CuGenDBv2

Gene ID	CsGy2G006090
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Chlorophyll A-B binding protein
Genome location	Gy14Chr2:4426367..4432263
RNA-Seq Expression	CsGy2G006090
Synteny	CsGy2G006090
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0055599.1 uncharacterized protein E6C27_scaffold222G00820 [Cucumis melo var. makuwa]

1.71e-83

86.25

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Query:  MAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSRD   GRST RTRGQAFRISNVSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
Subjt:  MAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTRL
        RRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQVKSYSLLTF LTL     FPFL   ++
Subjt:  RRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTRL

XP_008451793.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo]

1.67e-90

85.37

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Query:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPL
        MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSRD   GRST RTRGQAFRISNVSP +DGLIKQVIMVDPL
Subjt:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y  +  N
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN

XP_011648927.1 uncharacterized protein LOC101212671 [Cucumis sativus]

2.04e-102

95.06

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Query:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEA
        MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEA
Subjt:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEA

Query:  KRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN
        KRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQ+  Y  +  N
Subjt:  KRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN

XP_016902490.1 PREDICTED: uncharacterized protein LOC103492970 isoform X2 [Cucumis melo]

2.60e-80

79.88

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Query:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPL
        MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSRD   GRST RTRGQAFRISNV           IMVDPL
Subjt:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y  +  N
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN

XP_038889814.1 uncharacterized protein LOC120079625 [Benincasa hispida]

2.37e-71

84.29

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Query:  ASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQ
        AST+LILPI GGNLPPSQYLSFRHT PSATFSR GWSRD   GRST RTRGQAF+ISNVSPG+D LIKQVIMVDPLEAKR+AAKEMEKIKAKEKFKR+RQ
Subjt:  ASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQ

Query:  IEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN
        IEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y     N
Subjt:  IEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH95 Uncharacterized protein

9.86e-103

95.06

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Query:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEA
        MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEA
Subjt:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEA

Query:  KRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN
        KRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQ+  Y  +  N
Subjt:  KRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN

A0A1S3BSE0 uncharacterized protein LOC103492970 isoform X1

8.08e-91

85.37

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Query:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPL
        MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSRD   GRST RTRGQAFRISNVSP +DGLIKQVIMVDPL
Subjt:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y  +  N
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN

A0A1S4E3D1 uncharacterized protein LOC103492970 isoform X2

1.26e-80

79.88

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Query:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPL
        MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSRD   GRST RTRGQAFRISNV           IMVDPL
Subjt:  MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPL

Query:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN
        EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y  +  N
Subjt:  EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN

A0A5A7UQ54 Uncharacterized protein

8.27e-84

86.25

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Query:  MAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSRD   GRST RTRGQAFRISNVSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
Subjt:  MAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTRL
        RRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQVKSYSLLTF LTL     FPFL   ++
Subjt:  RRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTRL

A0A6J1I0N1 uncharacterized protein LOC111468645 isoform X1

4.16e-63

77.62

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Query:  ASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRI---SNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        ASTALILPI+GGN   SQ LSFRHT  SATFSR GWSRD   G ST RTRGQAFRI    NVSPG+D LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFKR
Subjt:  ASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRI---SNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN
        RRQIEAINGAWAMIGLTAGL++EG+TGKGILAQ+  Y     N
Subjt:  RRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G28025.1 unknown protein

5.2e-22

53.39

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Query:  RHTLPSATFSR-LGWSRDAGRSTRRTRGQAFRI---SNVS----PGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAG
        R  +PS++  + L   +DA     R R    R+    NVS    PG+  + K+VIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGAWA+IGL  G
Subjt:  RHTLPSATFSR-LGWSRDAGRSTRRTRGQAFRI---SNVS----PGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAG

Query:  LVIEGRTGKGILAQVKSY
        LVIE +TGKGILAQ+  Y
Subjt:  LVIEGRTGKGILAQVKSY

AT4G28025.2 unknown protein.

