CuGenDBv2

Gene ID	CsGy2G006240
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	50S ribosomal protein L2, chloroplastic
Genome location	Gy14Chr2:4563471..4563767
RNA-Seq Expression	CsGy2G006240
Synteny	CsGy2G006240
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0009507 - chloroplast (cellular component) GO:0015934 - large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR002171 - Ribosomal protein L2 IPR012340 - Nucleic acid-binding, OB-fold IPR022666 - Ribosomal Proteins L2, RNA binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

QGA84950.1 ribosomal protein L2, partial [Albizia adianthifolia]

1.35e-47

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

QGA84959.1 ribosomal protein L2, partial [Entada rheedei]

1.40e-47

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

QGA84962.1 ribosomal protein L2, partial [Faidherbia albida]

7.49e-48

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

QGA84973.1 ribosomal protein L2, partial [Pentaclethra macrophylla]

4.06e-48

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

QGA84976.1 ribosomal protein L2, partial [Pithecellobium dulce]

4.72e-48

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

TrEMBL top hits

e value

%identity

Alignment

A0A5Q0UTY0 Ribosomal protein L2 (Fragment)

3.62e-48

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

A0A5Q0UTZ9 Ribosomal protein L2 (Fragment)

1.96e-48

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

A0A5Q0UU16 Ribosomal protein L2 (Fragment)

2.28e-48

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

A0A5Q0UUG0 Ribosomal protein L2 (Fragment)

6.55e-48

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

A0A5Q0UUV8 Ribosomal protein L2 (Fragment)

6.76e-48

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

SwissProt top hits

e value

%identity

Alignment

A9L9D7 50S ribosomal protein L2, chloroplastic

1.7e-37

94.87

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVD +VKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

Q09MB2 50S ribosomal protein L2, chloroplastic

1.5e-38

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

Q0ZIX7 50S ribosomal protein L2, chloroplastic

1.3e-37

96.15

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

Q332R5 50S ribosomal protein L2, chloroplastic

1.7e-37

94.87

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDS+VKSNPRNNLIYGQH CGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

Q4VZK5 50S ribosomal protein L2, chloroplastic

1.5e-38

97.44

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

Arabidopsis top hits

e value

%identity

Alignment

ATCG00830.1 ribosomal protein L2

1.9e-36

92.31

Show/hide

Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLYRKIDFRRN KDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

ATCG01310.1 ribosomal protein L2

1.9e-36

92.31

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Query:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT
        MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLYRKIDFRRN KDIYGR +T
Subjt:  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSIT

Sequences

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CDS sequence

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ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTG
TGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATG
GTAGAAGCATAACGGCCCTATTGTTCCTATGGAGAGAAGAACCTATGATTAGCTTTTCGGGAAATTTCCAAACATAA

mRNA sequence

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Protein sequence

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MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRSITALLFLWREEPMISFSGNFQT

CsGy2G006240 (gene) of Cucumber (Gy14) v2.1 genome