; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy2G005640 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy2G005640
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTF-B3 domain-containing protein
Genome locationGy14Chr2:3934009..3934671
RNA-Seq ExpressionCsGy2G005640
SyntenyCsGy2G005640
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]1.06e-10772.29Show/hide
Query:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSIS-------ILNKQPPILIERAPVVNEALPNNNNNEN------VAGRD
        MVKV Y YNNKIV+K VYEA LALC MK S   +PFE+P     N+F SSTSIS       ++N+QPPI+ E APVVNEAL NNNNN N      VA RD
Subjt:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSIS-------ILNKQPPILIERAPVVNEALPNNNNNEN------VAGRD

Query:  WGRVPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNN
         GR+PPMAVIQNIIGECSPPFVKQL KTDVT+SQGRLALHKEFV RNL+PMFN  E L NGISVTVYDSEGREYDM F+ WTSKLYVLTKSW KFY  N 
Subjt:  WGRVPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNN

Query:  LTRPGEFISVWMFRHVVNRKLCFAIMRGDAE
        LTRP EFI++WMFRHVVN KLCFAIMRG+ E
Subjt:  LTRPGEFISVWMFRHVVNRKLCFAIMRGDAE

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]5.73e-5646.32Show/hide
Query:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCL---KPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNNNNENVA--GRDWGRV----
        MV+V Y +NN+I+EK VYE +          CL   + F +P    + + S STS  + ++            NEA P+ N +E+VA    +   V    
Subjt:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCL---KPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNNNNENVA--GRDWGRV----

Query:  --PPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLT
          P +AVI NIIG  SPP+ K+L K+DV+E QGRL + KEFVT +L+PMFN  E+   GI VTVY+ EGR+YDM FK W SKLYVLTK WN FYK+NNLT
Subjt:  --PPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLT

Query:  RPGEFISVWMFRHVVNRKLCFAIMRGDAEQP
         PG ++++WMFRHV   K+CFA+  G   +P
Subjt:  RPGEFISVWMFRHVVNRKLCFAIMRGDAEQP

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.24e-5160Show/hide
Query:  VPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTR
        +P +AVI NIIG  SPP+ K+L K+DV+E QGRL + KEFVT +L+PMFN  E+   GI VTVY+ EGR+YDM FK W SKLYVLTK WN FYK+NNLT 
Subjt:  VPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTR

Query:  PGEFISVWMFRHVVNRKLCFAIMRGDAEQP
        PG ++++WMFRHV   K+CFA+  G   +P
Subjt:  PGEFISVWMFRHVVNRKLCFAIMRGDAEQP

KGN56101.1 hypothetical protein Csa_010492 [Cucumis sativus]1.61e-10470.35Show/hide
Query:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNN----NNENVA-----GRDWGRV
        MV V YTYNNKIV + VY+ASL L  M  S+ ++PFE+P+ R NN+ SS TS S++N+Q P++ E APVVNE LPNN+    NNENVA     GRD GR 
Subjt:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNN----NNENVA-----GRDWGRV

Query:  PPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRP
        PPMAVIQNIIGECSPPFVKQL KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SKLYVLTKSW +FYK+N+LT+P
Subjt:  PPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRP

Query:  GEFISVWMFRHVVNRKLCFAIMRGDA
        GEFISVWMFRHVV +KLCFAIMRG A
Subjt:  GEFISVWMFRHVVNRKLCFAIMRGDA

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]1.60e-15497.31Show/hide
Query:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNNNNENVA----GRDWGRVPPMAV
        MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAP+VNEALPNNNN ENVA    GRDWGRVPPMAV
Subjt:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNNNNENVA----GRDWGRVPPMAV

Query:  IQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFIS
        IQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFIS
Subjt:  IQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFIS

Query:  VWMFRHVVNRKLCFAIMRGDAEQ
        VWMFRHVVNRKLCFAIMRGDAEQ
Subjt:  VWMFRHVVNRKLCFAIMRGDAEQ

TrEMBL top hitse value%identityAlignment
A0A0A0L7L0 TF-B3 domain-containing protein7.81e-10570.35Show/hide
Query:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNN----NNENVA-----GRDWGRV
        MV V YTYNNKIV + VY+ASL L  M  S+ ++PFE+P+ R NN+ SS TS S++N+Q P++ E APVVNE LPNN+    NNENVA     GRD GR 
Subjt:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNN----NNENVA-----GRDWGRV