6.8e-22

51.97

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Query:  PPSQYLSFRHTLPSATFSRLGWSR--DAGRSTRRTRGQAFRI---SNVS----PGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGA
        PP  +L       S++  R G  R  DA     R R    R+    NVS    PG+  + K+VIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGA
Subjt:  PPSQYLSFRHTLPSATFSRLGWSR--DAGRSTRRTRGQAFRI---SNVS----PGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGA

Query:  WAMIGLTAGLVIEGRTGKGILAQVKSY
        WA+IGL  GLVIE +TGKGILAQ+  Y
Subjt:  WAMIGLTAGLVIEGRTGKGILAQVKSY

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTGGGCATCTCAAATCTATAAATGGATAAGCATTCATGCAGGAAGGCGTTGCACTTTGGACATGGCTGCTGCTTCCACTGCGCTGATTCTCCCCATCAATGGAGGAAA
CCTTCCGCCTTCCCAATACCTCTCTTTTCGCCATACTCTCCCTTCTGCTACTTTCTCCAGGTTGGGTTGGAGTAGGGATGCTGGCAGAAGTACTCGTAGAACGAGGGGTC
AAGCATTTCGAATCTCTAATGTCTCGCCTGGTAGGGATGGATTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCGAAAGAAATGGAAAAG
ATCAAAGCAAAAGAGAAGTTCAAGAGAAGACGTCAAATAGAAGCAATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCGAACCGGAAA
AGGAATTCTAGCCCAGGTGAAAAGTTATAGCCTCTTGACATTTAATTTAACCCTGTGTCCCCCTTGTTGTTTCCCCTTCTTACCTTCAACAAGGTTATACTGGTTTAGAA
CATTTGTTGATTCCTTTATATGA

