subjt:  TKASDAAK
Q8LC83 40S ribosomal protein S24-23.6e-4787.04Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGR NVSKAELKEKL R+Y+VKDPNAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAK
        TKA D  K
Subjt:  TKASDAAK
Q962Q6 40S ribosomal protein S245.3e-3062.04Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        V DVLHPG+P VSK E++EKL ++Y V  P+ +FVF F+T+FGGGKSTGF LIYD+++ AKK+EPK+RL R+GL  K   +RKQ KERKNR KK+RG KK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAK
        +K   AAK
Subjt:  TKASDAAK
Q9SS17 40S ribosomal protein S24-15.6e-4888.89Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGR NVSKAELKEKL R+Y+VKDPNAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAK
        TKA DA K
Subjt:  TKASDAAK
Arabidopsis top hitse value%identityAlignment
AT3G04920.1 Ribosomal protein S24e family protein4.0e-4988.89Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGR NVSKAELKEKL R+Y+VKDPNAIFVFKFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAK
        TKA DA K
Subjt:  TKASDAAK
AT5G28060.1 Ribosomal protein S24e family protein2.6e-4887.04Show/hide
Query:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK
        VIDVLHPGR NVSKAELKEKL R+Y+VKDPNAIF FKFRTHFGGGKS+G+GLIYD+VENAKK+EPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIRGVKK
Subjt:  VIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKK

Query:  TKASDAAK
        TKA D  K
Subjt:  TKASDAAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGTCATTGATGTTCTTCACCCCGGCAGACCCAACGTCTCAAAGGCTGAGCTGAAAGAGAAGCTGGGCAGAATCTATGATGTGAAGGATCCAAATGCCATCTTTGT
TTTCAAATTCAGAACTCACTTCGGTGGTGGAAAATCCACTGGGTTCGGTTTGATCTATGATTCCGTCGAGAATGCAAAGAAGTACGAGCCAAAATACAGGCTAATCAGGA
ATGGCCTCGACACCAAGGTAGAAAAATCAAGAAAGCAAATGAAGGAAAGGAAGAACAGGGCAAAGAAAATCCGAGGTGTTAAGAAGACCAAGGCTTCAGACGCAGCAAAA
GGAGGAAAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
GGGTTTTGTTCTCTCTTTTAACATCCCAATATCAGGACTCTCCTGCCGCTCTTCTCTTCGCCGTCGCCTCCTTCGAGCTTCAAGCCTCCCATCCTCTTCAGCCATGGCGG
ACAAAGCAGTCACCATTCGGACCAGGAAGTTCATGACCAACAGGCTTCTCTCCAGGAAGCAATTCGTGAGTCCTTTGTCTTTGCTTTCCGCATTACTTTATGTTTATTGA
TTCTGCGAGGTTTGATTTTTCTCTTGGCGTCTCTTTTTTTCTTTTTTCCATGTAAGTTCCTTGTTCGGTTTTGATTTTGGACTTAGTTTCTGGATTAGGGTGTAGTGCTA
