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CsGy2G004055 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G004055
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGamma-tubulin complex component
Genome locationGy14Chr2:2743404..2744660
RNA-Seq ExpressionCsGy2G004055
SyntenyCsGy2G004055
Gene Ontology termsGO:0000226 - microtubule cytoskeleton organization (biological process)
GO:0015630 - microtubule cytoskeleton (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043242.1 hypothetical protein E6C27_scaffold110G001260 [Cucumis melo var. makuwa]6.47e-0445.05Show/hide
Query:  QMEAIEIAEKVSDRNKFKIEIEEKESDRNKF---ESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLLSRFRLAIGEAVSGCFLVIK
        Q + IE  EKV +    KI IEE  SDRNKF   E Q F      G+ LD  +S  E D+FK+ L LKQRLL  F+    E   G FL  K
Subjt:  QMEAIEIAEKVSDRNKFKIEIEEKESDRNKF---ESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLLSRFRLAIGEAVSGCFLVIK

KAE8648096.1 hypothetical protein Csa_004705 [Cucumis sativus]3.53e-0666.67Show/hide
Query:  TDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQVFGV
        T  K  E +VQ E IE+AEKVSDRNKFKIEIEEKES++NKFE   F +
Subjt:  TDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQVFGV

KAE8651602.1 hypothetical protein Csa_023432 [Cucumis sativus]1.21e-4997.87Show/hide
Query:  MTNIGDDEHSRRRKDTDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLL
        MTNIGDDEHSRRRKDTDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQ +L
Subjt:  MTNIGDDEHSRRRKDTDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLL

TYK01481.1 Gamma-tubulin complex component 6 [Cucumis melo var. makuwa]1.92e-0568.89Show/hide
Query:  TDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQV
        T +K  E +VQ + IEI EKVSDRNKFKI+ EEKESDRNKFE  V
Subjt:  TDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQV

TYK29306.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]9.93e-0445.05Show/hide
Query:  QMEAIEIAEKVSDRNKFKIEIEEKESDRNKF---ESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLLSRFRLAIGEAVSGCFLVIK
        Q + IE  EKV +    KI IEE  SDRNKF   E Q F      G+ LD  +S  E D+FK+ L LKQRLL  F+    E   G FL  K
Subjt:  QMEAIEIAEKVSDRNKFKIEIEEKESDRNKF---ESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLLSRFRLAIGEAVSGCFLVIK

TrEMBL top hitse value%identityAlignment
A0A5A7T9S8 Clip-associated protein5.45e-0472.73Show/hide
Query:  VFGVSSSVGSALDGYQSLGEGDSFKNGLELKQR
        +F VSSSVGS LDGYQS  E D+FK+GLEL+QR
Subjt:  VFGVSSSVGSALDGYQSLGEGDSFKNGLELKQR

A0A5A7TIV9 Uncharacterized protein3.13e-0445.05Show/hide
Query:  QMEAIEIAEKVSDRNKFKIEIEEKESDRNKF---ESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLLSRFRLAIGEAVSGCFLVIK
        Q + IE  EKV +    KI IEE  SDRNKF   E Q F      G+ LD  +S  E D+FK+ L LKQRLL  F+    E   G FL  K
Subjt:  QMEAIEIAEKVSDRNKFKIEIEEKESDRNKF---ESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLLSRFRLAIGEAVSGCFLVIK

A0A5D3BNY3 Gamma-tubulin complex component9.30e-0668.89Show/hide
Query:  TDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQV
        T +K  E +VQ + IEI EKVSDRNKFKI+ EEKESDRNKFE  V
Subjt:  TDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQV

A0A5D3E073 Transposon Tf2-1 polyprotein isoform X14.81e-0445.05Show/hide
Query:  QMEAIEIAEKVSDRNKFKIEIEEKESDRNKF---ESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLLSRFRLAIGEAVSGCFLVIK
        Q + IE  EKV +    KI IEE  SDRNKF   E Q F      G+ LD  +S  E D+FK+ L LKQRLL  F+    E   G FL  K
Subjt:  QMEAIEIAEKVSDRNKFKIEIEEKESDRNKF---ESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLLSRFRLAIGEAVSGCFLVIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATATCGGTGATGATGAGCACAGTCGACGGAGGAAGGACACCGATAAAAAGAATCGAGAACGAAAAGTACAAATGGAGGCAATAGAAATTGCAGAAAAGGTGAG
TGATCGAAACAAGTTCAAAATAGAAATTGAAGAGAAAGAGAGCGATCGAAACAAGTTCGAGTCGCAAGTGTTTGGCGTAAGTAGTTCTGTTGGAAGTGCTTTAGATGGTT
ATCAATCATTGGGGGAAGGCGATTCATTCAAGAATGGGTTGGAATTGAAGCAGAGGTTGTTATCTCGTTTCCGTTTAGCGATAGGAGAAGCTGTCAGCGGATGCTTCTTA
GTAATCAAACAATTAGGAAATCATCGTGGAAGGTTAGGCGATAATTATTGGAGGGATCCGAAACAAAGACTCGAGTAA
mRNA sequenceShow/hide mRNA sequence
GAGGGAGAAGATTTTGGTGAAGATTGGTATCAGAGCATCAAACCTGGAAAACAGAGAGAAATGATGAAGAAGATCGAAGAGACTTTGAGGTCCTTGGCACAGGCGATTGA
TCTAAGGGGGATTCAAATCCAGGAAAACCATCCGTGGTTGTTAAAGGAGAGTTGAAATAACCAAGGAAGAAGCAAAAAGGAGAGAAATCGAAGAAGCAAAAAGAAGAGAA
ACCTAACTAATCAAATATATTGAAGACATTATTCATGAGAAATCTAAAACGAGCGAAACAGAAGATTCATTCAGCCGAATAAAGATGAGTTAGAATAAGGAAGAGCAAGG
AGAAGCATCGATACTTTAAATAATTGGGGGATCGAAGATGAGCAAGAAGGTTACAGAGAAGTTAGAGAATTAAGCCAAAAGGCAACAATGACAAATATCGGTGATGATGA
GCACAGTCGACGGAGGAAGGACACCGATAAAAAGAATCGAGAACGAAAAGTACAAATGGAGGCAATAGAAATTGCAGAAAAGGTGAGTGATCGAAACAAGTTCAAAATAG
AAATTGAAGAGAAAGAGAGCGATCGAAACAAGTTCGAGTCGCAAGTGTTTGGCGTAAGTAGTTCTGTTGGAAGTGCTTTAGATGGTTATCAATCATTGGGGGAAGGCGAT
TCATTCAAGAATGGGTTGGAATTGAAGCAGAGGTTGTTATCTCGTTTCCGTTTAGCGATAGGAGAAGCTGTCAGCGGATGCTTCTTAGTAATCAAACAATTAGGAAATCA
TCGTGGAAGGTTAGGCGATAATTATTGGAGGGATCCGAAACAAAGACTCGAGTAAAAAAGAAATTGTTGTTCAAGGAAACAAAAAATGGTTGGTTGTGATGGAGAATGAA
GTCGTTGGAAGTTGTTTGGTTTAATTTCAATGGGAAAAGAAGACAGCTACGACAGTCGTTTGGATGTGAAGGAAAAAGAAAACGTCGACAAGTGGTGGTTTACTGTGGTC
CGAGGAAGTGATTGGGAATATGAGTGAATCGTGTGAGGAAGAAGAAGTTGCACATGTCAGGATGCCAATTACGTAGTAGAAAGTGATAGGAAAGAAGATTAGGACAA
Protein sequenceShow/hide protein sequence
MTNIGDDEHSRRRKDTDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQRLLSRFRLAIGEAVSGCFL
VIKQLGNHRGRLGDNYWRDPKQRLE