mRNA sequence

Show/hide mRNA sequence

CAAATTTAAATGAGTAAAGCGACTGAAAATTTAGGGGAAAGCACAATTTCGAGTCAACCAATTCAATTTCATTTCATTCTAATATGGTGGAGGCAAGCAATATTAGATAT
ATCCGTTTGATTGGATTAGAACAAGCTCTGTACAGCCATCAGTGAGCGTCATTGCACAAATGTCATTCTCTATAAGATAATGTGTTGATGTGGGCATCTCAAATCTATAA
ATGGATAAGCATTCATGCAGGAAGGCGTTGCACTTTGGACATGGCTGCTGCTTCCACTGCGCTGATTCTCCCCATCAATGGAGGAAACCTTCCGCCTTCCCAATACCTCT
CTTTTCGCCATACTCTCCCTTCTGCTACTTTCTCCAGGTTGGGTTGGAGTAGGGATGCTGGCAGAAGTACTCGTAGAACGAGGGGTCAAGCATTTCGAATCTCTAATGTC
TCGCCTGGTAGGGATGGATTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCGAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAA
GAGAAGACGTCAAATAGAAGCAATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCGAACCGGAAAAGGAATTCTAGCCCAGGTGAAAA
GTTATAGCCTCTTGACATTTAATTTAACCCTGTGTCCCCCTTGTTGTTTCCCCTTCTTACCTTCAACAAGGTTATACTGGTTTAGAACATTTGTTGATTCCTTTATATGA
TTGGGAGTGTTAACTTAAAAAACTTGGAAAAATTATTAACTACCAAATTTTATAAGGTTAGGAGGTAGTCTCCATTTTTCATTTGAGTGAACATGGAGGTGGAAGCTTCA
TCACATGTTGAAGGGTTGGACAAAAGTAACCGGGTTTTAAAGCTTTTGACTCTAATAATTAGTAACCTCTTTTGTCTCTCAGTTTTAGGCTCCCTAAGCTATTTAGGATA
AAATATTTTCGAGCTTCTCTTCTCTTTCTATCCTAGAGGTTGGTGTTCGATGTTTGAGGAGGTGCTCTTGAATCCTCCTTAAAGTTTCTTTGTTTGGTCTTCTTTATTTG
ATTTGTTGTTGAGCATGTGGCTTGAGAAGAACAGTAGCTTTTTTTCAATAGGTGGAGTGGTTTGGAAAGGATCTTTGGGATTTGATTAGGCTTAATTGCTATCGTGGGCG
TTAATAACGCTTTTGTTTGTTTGTTTGTTTTGTTTTGTGTTGTAAATATAGCTTACCATTATTCTTATGGATTGAATTCCTTTCTATAATTGGGTGTGAGTGTTGTTTTG
TTTTGGCTTATTTTTGTACATCTTTCTGTATCCTTTCATCTTTCTCACTGAGTGGTTTTTTTATTTAAAGAAAATGTAGATAATAGTCTTTTATTGGGTTTTGAACTTTT
AGAAATTTAGGACTCATCGATTATGTTTCCTTCTTTCGAGTTTTCTTTTGGTAGCCTTCAGTTTTCTGTTTTTGGTTTCTGCCACCACCATTTTCTTTTCTTTCTAATCT
ACCCGAATTTTAAAAGGAGAGCAGTTATCAAAAGTATAGCTTTTGTTAATCTCTCTAAGCTTTCAAATAAGTTTCCATGAAATAGGAAACAATCTTAGTTTTGAAAGGAG
CTATACAGAACATAGCTTTTGTTTTTAAGTATGTGTAAGTTTTCAAGTTTCCATAAAAACAGTAAACAAGCTTAGTTTTTATAAACAAAGAAACTAAAAATGAAAACATA
ACATTACAGTATATAGATATGTGATGCGATGTGATGACCAATGTGTGTTATTTTCCAGTTACTGTGTTCCATGAACCGTGAACAAGCTTTAGTGAAAATGTAACACTACG
GTCTATATAGATCCGGAGATGTGATGACCAACATGTGTATAGCCCAATAATCCAATATTATGTTTTTTCTTCGCTTATTTTTCAGTTGGCTGACTACTTCAGCATCCTTA
TCAACTTCTTCATACGGTAAGAGGCATCTCCGAGGGGAAAAGGAGATCTTTGAATGAAAGAGGTATTCTCTTGTCGACCCTTGAAAATTTAGCATGTTAAGAACATTTTC
AAGCAAGTCATTGCTTGTTTGCTGTAAAAAAAAATCTGGTGTTGAGGATATTCTCTTCTCCTTTGAAGTCTAATTTGATTTCTTCACATTTCATATACAAAGATTTTCAT
TTAATTGTGAAGGCGGTGAGATGAAGCAGCAGGTTCATGGTACTTTGTTTTGAAGATTCTATTTGCAATACAATTATATGTACTACCATTTGTTTTTTTAAAAATCAGTA
CAAGATTTCATTTCCAAGGAGAGGAAAAACCACCATAGTTCTGTACAATTATTTGGTGAAAAGAAGCTTGTCTCTTTTTTTTAAAAGAAAAAGAAATAGACTGTCGTTGT
CTATAAGCTGATTCATCTTCCAATATTTGCAAACAACAGCGTTGTAATGTAAGCATAGATTAGAATTCAGATGAAAATTCAGATGAATTAGCTTTGATGATTCTTCTATT
GAATTCCTGTTATTGTTGGTTACCTTCCAAAATGTCTTCCTTAGAGATCTCTTCTCATGGTAAGTACACTTGTGGAGTGTTTGTTGAAGAATGGAATTTGGGAGGGAAAA
ACTTTGAGTTTTTAATAG

Protein sequence

Show/hide protein sequence

MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEK
IKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTRLYWFRTFVDSFI

CsGy2G006090 (gene) of Cucumber (Gy14) v2.1 genome