GTTGCATTTTATTTGGTGCTGAAAATGGTTCGGTTTTGTATTTCATTTTGAGTTTAGGGTTTTAGTGTTGCTTATCTAATTGAAATGAAAATCACTTTCGGGTTAGCGGT
ATATGGTCCTTGATTGGCTATTTGTTTATAATCTTTCTGTTTCGTGATTTATGCAGGTCATTGATGTTCTTCACCCCGGCAGACCCAACGTCTCAAAGGCTGAGCTGAAA
GAGAAGCTGGGCAGAATCTATGATGTGAAGGATCCAAATGCCATCTTTGTTTTCAAATTCAGAACTCACTTCGGTGGTGGAAAATCCACTGGGTTCGGTTTGATCTATGA
TTCCGTCGAGAATGCAAAGAAGTACGAGCCAAAATACAGGCTAATCAGGAATGGCCTCGACACCAAGGTAGAAAAATCAAGAAAGCAAATGAAGGAAAGGAAGAACAGGG
CAAAGAAAATCCGAGGTGTTAAGAAGACCAAGGCTTCAGACGCAGCAAAAGGAGGAAAGAAGAAATAAATTTGCTGGAATTTTGTGCTTATGGTGGGCAAAGATAATCTG
CAGAATTGTGTTTTTTCGTTTAGTAGAGTCCCTTTTAGCTATCTTCTTACTCTTCAATTAAATTATGTTAATCAGTGATTTGGTTGTTGGTGATTAGTGATATGAAAACT
TTAGTTCTTTTGCAAGAGGACAGAATTTTTGACATTACATTTCCTTGTTTCTCTTTTTAATGTTTTGGTTGACACTTTAACCCATTGAGGCTATCATTGGTAGATTATGA
AAATTGATTGATGGGATAATTCCAAAGCTTTATCAAATCTTCTACTTTGAGTTGTTTGAATCATAGAACTATAGTGTATTAACATTAGACTTCTTTTTTAATTATAGATT
GTTCAAAGTAAGAAATGCAATATTAATGTTTGGGATAATAATAATAATGGAAATATTTTAGTATAATGTTTCGGTTTACTCTCTCTCTTTGGACGGTTCGATTTCAATCC
TGAAGGAACGAAGTGTTCTGACTTCACAATTAAAATTAAAGACTCTAATTTAGATGTTTGAGTATTTGTTAATTATCGTTTCGAAGCTTATTATGTTTACTTTCTTCTTC
CTTTGATCTCAACTCCTTCAATGAAATCTTAATTTCTTCTTGAACCAATTCCAATCGCTTCAAGTAAACCTCCATTTCTATAGCTTGTTGCTTCCGCCATCGCTCCTCAA
CCCCCTCTCCGCCACTCGAACCTGGAATCCTTCTTGCGAGACCAACCGGCGGCCATCCGTTACTTATCAACTCCTTGAAAAACGGCGTCAAGCAGCCCTTCGCCACTTCC
TCAACCAATCCTGAAAATTTTCCGATATCGTCGAGTACACTACTTGGCCTCATTGGAATCTCATTTGAATTGCTCGCTTCGCCTGATAGAAACGCCGTGCGACGCCGTTT
TGTTAATTGAATGTCGTCTCGCTCTTCGTATTCGTCTCCGAGGTTCTCTGTTTTCACTTTGGTTTCAGTGAAATTAGGATTAATATCCGCAAGAACTTCGTCTAGGATGC
TATCCTTTGCCGATGTTTGCTTTCTCCCCGAATTTCTGCCCCAAATTTTTCGTGAAATGTCGAAAGTTAATTGTTCGTGTTGGCTTTTGAAAGCCGGTTTCTTGCCGCAA
TTGATCTTGCGCAGAGTGTTCTGGTACTTCCTTTTCAATCTCCGAAGCTTATCGATTAATTGATTTTTGTCGCAACATAGCTGAATTTTCGGTTTGATTTTACGATAGAA
CGCAACGGCGTCTTGTTGCTGAAGGCGGTGACTGGAGATTCGATTCTTCAATGCGTATTCAAGAAAACCGCGCAAGAGCTTGATTTCATCTTCATTCGTCCAGATTGTGG
TTCTCCGTCGTGCCGGAATGGCAACGGTTACGATATTGTTAGTAGTAGCATTGGCAGGGATAGCAATGGCGGTCGGAATGTGATCTTCGATTGGACAGAAACTATTGGTT
TTAGATTGATGCAAATCTGCAGCATCTGTCTCATCTGAAACGGCAGCGTTTTGTTCATTGTTTTGTGCATCTTCTTGGTAAGAATCACCCTGGTATTCATCGTCGTCATC
ATTATTAAGATGTGTTTCATGTTCATCAGAATCAGTGAGTTGA
Protein sequenceShow/hide protein sequence
MQVIDVLHPGRPNVSKAELKEKLGRIYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAK
GGKKK