Query:  PPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRP
        PPMAVIQNIIGECSPPFVKQL KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SKLYVLTKSW +FYK+N+LT+P
Subjt:  PPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRP

Query:  GEFISVWMFRHVVNRKLCFAIMRGDA
        GEFISVWMFRHVV +KLCFAIMRG A
Subjt:  GEFISVWMFRHVVNRKLCFAIMRGDA

A0A0A0LC65 TF-B3 domain-containing protein5.85e-87100Show/hide
Query:  MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGE
        MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGE
Subjt:  MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGE

Query:  FISVWMFRHVVNRKLCFAIMRGDAEQ
        FISVWMFRHVVNRKLCFAIMRGDAEQ
Subjt:  FISVWMFRHVVNRKLCFAIMRGDAEQ

A0A4Y1RVH6 AP2/B3-like transcriptional factor family protein6.51e-3347.54Show/hide
Query:  VPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTR
        +PP+  +QN+I +CS PF KQL ++DV E Q RL+++KE V  N++P+   G+NL  GI VT YD  G EY M+FK W +K++VLT  W  F     L  
Subjt:  VPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTR

Query:  PGEFISVWMFRHVVNRKLCFAI
          +F+++W+FRHV N  LCFAI
Subjt:  PGEFISVWMFRHVVNRKLCFAI

A0A5D3BAS8 Putative B3 domain-containing protein5.14e-10872.29Show/hide
Query:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSIS-------ILNKQPPILIERAPVVNEALPNNNNNEN------VAGRD
        MVKV Y YNNKIV+K VYEA LALC MK S   +PFE+P     N+F SSTSIS       ++N+QPPI+ E APVVNEAL NNNNN N      VA RD
Subjt:  MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSIS-------ILNKQPPILIERAPVVNEALPNNNNNEN------VAGRD

Query:  WGRVPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNN
         GR+PPMAVIQNIIGECSPPFVKQL KTDVT+SQGRLALHKEFV RNL+PMFN  E L NGISVTVYDSEGREYDM F+ WTSKLYVLTKSW KFY  N 
Subjt:  WGRVPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNN

Query:  LTRPGEFISVWMFRHVVNRKLCFAIMRGDAE
        LTRP EFI++WMFRHVVN KLCFAIMRG+ E
Subjt:  LTRPGEFISVWMFRHVVNRKLCFAIMRGDAE

A0A6J1CTE7 putative B3 domain-containing protein At4g031703.66e-4540.34Show/hide
Query:  NNKIVEKHVYEASLALCHMKNS------------------RCLKPFEKPVTR---LNNRFSSSTSISILNKQPPILIERAPVVNEALPNNNNNENVAGRD
        N K  +  VYEA++ L  M  S                  + +  F+KP  +   +N+   ++ ++++  ++ P       V  EA P+  NN N  G +
Subjt:  NNKIVEKHVYEASLALCHMKNS------------------RCLKPFEKPVTR---LNNRFSSSTSISILNKQPPILIERAPVVNEALPNNNNNENVAGRD

Query:  WGRVPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNR---GENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYK
           +PP+  I+++IG+CS  + K+L  +DV E+QGRLA+ KEFVT+ L PMFN     ENL+ GI VTVY+ EGRE+ M FK W SKLYVL K W  F K
Subjt:  WGRVPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNR---GENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYK

Query:  SNNLTRP--GEFISVWMFRHVVNRKLCFAIMRG
        +NNLT    GEF+++WMFRH     LCFAI+ G
Subjt:  SNNLTRP--GEFISVWMFRHVVNRKLCFAIMRG

SwissProt top hitse value%identityAlignment
Q9LM90 B3 domain-containing protein At1g206008.8e-1036.56Show/hide
Query:  SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFIS
        S P  KQLM +DV   Q RL L KE V   ++P     E+   G+ V+VY  +G    M FK W   K  VLT  W +F     L +  +F++
Subjt:  SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFIS

Q9ZR14 Putative B3 domain-containing protein At4g031708.0e-1944.04Show/hide
Query:  SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHV
        S P  KQLM +DV + Q  L L KE V   ++P     EN   GI V+VY  +G+   M FK W   K  VLT  W +F +   L+   +F++VWMFRH+
Subjt:  SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHV

Query:  VNRKLCFAI
          RKLCFAI
Subjt:  VNRKLCFAI

Q9ZR15 Putative B3 domain-containing protein At4g031601.2e-1439.42Show/hide
Query:  KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENL-KNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKL
        +QLM +DV ++Q RL L KE V + ++    + E L   G++V+VY   G  + M+ K W     VLT  W  F KS  L +  +F+++WMFRH   R++
Subjt:  KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENL-KNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKL

Query:  CFAI
        CFAI
Subjt:  CFAI

Arabidopsis top hitse value%identityAlignment
AT1G20600.1 AP2/B3-like transcriptional factor family protein6.3e-1136.56Show/hide
Query:  SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFIS
        S P  KQLM +DV   Q RL L KE V   ++P     E+   G+ V+VY  +G    M FK W   K  VLT  W +F     L +  +F++
Subjt:  SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFIS

AT4G03160.1 BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1)8.4e-1639.42Show/hide
Query:  KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENL-KNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKL
        +QLM +DV ++Q RL L KE V + ++    + E L   G++V+VY   G  + M+ K W     VLT  W  F KS  L +  +F+++WMFRH   R++
Subjt:  KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENL-KNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKL

Query:  CFAI
        CFAI
Subjt:  CFAI

AT4G03170.1 AP2/B3-like transcriptional factor family protein5.7e-2044.04Show/hide
Query:  SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHV
        S P  KQLM +DV + Q  L L KE V   ++P     EN   GI V+VY  +G+   M FK W   K  VLT  W +F +   L+   +F++VWMFRH+
Subjt:  SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHV

Query:  VNRKLCFAI
          RKLCFAI
Subjt:  VNRKLCFAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAGGTACGATACACTTACAATAACAAAATAGTTGAAAAGCACGTATATGAAGCATCTTTGGCTCTTTGTCACATGAAAAATAGTAGATGTTTGAAACCA
TTTGAGAAACCGGTAACTCGTTTAAACAATCGATTTTCAAGTTCAACTTCCATTTCTATACTCAACAAACAACCTCCGATACTCATTGAACGTGCTCCGGTAGTC
AATGAAGCTTTACCCAACAACAACAACAATGAAAATGTGGCTGGTAGAGATTGGGGTAGAGTTCCGCCAATGGCAGTGATTCAGAACATAATTGGAGAGTGCAGT
CCACCTTTTGTGAAGCAATTGATGAAAACAGATGTGACAGAAAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGACTCGTAATTTGATTCCAATGTTCAAT
AGAGGTGAGAATTTGAAGAATGGAATTAGTGTTACGGTTTATGATAGTGAAGGAAGAGAATACGACATGATATTCAAGTTTTGGACTTCTAAACTTTATGTGCTA
ACGAAAAGTTGGAATAAGTTTTACAAGAGCAATAATTTGACGCGTCCCGGTGAGTTTATTAGTGTTTGGATGTTTCGACACGTCGTCAATCGTAAACTTTGCTTT
GCTATTATGAGAGGAGATGCTGAACAACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAGGTACGATACACTTACAATAACAAAATAGTTGAAAAGCACGTATATGAAGCATCTTTGGCTCTTTGTCACATGAAAAATAGTAGATGTTTGAAACCA
TTTGAGAAACCGGTAACTCGTTTAAACAATCGATTTTCAAGTTCAACTTCCATTTCTATACTCAACAAACAACCTCCGATACTCATTGAACGTGCTCCGGTAGTC
AATGAAGCTTTACCCAACAACAACAACAATGAAAATGTGGCTGGTAGAGATTGGGGTAGAGTTCCGCCAATGGCAGTGATTCAGAACATAATTGGAGAGTGCAGT
CCACCTTTTGTGAAGCAATTGATGAAAACAGATGTGACAGAAAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGACTCGTAATTTGATTCCAATGTTCAAT
AGAGGTGAGAATTTGAAGAATGGAATTAGTGTTACGGTTTATGATAGTGAAGGAAGAGAATACGACATGATATTCAAGTTTTGGACTTCTAAACTTTATGTGCTA
ACGAAAAGTTGGAATAAGTTTTACAAGAGCAATAATTTGACGCGTCCCGGTGAGTTTATTAGTGTTTGGATGTTTCGACACGTCGTCAATCGTAAACTTTGCTTT
GCTATTATGAGAGGAGATGCTGAACAACCGTGA
Protein sequenceShow/hide protein sequence
MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNNNNENVAGRDWGRVPPMAVIQNIIGECS
PPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCF
AIMRGDAEQP